RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 FAM237BA0A1B0GVD1 139 aa15.83■□□□□ 0.12
C9orf3-204ENST00000424143 MSCO60682 206 aa15.83■□□□□ 0.12
C9orf3-204ENST00000424143 BPGMP07738 259 aa15.83■□□□□ 0.12
C9orf3-204ENST00000424143 KCNA3P22001 575 aa15.83■□□□□ 0.12
C9orf3-204ENST00000424143 ZNF143P52747 638 aaPredicted RBP15.83■□□□□ 0.12
C9orf3-204ENST00000424143 YWHAGP61981 247 aaKnown RBP eCLIP15.83■□□□□ 0.12
C9orf3-204ENST00000424143 YWHAZP63104 245 aaKnown RBP15.83■□□□□ 0.12
C9orf3-204ENST00000424143 BASP1P80723 227 aaKnown RBP15.83■□□□□ 0.12
C9orf3-204ENST00000424143 THEMIS2Q5TEJ8 643 aa15.83■□□□□ 0.12
C9orf3-204ENST00000424143 DARS2Q6PI48 645 aaKnown RBP15.83■□□□□ 0.12
C9orf3-204ENST00000424143 TREML1Q86YW5 311 aa15.83■□□□□ 0.12
C9orf3-204ENST00000424143 MAP7D3Q8IWC1 876 aa15.83■□□□□ 0.12
C9orf3-204ENST00000424143 RBM15BQ8NDT2 890 aaKnown RBP15.83■□□□□ 0.12
C9orf3-204ENST00000424143 PIP4K2CQ8TBX8 421 aa15.83■□□□□ 0.12
C9orf3-204ENST00000424143 UCMAQ8WVF2 138 aa15.83■□□□□ 0.12
C9orf3-204ENST00000424143 TMEM143Q96AN5 459 aa15.83■□□□□ 0.12
C9orf3-204ENST00000424143 KLF6Q99612 283 aaPredicted RBP15.83■□□□□ 0.12
C9orf3-204ENST00000424143 CNPY3Q9BT09 278 aa15.83■□□□□ 0.12
C9orf3-204ENST00000424143 GCOM2Q9BZD3 368 aaPredicted RBP15.83■□□□□ 0.12
C9orf3-204ENST00000424143 RPAP3Q9H6T3 665 aaPredicted RBP15.83■□□□□ 0.12
C9orf3-204ENST00000424143 ZWILCHQ9H900 591 aa15.83■□□□□ 0.12
C9orf3-204ENST00000424143 CYP3A43Q9HB55 503 aa15.83■□□□□ 0.12
C9orf3-204ENST00000424143 USP18Q9UMW8 372 aa15.83■□□□□ 0.12
C9orf3-204ENST00000424143 LOC285556D6RIA3 1793 aa15.82■□□□□ 0.12
C9orf3-204ENST00000424143 SDR42E2A6NKP2 422 aa15.82■□□□□ 0.12
C9orf3-204ENST00000424143 FAM159BA6NKW6 160 aa15.82■□□□□ 0.12
C9orf3-204ENST00000424143 CCNT2O60583 730 aaKnown RBP15.82■□□□□ 0.12
C9orf3-204ENST00000424143 MAFO75444 373 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-204ENST00000424143 APOEP02649 317 aa15.82■□□□□ 0.12
C9orf3-204ENST00000424143 TPSB2P20231 275 aa15.82■□□□□ 0.12
C9orf3-204ENST00000424143 SSTR3P32745 418 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-204ENST00000424143 RAB27AP51159 221 aa15.82■□□□□ 0.12
C9orf3-204ENST00000424143 DYNLT1P63172 113 aa15.82■□□□□ 0.12
C9orf3-204ENST00000424143 DSG1Q02413 1049 aa15.82■□□□□ 0.12
C9orf3-204ENST00000424143 NAB1Q13506 487 aa15.82■□□□□ 0.12
C9orf3-204ENST00000424143 TPSAB1Q15661 275 aa15.82■□□□□ 0.12
C9orf3-204ENST00000424143 ZNF699Q32M78 642 aa15.82■□□□□ 0.12
C9orf3-204ENST00000424143 CYP4A22Q5TCH4 519 aa15.82■□□□□ 0.12
C9orf3-204ENST00000424143 IER5Q5VY09 327 aa15.82■□□□□ 0.12
C9orf3-204ENST00000424143 EP400NLQ6ZTU2 488 aa15.82■□□□□ 0.12
C9orf3-204ENST00000424143 NUDCD3Q8IVD9 361 aa15.82■□□□□ 0.12
C9orf3-204ENST00000424143 ULK2Q8IYT8 1036 aa15.82■□□□□ 0.12
C9orf3-204ENST00000424143 TTC39CQ8N584 583 aa15.82■□□□□ 0.12
C9orf3-204ENST00000424143 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.82■□□□□ 0.12
C9orf3-204ENST00000424143 AFG1LQ8WV93 481 aa15.82■□□□□ 0.12
C9orf3-204ENST00000424143 JADE3Q92613 823 aa15.82■□□□□ 0.12
C9orf3-204ENST00000424143 ACSF2Q96CM8 615 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-204ENST00000424143 FAF2Q96CS3 445 aa15.82■□□□□ 0.12
C9orf3-204ENST00000424143 PRR11Q96HE9 360 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-204ENST00000424143 FAM161BQ96MY7 647 aa15.82■□□□□ 0.12
C9orf3-204ENST00000424143 RNF157Q96PX1 679 aa15.82■□□□□ 0.12
C9orf3-204ENST00000424143 TBCBQ99426 244 aa15.82■□□□□ 0.12
C9orf3-204ENST00000424143 ACO2Q99798 780 aaKnown RBP15.82■□□□□ 0.12
C9orf3-204ENST00000424143 ECSITQ9BQ95 431 aa15.82■□□□□ 0.12
C9orf3-204ENST00000424143 KLC2Q9H0B6 622 aa15.82■□□□□ 0.12
C9orf3-204ENST00000424143 VRTNQ9H8Y1 702 aa15.82■□□□□ 0.12
C9orf3-204ENST00000424143 NDE1Q9NXR1 346 aa15.82■□□□□ 0.12
C9orf3-204ENST00000424143 SAE1Q9UBE0 346 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-204ENST00000424143 HBS1LQ9Y450 684 aaKnown RBP15.82■□□□□ 0.12
C9orf3-204ENST00000424143 DPYSL4O14531 572 aa15.81■□□□□ 0.12
C9orf3-204ENST00000424143 RTN3O95197 1032 aaPredicted RBP15.81■□□□□ 0.12
C9orf3-204ENST00000424143 IL18RAPO95256 599 aa15.81■□□□□ 0.12
C9orf3-204ENST00000424143 TNNC2P02585 160 aa15.81■□□□□ 0.12
C9orf3-204ENST00000424143 HMGCRP04035 888 aa15.81■□□□□ 0.12
C9orf3-204ENST00000424143 HOXC6P09630 235 aa15.81■□□□□ 0.12
C9orf3-204ENST00000424143 OSBPP22059 807 aa15.81■□□□□ 0.12
C9orf3-204ENST00000424143 PROZP22891 400 aa15.81■□□□□ 0.12
C9orf3-204ENST00000424143 IRX4P78413 519 aa15.81■□□□□ 0.12
C9orf3-204ENST00000424143 MRPS5P82675 430 aaKnown RBP15.81■□□□□ 0.12
C9orf3-204ENST00000424143 TMPRSS15P98073 1019 aa15.81■□□□□ 0.12
C9orf3-204ENST00000424143 BTKQ06187 659 aa15.81■□□□□ 0.12
C9orf3-204ENST00000424143 CAPSQ13938 189 aa15.81■□□□□ 0.12
C9orf3-204ENST00000424143 BOLA3Q53S33 107 aa15.81■□□□□ 0.12
C9orf3-204ENST00000424143 RIPOR1Q6ZS17 1223 aa15.81■□□□□ 0.12
C9orf3-204ENST00000424143 TRMT1LQ7Z2T5 733 aaKnown RBP15.81■□□□□ 0.12
C9orf3-204ENST00000424143 KRT27Q7Z3Y8 459 aa15.81■□□□□ 0.12
C9orf3-204ENST00000424143 TTC7BQ86TV6 843 aa15.81■□□□□ 0.12
C9orf3-204ENST00000424143 ZC3H18Q86VM9 953 aaKnown RBP15.81■□□□□ 0.12
C9orf3-204ENST00000424143 DNERQ8NFT8 737 aa15.81■□□□□ 0.12
C9orf3-204ENST00000424143 DTNBP1Q96EV8 351 aa15.81■□□□□ 0.12
C9orf3-204ENST00000424143 FGD4Q96M96 766 aa15.81■□□□□ 0.12
C9orf3-204ENST00000424143 NLRP4Q96MN2 994 aa15.81■□□□□ 0.12
C9orf3-204ENST00000424143 GBP5Q96PP8 586 aa15.81■□□□□ 0.12
C9orf3-204ENST00000424143 C2orf40Q9H1Z8 148 aa15.81■□□□□ 0.12
C9orf3-204ENST00000424143 PPARGC1AQ9UBK2 798 aaKnown RBP15.81■□□□□ 0.12
C9orf3-204ENST00000424143 ZC3H7BQ9UGR2 993 aaKnown RBP15.81■□□□□ 0.12
C9orf3-204ENST00000424143 KIAA1257Q9ULG3 409 aa15.81■□□□□ 0.12
C9orf3-204ENST00000424143 E5RJQ4 531 aa15.8■□□□□ 0.12
C9orf3-204ENST00000424143 PDLIM1O00151 329 aa15.8■□□□□ 0.12
C9orf3-204ENST00000424143 MYCNP04198 464 aaPredicted RBP15.8■□□□□ 0.12
C9orf3-204ENST00000424143 EDN1P05305 212 aa15.8■□□□□ 0.12
C9orf3-204ENST00000424143 LYNP07948 512 aa15.8■□□□□ 0.12
C9orf3-204ENST00000424143 AMPD1P23109 780 aa15.8■□□□□ 0.12
C9orf3-204ENST00000424143 PRDX6P30041 224 aa15.8■□□□□ 0.12
C9orf3-204ENST00000424143 CPOXP36551 454 aa15.8■□□□□ 0.12
C9orf3-204ENST00000424143 SESN3P58005 492 aa15.8■□□□□ 0.12
C9orf3-204ENST00000424143 TNFAIP1Q13829 316 aa15.8■□□□□ 0.12
C9orf3-204ENST00000424143 CDHR3Q6ZTQ4 885 aa15.8■□□□□ 0.12
C9orf3-204ENST00000424143 ACAD11Q709F0 780 aa15.8■□□□□ 0.12
C9orf3-204ENST00000424143 NCAPG2Q86XI2 1143 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms