RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 PDK2Q15119 407 aa22.71■■□□□ 1.23
CNEP1R1-202ENST00000427478 TIGD5Q53EQ6 642 aa22.71■■□□□ 1.23
CNEP1R1-202ENST00000427478 ARCQ7LC44 396 aa22.71■■□□□ 1.23
CNEP1R1-202ENST00000427478 SPATA18Q8TC71 538 aa22.71■■□□□ 1.23
CNEP1R1-202ENST00000427478 EPS8L3Q8TE67 593 aaKnown RBP22.71■■□□□ 1.23
CNEP1R1-202ENST00000427478 RSAD2Q8WXG1 361 aa22.71■■□□□ 1.23
CNEP1R1-202ENST00000427478 RNF157Q96PX1 679 aa22.71■■□□□ 1.23
CNEP1R1-202ENST00000427478 TBCBQ99426 244 aa22.71■■□□□ 1.23
CNEP1R1-202ENST00000427478 PCDH18Q9HCL0 1135 aa22.71■■□□□ 1.23
CNEP1R1-202ENST00000427478 TPX2Q9ULW0 747 aaKnown RBP22.71■■□□□ 1.23
CNEP1R1-202ENST00000427478 FAM200BP0CF97 657 aa22.7■■□□□ 1.23
CNEP1R1-202ENST00000427478 ACTN2P35609 894 aa22.7■■□□□ 1.23
CNEP1R1-202ENST00000427478 ADCY1Q08828 1119 aa22.7■■□□□ 1.23
CNEP1R1-202ENST00000427478 TFDP2Q14188 446 aa22.7■■□□□ 1.23
CNEP1R1-202ENST00000427478 EFHC1Q5JVL4 640 aa22.7■■□□□ 1.23
CNEP1R1-202ENST00000427478 ZCCHC9Q8N567 271 aaKnown RBP22.7■■□□□ 1.23
CNEP1R1-202ENST00000427478 FAM149B1Q96BN6 582 aa22.7■■□□□ 1.23
CNEP1R1-202ENST00000427478 PGBD4Q96DM1 585 aa22.7■■□□□ 1.23
CNEP1R1-202ENST00000427478 NCAPGQ9BPX3 1015 aa22.7■■□□□ 1.23
CNEP1R1-202ENST00000427478 TRPV6Q9H1D0 765 aa22.7■■□□□ 1.23
CNEP1R1-202ENST00000427478 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.7■■□□□ 1.23
CNEP1R1-202ENST00000427478 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.7■■□□□ 1.23
CNEP1R1-202ENST00000427478 MYBPHLA2RUH7 354 aa22.7■■□□□ 1.22
CNEP1R1-202ENST00000427478 MDM4O15151 490 aa22.7■■□□□ 1.22
CNEP1R1-202ENST00000427478 IL4RP24394 825 aa22.7■■□□□ 1.22
CNEP1R1-202ENST00000427478 RABGGTBP53611 331 aa22.7■■□□□ 1.22
CNEP1R1-202ENST00000427478 MAGOHP61326 146 aaKnown RBP22.7■■□□□ 1.22
CNEP1R1-202ENST00000427478 KYNUQ16719 465 aa22.7■■□□□ 1.22
CNEP1R1-202ENST00000427478 CENPIQ92674 756 aaPredicted RBP22.7■■□□□ 1.22
CNEP1R1-202ENST00000427478 LRRC4Q9HBW1 653 aa22.7■■□□□ 1.22
CNEP1R1-202ENST00000427478 MOXD2PA6NHM9 499 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 INHAP05111 366 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 RBP3P10745 1247 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 CKBP12277 381 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 SLCO1A2P46721 670 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 IRAK1P51617 712 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 GRIK3Q13003 919 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 PPP6R3Q5H9R7 873 aaPredicted RBP22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 EMC10Q5UCC4 262 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 C1orf228Q6PIY5 440 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 B4GALNT4Q76KP1 1039 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 UNC45BQ8IWX7 931 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 DEFB106AQ8N104 65 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 PXYLP1Q8TE99 480 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 HASPINQ8TF76 798 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 P3H4Q92791 437 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 PCED1BQ96HM7 432 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 NINJ2Q9NZG7 142 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 B3GAT3O94766 335 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 TTC4O95801 387 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 BRCC3P46736 316 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 NDUFV1P49821 464 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 PPARDQ03181 441 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 NOMO1Q15155 1222 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 ANKRD20A8PQ5CZ79 823 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 ERMARDQ5T6L9 678 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 RNASEH2BQ5TBB1 312 aaKnown RBP22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 FAM35AQ86V20 835 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 ZC3H18Q86VM9 953 aaKnown RBP22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 ECHDC2Q86YB7 292 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 SIX6OS1Q8N1H7 587 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 KCTD13Q8WZ19 329 aa22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 RBM15Q96T37 977 aaKnown RBP eCLIP22.69■■□□□ 1.22
CNEP1R1-202ENST00000427478 CEP350Q5VT06 3117 aa22.68■■□□□ 1.22
CNEP1R1-202ENST00000427478 ODC1P11926 461 aa22.68■■□□□ 1.22
CNEP1R1-202ENST00000427478 MATKP42679 507 aa22.68■■□□□ 1.22
CNEP1R1-202ENST00000427478 SULT1E1P49888 294 aa22.68■■□□□ 1.22
CNEP1R1-202ENST00000427478 MRPS5P82675 430 aaKnown RBP22.68■■□□□ 1.22
CNEP1R1-202ENST00000427478 GUCY1A3Q02108 690 aa22.68■■□□□ 1.22
CNEP1R1-202ENST00000427478 MORF4L2Q15014 288 aa22.68■■□□□ 1.22
CNEP1R1-202ENST00000427478 TLCD1Q96CP7 247 aa22.68■■□□□ 1.22
CNEP1R1-202ENST00000427478 C9orf72Q96LT7 481 aa22.68■■□□□ 1.22
CNEP1R1-202ENST00000427478 DHX35Q9H5Z1 703 aaKnown RBP22.68■■□□□ 1.22
CNEP1R1-202ENST00000427478 CALCOCO1Q9P1Z2 691 aa22.68■■□□□ 1.22
CNEP1R1-202ENST00000427478 CDH9Q9ULB4 789 aa22.68■■□□□ 1.22
CNEP1R1-202ENST00000427478 APOL1O14791 398 aa22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 DAB1O75553 588 aa22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 AP1G2O75843 785 aa22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 SKIP12755 728 aa22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 ROR1Q01973 937 aa22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 LRRC31Q6UY01 552 aa22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 ARFGAP2Q8N6H7 521 aa22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 CCDC185Q8N715 623 aa22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 PQLC3Q8N755 202 aa22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 FAM71DQ8N9W8 422 aa22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 PCDH19Q8TAB3 1148 aa22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 PGM2Q96G03 612 aa22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 PKNOX2Q96KN3 472 aa22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 TMEM109Q9BVC6 243 aa22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 FOXP3Q9BZS1 431 aa22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 UBN1Q9NPG3 1134 aa22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 AP4E1Q9UPM8 1137 aa22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 A0A1W2PQ45 241 aaPredicted RBP22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 A0A1W2PQY0 241 aa22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 RASGRF2O14827 1237 aa22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 RGS16O15492 202 aaPredicted RBP22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 CAPN15O75808 1086 aa22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 TKTL1P51854 596 aa22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 TUSC3Q13454 348 aa22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 DARS2Q6PI48 645 aaKnown RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms