RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 ENGP17813 658 aa13.9□□□□□ -0.18
HLA-F-219ENST00000429294 PTGER3P43115 390 aa13.9□□□□□ -0.18
HLA-F-219ENST00000429294 CACNA2D1P54289 1103 aa13.9□□□□□ -0.18
HLA-F-219ENST00000429294 GFPT1Q06210 699 aaPredicted RBP13.9□□□□□ -0.18
HLA-F-219ENST00000429294 GOLGA8FQ08AF8 430 aa13.9□□□□□ -0.18
HLA-F-219ENST00000429294 GOLGA8DPQ0D2H9 430 aa13.9□□□□□ -0.18
HLA-F-219ENST00000429294 DUOXA1Q1HG43 343 aa13.9□□□□□ -0.18
HLA-F-219ENST00000429294 ZNF699Q32M78 642 aa13.9□□□□□ -0.18
HLA-F-219ENST00000429294 MAP7D1Q3KQU3 841 aa13.9□□□□□ -0.18
HLA-F-219ENST00000429294 ZNF667Q5HYK9 610 aa13.9□□□□□ -0.18
HLA-F-219ENST00000429294 C10orf76Q5T2E6 689 aa13.9□□□□□ -0.18
HLA-F-219ENST00000429294 CNNM4Q6P4Q7 775 aa13.9□□□□□ -0.18
HLA-F-219ENST00000429294 UNC13DQ70J99 1090 aa13.9□□□□□ -0.18
HLA-F-219ENST00000429294 C12orf40Q86WS4 652 aa13.9□□□□□ -0.18
HLA-F-219ENST00000429294 SFTPA1Q8IWL2 248 aa13.9□□□□□ -0.18
HLA-F-219ENST00000429294 NAT16Q8N8M0 369 aa13.9□□□□□ -0.18
HLA-F-219ENST00000429294 LINC00301Q8NCQ3 95 aa13.9□□□□□ -0.18
HLA-F-219ENST00000429294 GOLGA5Q8TBA6 731 aa13.9□□□□□ -0.18
HLA-F-219ENST00000429294 SMARCD1Q96GM5 515 aa13.9□□□□□ -0.18
HLA-F-219ENST00000429294 XPO6Q96QU8 1125 aaKnown RBP13.9□□□□□ -0.18
HLA-F-219ENST00000429294 KCNK16Q96T55 309 aa13.9□□□□□ -0.18
HLA-F-219ENST00000429294 C7orf25Q9BPX7 421 aa13.9□□□□□ -0.18
HLA-F-219ENST00000429294 FBXO44Q9H4M3 255 aa13.9□□□□□ -0.18
HLA-F-219ENST00000429294 ZMIZ1Q9ULJ6 1067 aa13.9□□□□□ -0.18
HLA-F-219ENST00000429294 MTMR6Q9Y217 621 aa13.9□□□□□ -0.18
HLA-F-219ENST00000429294 ZZEF1O43149 2961 aa13.9□□□□□ -0.18
HLA-F-219ENST00000429294 ZFHX4Q86UP3 3567 aa13.9□□□□□ -0.18
HLA-F-219ENST00000429294 HOXC11O43248 304 aaPredicted RBP13.89□□□□□ -0.19
HLA-F-219ENST00000429294 CUTAO60888 179 aa13.89□□□□□ -0.19
HLA-F-219ENST00000429294 ADAM23O75077 832 aa13.89□□□□□ -0.19
HLA-F-219ENST00000429294 TULP3O75386 442 aa13.89□□□□□ -0.19
HLA-F-219ENST00000429294 HOXB2P14652 356 aa13.89□□□□□ -0.19
HLA-F-219ENST00000429294 NTSR1P30989 418 aa13.89□□□□□ -0.19
HLA-F-219ENST00000429294 SLC5A3P53794 718 aa13.89□□□□□ -0.19
HLA-F-219ENST00000429294 RPL6Q02878 288 aaKnown RBP13.89□□□□□ -0.19
HLA-F-219ENST00000429294 MESP2Q0VG99 397 aa13.89□□□□□ -0.19
HLA-F-219ENST00000429294 E2F4Q16254 413 aa13.89□□□□□ -0.19
HLA-F-219ENST00000429294 SNX30Q5VWJ9 437 aa13.89□□□□□ -0.19
HLA-F-219ENST00000429294 SLC23A3Q6PIS1 610 aa13.89□□□□□ -0.19
HLA-F-219ENST00000429294 FAM35AQ86V20 835 aa13.89□□□□□ -0.19
HLA-F-219ENST00000429294 KDF1Q8NAX2 398 aaPredicted RBP13.89□□□□□ -0.19
HLA-F-219ENST00000429294 SCAMP5Q8TAC9 235 aa13.89□□□□□ -0.19
HLA-F-219ENST00000429294 SCFD1Q8WVM8 642 aa13.89□□□□□ -0.19
HLA-F-219ENST00000429294 DUSP9Q99956 384 aaKnown RBP13.89□□□□□ -0.19
HLA-F-219ENST00000429294 SCNM1Q9BWG6 230 aa13.89□□□□□ -0.19
HLA-F-219ENST00000429294 SPHK2Q9NRA0 654 aa13.89□□□□□ -0.19
HLA-F-219ENST00000429294 TMEM30AQ9NV96 361 aa13.89□□□□□ -0.19
HLA-F-219ENST00000429294 TFIP11Q9UBB9 837 aaKnown RBP13.89□□□□□ -0.19
HLA-F-219ENST00000429294 SLC6A14Q9UN76 642 aa13.89□□□□□ -0.19
HLA-F-219ENST00000429294 NME7Q9Y5B8 376 aa13.89□□□□□ -0.19
HLA-F-219ENST00000429294 ANKRD11Q6UB99 2663 aaPredicted RBP13.88□□□□□ -0.19
HLA-F-219ENST00000429294 OPHN1O60890 802 aa13.88□□□□□ -0.19
HLA-F-219ENST00000429294 ZNF217O75362 1048 aa13.88□□□□□ -0.19
HLA-F-219ENST00000429294 AP1G2O75843 785 aa13.88□□□□□ -0.19
HLA-F-219ENST00000429294 IRF1P10914 325 aa13.88□□□□□ -0.19
HLA-F-219ENST00000429294 SPINK2P20155 84 aa13.88□□□□□ -0.19
HLA-F-219ENST00000429294 ITPKAP23677 461 aa13.88□□□□□ -0.19
HLA-F-219ENST00000429294 NCOA4Q13772 614 aa13.88□□□□□ -0.19
HLA-F-219ENST00000429294 KNOP1Q1ED39 458 aaKnown RBP13.88□□□□□ -0.19
HLA-F-219ENST00000429294 GRAMD4Q6IC98 578 aa13.88□□□□□ -0.19
HLA-F-219ENST00000429294 BBS7Q8IWZ6 715 aa13.88□□□□□ -0.19
HLA-F-219ENST00000429294 ETFBKMTQ8IXQ9 262 aa13.88□□□□□ -0.19
HLA-F-219ENST00000429294 C12orf56Q8IXR9 622 aa13.88□□□□□ -0.19
HLA-F-219ENST00000429294 CHPFQ8IZ52 775 aa13.88□□□□□ -0.19
HLA-F-219ENST00000429294 TERB1Q8NA31 727 aa13.88□□□□□ -0.19
HLA-F-219ENST00000429294 ZNF516Q92618 1163 aa13.88□□□□□ -0.19
HLA-F-219ENST00000429294 GTPBP2Q9BX10 602 aaKnown RBP13.88□□□□□ -0.19
HLA-F-219ENST00000429294 XYLT2Q9H1B5 865 aa13.88□□□□□ -0.19
HLA-F-219ENST00000429294 SMYD3Q9H7B4 428 aa13.88□□□□□ -0.19
HLA-F-219ENST00000429294 CCSER2Q9H7U1 834 aa13.88□□□□□ -0.19
HLA-F-219ENST00000429294 VRTNQ9H8Y1 702 aa13.88□□□□□ -0.19
HLA-F-219ENST00000429294 ZDHHC4Q9NPG8 344 aa13.88□□□□□ -0.19
HLA-F-219ENST00000429294 TLR8Q9NR97 1041 aaKnown RBP13.88□□□□□ -0.19
HLA-F-219ENST00000429294 KRT82Q9NSB4 513 aa13.88□□□□□ -0.19
HLA-F-219ENST00000429294 TMEM74BQ9NUR3 256 aa13.88□□□□□ -0.19
HLA-F-219ENST00000429294 GMIPQ9P107 970 aa13.88□□□□□ -0.19
HLA-F-219ENST00000429294 WDR35Q9P2L0 1181 aa13.88□□□□□ -0.19
HLA-F-219ENST00000429294 MBD1Q9UIS9 605 aaPredicted RBP13.88□□□□□ -0.19
HLA-F-219ENST00000429294 LSM7Q9UK45 103 aaKnown RBP13.88□□□□□ -0.19
HLA-F-219ENST00000429294 PILRBQ9UKJ0 227 aa13.88□□□□□ -0.19
HLA-F-219ENST00000429294 PKD1L2Q7Z442 2459 aa13.88□□□□□ -0.19
HLA-F-219ENST00000429294 PVALEFA0A1B0GWK0 134 aa13.87□□□□□ -0.19
HLA-F-219ENST00000429294 TLR5O60602 858 aa13.87□□□□□ -0.19
HLA-F-219ENST00000429294 YEATS4O95619 227 aa13.87□□□□□ -0.19
HLA-F-219ENST00000429294 SYPP08247 313 aa13.87□□□□□ -0.19
HLA-F-219ENST00000429294 SERPINF2P08697 491 aa13.87□□□□□ -0.19
HLA-F-219ENST00000429294 CDH8P55286 799 aa13.87□□□□□ -0.19
HLA-F-219ENST00000429294 SIM1P81133 766 aaPredicted RBP13.87□□□□□ -0.19
HLA-F-219ENST00000429294 ZNF33AQ06730 810 aa13.87□□□□□ -0.19
HLA-F-219ENST00000429294 BMT2Q1RMZ1 405 aa13.87□□□□□ -0.19
HLA-F-219ENST00000429294 SCARA5Q6ZMJ2 495 aa13.87□□□□□ -0.19
HLA-F-219ENST00000429294 TMEM25Q86YD3 366 aa13.87□□□□□ -0.19
HLA-F-219ENST00000429294 PHTF2Q8N3S3 785 aa13.87□□□□□ -0.19
HLA-F-219ENST00000429294 FRMD1Q8N878 549 aa13.87□□□□□ -0.19
HLA-F-219ENST00000429294 ZFRQ96KR1 1074 aaKnown RBP13.87□□□□□ -0.19
HLA-F-219ENST00000429294 BBS2Q9BXC9 721 aa13.87□□□□□ -0.19
HLA-F-219ENST00000429294 DNAI2Q9GZS0 605 aa13.87□□□□□ -0.19
HLA-F-219ENST00000429294 SLC39A2Q9NP94 309 aa13.87□□□□□ -0.19
HLA-F-219ENST00000429294 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.87□□□□□ -0.19
HLA-F-219ENST00000429294 FOXD4L1Q9NU39 408 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms