RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 SLC27A5Q9Y2P5 690 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 TDRKHQ9Y2W6 561 aaKnown RBP10.06□□□□□ -0.8
SNX13-203ENST00000428135 BTBD19C9JJ37 291 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 SUPT7LO94864 414 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 SLC2A3P11169 496 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 NTRK3Q16288 839 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 NFIL3Q16649 462 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 ZNF697Q5TEC3 545 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 SLC27A1Q6PCB7 646 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 LENG1Q96BZ8 264 aaPredicted RBP10.06□□□□□ -0.8
SNX13-203ENST00000428135 FAM84AQ96KN4 292 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 GARTP22102 1010 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 PLA2G4AP47712 749 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 CYTH1Q15438 398 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 TTC39BQ5VTQ0 682 aaPredicted RBP10.06□□□□□ -0.8
SNX13-203ENST00000428135 ZNF571Q7Z3V5 609 aaPredicted RBP10.06□□□□□ -0.8
SNX13-203ENST00000428135 PPIL6Q8IXY8 311 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 KCNB2Q92953 911 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 ADNPQ9H2P0 1102 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 PIF1Q9H611 641 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 PDGFCQ9NRA1 345 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.06□□□□□ -0.8
SNX13-203ENST00000428135 NKRFO15226 690 aaKnown RBP eCLIP10.06□□□□□ -0.8
SNX13-203ENST00000428135 PGM1P36871 562 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 SNRPFP62306 86 aaKnown RBP10.06□□□□□ -0.8
SNX13-203ENST00000428135 UGP2Q16851 508 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 KCNK18Q7Z418 384 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 LGI2Q8N0V4 545 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 USP38Q8NB14 1042 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 GLIS3Q8NEA6 775 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 MED8Q96G25 268 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 ACTR5Q9H9F9 607 aaPredicted RBP10.06□□□□□ -0.8
SNX13-203ENST00000428135 ACP6Q9NPH0 428 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 O00370 1275 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 BOLA3Q53S33 107 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 SLC13A5Q86YT5 568 aaPredicted RBP10.06□□□□□ -0.8
SNX13-203ENST00000428135 ENGASEQ8NFI3 743 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 HELQQ8TDG4 1101 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 TRPV2Q9Y5S1 764 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 GTPBP10A4D1E9 387 aaKnown RBP10.05□□□□□ -0.8
SNX13-203ENST00000428135 P4HA2O15460 535 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 NDUFB5O43674 189 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 TBX4P57082 545 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 BST2Q10589 180 aaKnown RBP10.05□□□□□ -0.8
SNX13-203ENST00000428135 SLC9A5Q14940 896 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 FNDC3BQ53EP0 1204 aaKnown RBP10.05□□□□□ -0.8
SNX13-203ENST00000428135 CATSPERGQ6ZRH7 1159 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 FBXO36Q8NEA4 188 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 FAM111AQ96PZ2 611 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 IDI2Q9BXS1 227 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 VTA1Q9NP79 307 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 ARHGAP26Q9UNA1 814 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 DTNAQ9Y4J8 743 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 CAPN6Q9Y6Q1 641 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 AKAP10O43572 662 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 ANXA9O76027 345 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 CYP2F1P24903 491 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 CTNNB1P35222 781 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 TUBP50607 506 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 PTK6Q13882 451 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 IKBKEQ14164 716 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 FLOT2Q14254 428 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 ZNF284Q2VY69 593 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 SPATA21Q7Z572 469 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 C10orf53Q8N6V4 93 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 FAM162AQ96A26 154 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 NRBF2Q96F24 287 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 RBM22Q9NW64 420 aaKnown RBP eCLIP10.05□□□□□ -0.8
SNX13-203ENST00000428135 STX18Q9P2W9 335 aaKnown RBP10.05□□□□□ -0.8
SNX13-203ENST00000428135 DSEQ9UL01 958 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 VANGL2Q9ULK5 521 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 IPPQ9Y573 584 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 TMEM120BA0PK00 339 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 ERI2A8K979 691 aaKnown RBP10.05□□□□□ -0.8
SNX13-203ENST00000428135 SNRPAP09012 282 aaKnown RBP10.05□□□□□ -0.8
SNX13-203ENST00000428135 SMIM10L2AP0DMW4 78 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 SMIM10L2BP0DMW5 78 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 PYGBP11216 843 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 YBX3P16989 372 aaKnown RBP eCLIP10.05□□□□□ -0.8
SNX13-203ENST00000428135 AMPD1P23109 780 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 SLC26A2P50443 739 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 TMED1Q13445 227 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 TTI2Q6NXR4 508 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 SYDE1Q6ZW31 735 aaPredicted RBP10.05□□□□□ -0.8
SNX13-203ENST00000428135 HERC6Q8IVU3 1022 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 CALML6Q8TD86 181 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 KRT35Q92764 455 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 ZMYND8Q9ULU4 1186 aaPredicted RBP10.05□□□□□ -0.8
SNX13-203ENST00000428135 CDYLQ9Y232 598 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 RGPD8O14715 1765 aaPredicted RBP10.05□□□□□ -0.8
SNX13-203ENST00000428135 F8VZ95 297 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 MUTP22033 750 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 RHBDL3P58872 404 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 DLG4P78352 724 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 SEMA3FQ13275 785 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 TFDP3Q5H9I0 405 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 NETO2Q8NC67 525 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 EPS8L3Q8TE67 593 aaKnown RBP10.05□□□□□ -0.8
SNX13-203ENST00000428135 ZSWIM1Q9BR11 485 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 CORO1BQ9BR76 489 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms