RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 C12orf29Q8N999 325 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 IRGQQ8WZA9 623 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 FAM3CQ92520 227 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 FBXO32Q969P5 355 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 RSPRY1Q96DX4 576 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 FAM122AQ96E09 287 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 CNOT6LQ96LI5 555 aaKnown RBP9.64□□□□□ -0.87
SMC1A-203ENST00000428014 LRRC3BQ96PB8 259 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 KCNK16Q96T55 309 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 MED10Q9BTT4 135 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 SMOC2Q9H3U7 446 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 CNGB3Q9NQW8 809 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 PRMT8Q9NR22 394 aaPredicted RBP9.64□□□□□ -0.87
SMC1A-203ENST00000428014 HEBP1Q9NRV9 189 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 OLA1Q9NTK5 396 aaKnown RBP9.64□□□□□ -0.87
SMC1A-203ENST00000428014 HESX1Q9UBX0 185 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 APEX2Q9UBZ4 518 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 HMGXB4Q9UGU5 601 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 ZNF510Q9Y2H8 683 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 FAM186AA6NE01 2351 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 MYH10P35580 1976 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 FAM170BA6NMN3 283 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 CHURC1-FNTBB4DL54 471 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 SPECC1L-ADORA2AF8WAN1 911 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 ATG13O75143 517 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 FBXO21O94952 628 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 LATS1O95835 1130 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 PDGFBP01127 241 aaPredicted RBP9.63□□□□□ -0.87
SMC1A-203ENST00000428014 CHRNB1P11230 501 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 ATP5C1P36542 298 aaKnown RBP9.63□□□□□ -0.87
SMC1A-203ENST00000428014 MFAP3P55082 362 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 COG7P83436 770 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 NHLH1Q02575 133 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 MTA1Q13330 715 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 NNTQ13423 1086 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 EXOC3L4Q17RC7 722 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 CCDC142Q17RM4 750 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 EML3Q32P44 896 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 DPCR1Q3MIW9 517 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 TMEM196Q5HYL7 178 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 HTR3DQ70Z44 454 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 SPEM1Q8N4L4 309 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 PRSS33Q8NF86 280 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 FLCNQ8NFG4 579 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 TATDN2Q93075 761 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 ZDHHC16Q969W1 377 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 EEF2KMTQ96G04 330 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 HEXIM2Q96MH2 286 aaKnown RBP9.63□□□□□ -0.87
SMC1A-203ENST00000428014 BPIFA3Q9BQP9 254 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 ECT2Q9H8V3 914 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 PLCB1Q9NQ66 1216 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 GKN1Q9NS71 199 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 ANO10Q9NW15 660 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 MARK1Q9P0L2 795 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 CA14Q9ULX7 337 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.63□□□□□ -0.87
SMC1A-203ENST00000428014 PCDHGA2Q9Y5H1 932 aa9.63□□□□□ -0.87
SMC1A-203ENST00000428014 C2orf78A6NCI8 922 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.62□□□□□ -0.87
SMC1A-203ENST00000428014 LEFTY2O00292 366 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 CLDN5O00501 218 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 HOXC11O43248 304 aaPredicted RBP9.62□□□□□ -0.87
SMC1A-203ENST00000428014 MED7O43513 233 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 TLR5O60602 858 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 BEST1O76090 585 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 LETM1O95202 739 aaPredicted RBP9.62□□□□□ -0.87
SMC1A-203ENST00000428014 RALAP11233 206 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 CCDC130P13994 396 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 TARSP26639 723 aaKnown RBP9.62□□□□□ -0.87
SMC1A-203ENST00000428014 CNR2P34972 360 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 ACADSBP45954 432 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 IFNAR2P48551 515 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 CCR3P51677 355 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 KPNA1P52294 538 aaPredicted RBP9.62□□□□□ -0.87
SMC1A-203ENST00000428014 MAP3K7CLP57077 242 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 SNX16P57768 344 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 BPIFB4P59827 614 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 GRM2Q14416 872 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 TPD52L1Q16890 204 aaPredicted RBP9.62□□□□□ -0.87
SMC1A-203ENST00000428014 CCDC183Q5T5S1 534 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 SDHAF4Q5VUM1 108 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 CDKAL1Q5VV42 579 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 NUDT18Q6ZVK8 323 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 PIGZQ86VD9 579 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 FMNL3Q8IVF7 1028 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 ADGRG2Q8IZP9 1017 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 PPM1KQ8N3J5 372 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 ARL14EPQ8N8R7 260 aaPredicted RBP9.62□□□□□ -0.87
SMC1A-203ENST00000428014 ZBTB44Q8NCP5 570 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 GPT2Q8TD30 523 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 SH3RF2Q8TEC5 729 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 SLC35F5Q8WV83 523 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 SHC3Q92529 594 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 ZFRQ96KR1 1074 aaKnown RBP9.62□□□□□ -0.87
SMC1A-203ENST00000428014 ARID3AQ99856 593 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 TUBGCP2Q9BSJ2 902 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 DCLK3Q9C098 648 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 RNF38Q9H0F5 515 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 LHX5Q9H2C1 402 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 NDST4Q9H3R1 872 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms