RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 URI1O94763 535 aaPredicted RBP10.82□□□□□ -0.68
MDC1-205ENST00000425072 USP17L7P0C7H9 530 aa10.82□□□□□ -0.68
MDC1-205ENST00000425072 COMTP21964 271 aa10.82□□□□□ -0.68
MDC1-205ENST00000425072 PSMA2P25787 234 aa10.82□□□□□ -0.68
MDC1-205ENST00000425072 GBP1P32455 592 aa10.82□□□□□ -0.68
MDC1-205ENST00000425072 MATKP42679 507 aa10.82□□□□□ -0.68
MDC1-205ENST00000425072 CACNA2D1P54289 1103 aa10.82□□□□□ -0.68
MDC1-205ENST00000425072 SMAD3P84022 425 aaKnown RBP10.82□□□□□ -0.68
MDC1-205ENST00000425072 CLUL1Q15846 466 aa10.82□□□□□ -0.68
MDC1-205ENST00000425072 DDR2Q16832 855 aa10.82□□□□□ -0.68
MDC1-205ENST00000425072 CCDC142Q17RM4 750 aa10.82□□□□□ -0.68
MDC1-205ENST00000425072 BOLA3Q53S33 107 aa10.82□□□□□ -0.68
MDC1-205ENST00000425072 ODF2Q5BJF6 829 aa10.82□□□□□ -0.68
MDC1-205ENST00000425072 LRRC38Q5VT99 294 aa10.82□□□□□ -0.68
MDC1-205ENST00000425072 BTBD8Q5XKL5 378 aa10.82□□□□□ -0.68
MDC1-205ENST00000425072 CC2D1AQ6P1N0 951 aaPredicted RBP10.82□□□□□ -0.68
MDC1-205ENST00000425072 LILRA6Q6PI73 481 aa10.82□□□□□ -0.68
MDC1-205ENST00000425072 CHRDL2Q6WN34 429 aa10.82□□□□□ -0.68
MDC1-205ENST00000425072 NT5DC3Q86UY8 548 aa10.82□□□□□ -0.68
MDC1-205ENST00000425072 RHOT1Q8IXI2 618 aa10.82□□□□□ -0.68
MDC1-205ENST00000425072 HDAC7Q8WUI4 952 aa10.82□□□□□ -0.68
MDC1-205ENST00000425072 KHSRPQ92945 711 aaKnown RBP eCLIP10.82□□□□□ -0.68
MDC1-205ENST00000425072 FAM149B1Q96BN6 582 aa10.82□□□□□ -0.68
MDC1-205ENST00000425072 PBKQ96KB5 322 aa10.82□□□□□ -0.68
MDC1-205ENST00000425072 SLITRK1Q96PX8 696 aa10.82□□□□□ -0.68
MDC1-205ENST00000425072 PBX4Q9BYU1 374 aa10.82□□□□□ -0.68
MDC1-205ENST00000425072 PLEKHA4Q9H4M7 779 aa10.82□□□□□ -0.68
MDC1-205ENST00000425072 PRDM6Q9NQX0 595 aa10.82□□□□□ -0.68
MDC1-205ENST00000425072 METTL5Q9NRN9 209 aaKnown RBP10.82□□□□□ -0.68
MDC1-205ENST00000425072 CHORDC1Q9UHD1 332 aaPredicted RBP10.82□□□□□ -0.68
MDC1-205ENST00000425072 CAPN6Q9Y6Q1 641 aa10.82□□□□□ -0.68
MDC1-205ENST00000425072 KIAA1671Q9BY89 1806 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 FAM92AA1XBS5 289 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 C2orf71A6NGG8 1288 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 TMEM110-MUSTN1A8MSY1 372 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 CES2O00748 559 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 DPYSL4O14531 572 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 GRM6O15303 877 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 LTFP02788 710 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 KRT7P08729 469 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 RALAP11233 206 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 PCK1P35558 622 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 SSR1P43307 286 aaKnown RBP10.81□□□□□ -0.68
MDC1-205ENST00000425072 PTPN9P43378 593 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 SLC5A3P53794 718 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 PTPROQ16827 1216 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 SLC25A52Q3SY17 297 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 PABPC1LQ4VXU2 614 aaKnown RBP10.81□□□□□ -0.68
MDC1-205ENST00000425072 DCAF6Q58WW2 860 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 BSPRYQ5W0U4 402 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 PPP2R2DQ66LE6 453 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 FAM109BQ6ICB4 259 aaPredicted RBP10.81□□□□□ -0.68
MDC1-205ENST00000425072 TADA2BQ86TJ2 420 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 DEFB106AQ8N104 65 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 ELMOD1Q8N336 334 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 ZNF276Q8N554 614 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 PDZD8Q8NEN9 1154 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 JOSD2Q8TAC2 188 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 RNF139Q8WU17 664 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 AUTS2Q8WXX7 1259 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 OVCA2Q8WZ82 227 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 PPP2R3CQ969Q6 453 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 HES6Q96HZ4 224 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 ZNF512Q96ME7 567 aaPredicted RBP10.81□□□□□ -0.68
MDC1-205ENST00000425072 CDK5RAP1Q96SZ6 601 aaKnown RBP10.81□□□□□ -0.68
MDC1-205ENST00000425072 RHOBTB2Q9BYZ6 727 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 TLR8Q9NR97 1041 aaKnown RBP10.81□□□□□ -0.68
MDC1-205ENST00000425072 TMEM30AQ9NV96 361 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 DDX56Q9NY93 547 aaKnown RBP10.81□□□□□ -0.68
MDC1-205ENST00000425072 UXTQ9UBK9 157 aaPredicted RBP10.81□□□□□ -0.68
MDC1-205ENST00000425072 TJP2Q9UDY2 1190 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 MTUS1Q9ULD2 1270 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 YBX2Q9Y2T7 364 aaKnown RBP10.81□□□□□ -0.68
MDC1-205ENST00000425072 HYOU1Q9Y4L1 999 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 PCDHA3Q9Y5H8 950 aa10.81□□□□□ -0.68
MDC1-205ENST00000425072 MTCL1Q9Y4B5 1905 aaKnown RBP10.8□□□□□ -0.68
MDC1-205ENST00000425072 SLC38A8A6NNN8 435 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 YJEFN3A6XGL0 299 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 E7ENQ6 273 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 ENC1O14682 589 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 FSCN2O14926 492 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 TGM5O43548 720 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 DAB1O75553 588 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 GRAP2O75791 330 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 ENDOD1O94919 500 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 SEC24AO95486 1093 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 FTCDO95954 541 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 GLUD1P00367 558 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 LRG1P02750 347 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 NCAM1P13591 858 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 CTNNA2P26232 953 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 PAFAH1B1P43034 410 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 CDR1P51861 262 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 RWDD2BP57060 319 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 YWHAGP61981 247 aaKnown RBP eCLIP10.8□□□□□ -0.68
MDC1-205ENST00000425072 TUBB4BP68371 445 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 TAF5Q15542 800 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 CCDC14Q49A88 953 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 PLPP4Q5VZY2 271 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 LLGL2Q6P1M3 1020 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms