RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 NMUR1Q9HB89 426 aa27.81■■■□□ 2.04
CDK9-202ENST00000421939 SAMSN1Q9NSI8 373 aaKnown RBP27.81■■■□□ 2.04
CDK9-202ENST00000421939 ANO10Q9NW15 660 aa27.81■■■□□ 2.04
CDK9-202ENST00000421939 OSER1Q9NX31 292 aa27.81■■■□□ 2.04
CDK9-202ENST00000421939 APEX2Q9UBZ4 518 aa27.81■■■□□ 2.04
CDK9-202ENST00000421939 CNTN6Q9UQ52 1028 aa27.81■■■□□ 2.04
CDK9-202ENST00000421939 A0A1W2PQH9 124 aa27.8■■■□□ 2.04
CDK9-202ENST00000421939 TULP2O00295 520 aa27.8■■■□□ 2.04
CDK9-202ENST00000421939 SETSIPP0DME0 302 aa27.8■■■□□ 2.04
CDK9-202ENST00000421939 KRT5P13647 590 aa27.8■■■□□ 2.04
CDK9-202ENST00000421939 BRD2P25440 801 aaKnown RBP27.8■■■□□ 2.04
CDK9-202ENST00000421939 STX1AQ16623 288 aa27.8■■■□□ 2.04
CDK9-202ENST00000421939 VWA3BQ502W6 1294 aa27.8■■■□□ 2.04
CDK9-202ENST00000421939 RAB41Q5JT25 222 aa27.8■■■□□ 2.04
CDK9-202ENST00000421939 FAM81BQ96LP2 452 aa27.8■■■□□ 2.04
CDK9-202ENST00000421939 NDST4Q9H3R1 872 aa27.8■■■□□ 2.04
CDK9-202ENST00000421939 ECT2Q9H8V3 914 aa27.8■■■□□ 2.04
CDK9-202ENST00000421939 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.8■■■□□ 2.04
CDK9-202ENST00000421939 PON1P27169 355 aa27.79■■■□□ 2.04
CDK9-202ENST00000421939 PSEN1P49768 467 aa27.79■■■□□ 2.04
CDK9-202ENST00000421939 MFAP3P55082 362 aa27.79■■■□□ 2.04
CDK9-202ENST00000421939 STILQ15468 1287 aa27.79■■■□□ 2.04
CDK9-202ENST00000421939 PKDCCQ504Y2 493 aa27.79■■■□□ 2.04
CDK9-202ENST00000421939 MIIPQ5JXC2 388 aa27.79■■■□□ 2.04
CDK9-202ENST00000421939 GJB7Q6PEY0 223 aa27.79■■■□□ 2.04
CDK9-202ENST00000421939 SCD5Q86SK9 330 aa27.79■■■□□ 2.04
CDK9-202ENST00000421939 C1orf210Q8IVY1 113 aa27.79■■■□□ 2.04
CDK9-202ENST00000421939 UBA3Q8TBC4 463 aa27.79■■■□□ 2.04
CDK9-202ENST00000421939 ZSWIM1Q9BR11 485 aa27.79■■■□□ 2.04
CDK9-202ENST00000421939 SPATA6Q9NWH7 488 aaPredicted RBP27.79■■■□□ 2.04
CDK9-202ENST00000421939 NAGPAQ9UK23 515 aa27.79■■■□□ 2.04
CDK9-202ENST00000421939 SLC9A3R1O14745 358 aaPredicted RBP27.78■■■□□ 2.04
CDK9-202ENST00000421939 NFATC1O95644 943 aa27.78■■■□□ 2.04
CDK9-202ENST00000421939 CHRNB1P11230 501 aa27.78■■■□□ 2.04
CDK9-202ENST00000421939 EEF1GP26641 437 aaKnown RBP27.78■■■□□ 2.04
CDK9-202ENST00000421939 PLA2G4AP47712 749 aa27.78■■■□□ 2.04
CDK9-202ENST00000421939 AMPD2Q01433 879 aa27.78■■■□□ 2.04
CDK9-202ENST00000421939 APBA1Q02410 837 aa27.78■■■□□ 2.04
CDK9-202ENST00000421939 LRRC32Q14392 662 aa27.78■■■□□ 2.04
CDK9-202ENST00000421939 PON2Q15165 354 aa27.78■■■□□ 2.04
CDK9-202ENST00000421939 CNGA2Q16280 664 aa27.78■■■□□ 2.04
CDK9-202ENST00000421939 TCP11X2Q5H9J9 407 aa27.78■■■□□ 2.04
CDK9-202ENST00000421939 C11orf57Q6ZUT1 292 aaPredicted RBP27.78■■■□□ 2.04
CDK9-202ENST00000421939 ATOH1Q92858 354 aaPredicted RBP27.78■■■□□ 2.04
CDK9-202ENST00000421939 CHFRQ96EP1 664 aa27.78■■■□□ 2.04
CDK9-202ENST00000421939 LINC00597Q9H2U6 94 aa27.78■■■□□ 2.04
CDK9-202ENST00000421939 CHRDQ9H2X0 955 aa27.78■■■□□ 2.04
CDK9-202ENST00000421939 LMAN1LQ9HAT1 526 aa27.78■■■□□ 2.04
CDK9-202ENST00000421939 MTPAPQ9NVV4 582 aaKnown RBP eCLIP27.78■■■□□ 2.04
CDK9-202ENST00000421939 TMEM63CQ9P1W3 806 aa27.78■■■□□ 2.04
CDK9-202ENST00000421939 M0QYV0 167 aa27.77■■■□□ 2.04
CDK9-202ENST00000421939 SCAMP3O14828 347 aaKnown RBP27.77■■■□□ 2.04
CDK9-202ENST00000421939 CALCAP01258 141 aa27.77■■■□□ 2.04
CDK9-202ENST00000421939 RARGP13631 454 aa27.77■■■□□ 2.04
CDK9-202ENST00000421939 TKTL1P51854 596 aa27.77■■■□□ 2.04
CDK9-202ENST00000421939 KLHDC10Q6PID8 442 aa27.77■■■□□ 2.04
CDK9-202ENST00000421939 LRRC4Q9HBW1 653 aa27.77■■■□□ 2.04
CDK9-202ENST00000421939 FAM86C1Q9NVL1 165 aa27.77■■■□□ 2.04
CDK9-202ENST00000421939 CLIC5Q9NZA1 410 aa27.77■■■□□ 2.04
CDK9-202ENST00000421939 E2F8A0AVK6 867 aa27.76■■■□□ 2.03
CDK9-202ENST00000421939 PES1O00541 588 aaKnown RBP27.76■■■□□ 2.03
CDK9-202ENST00000421939 TBX18O95935 607 aa27.76■■■□□ 2.03
CDK9-202ENST00000421939 GJA4P35212 333 aa27.76■■■□□ 2.03
CDK9-202ENST00000421939 ATP5C1P36542 298 aaKnown RBP27.76■■■□□ 2.03
CDK9-202ENST00000421939 ADIGQ0VDE8 80 aa27.76■■■□□ 2.03
CDK9-202ENST00000421939 NR1H3Q13133 447 aa27.76■■■□□ 2.03
CDK9-202ENST00000421939 TADA2BQ86TJ2 420 aa27.76■■■□□ 2.03
CDK9-202ENST00000421939 ARHGAP18Q8N392 663 aa27.76■■■□□ 2.03
CDK9-202ENST00000421939 IER2Q9BTL4 223 aa27.76■■■□□ 2.03
CDK9-202ENST00000421939 ULBP1Q9BZM6 244 aa27.76■■■□□ 2.03
CDK9-202ENST00000421939 SIX2Q9NPC8 291 aa27.76■■■□□ 2.03
CDK9-202ENST00000421939 SH3BP1Q9Y3L3 701 aa27.76■■■□□ 2.03
CDK9-202ENST00000421939 ZBED1O96006 694 aa27.75■■■□□ 2.03
CDK9-202ENST00000421939 RALAP11233 206 aa27.75■■■□□ 2.03
CDK9-202ENST00000421939 ARHGAP44Q17R89 818 aa27.75■■■□□ 2.03
CDK9-202ENST00000421939 C10orf120Q5SQS8 335 aa27.75■■■□□ 2.03
CDK9-202ENST00000421939 CDKAL1Q5VV42 579 aa27.75■■■□□ 2.03
CDK9-202ENST00000421939 PM20D1Q6GTS8 502 aa27.75■■■□□ 2.03
CDK9-202ENST00000421939 KCTD13Q8WZ19 329 aa27.75■■■□□ 2.03
CDK9-202ENST00000421939 SECISBP2LQ93073 1101 aaKnown RBP27.75■■■□□ 2.03
CDK9-202ENST00000421939 CDK5RAP1Q96SZ6 601 aaKnown RBP27.75■■■□□ 2.03
CDK9-202ENST00000421939 RBM12Q9NTZ6 932 aaKnown RBP27.75■■■□□ 2.03
CDK9-202ENST00000421939 TAB2Q9NYJ8 693 aa27.75■■■□□ 2.03
CDK9-202ENST00000421939 TBC1D14Q9P2M4 693 aa27.75■■■□□ 2.03
CDK9-202ENST00000421939 DNMT3LQ9UJW3 386 aa27.75■■■□□ 2.03
CDK9-202ENST00000421939 CACNA1IQ9P0X4 2223 aa27.75■■■□□ 2.03
CDK9-202ENST00000421939 LAMTOR5O43504 91 aa27.74■■■□□ 2.03
CDK9-202ENST00000421939 IRF1P10914 325 aa27.74■■■□□ 2.03
CDK9-202ENST00000421939 GOLGA8FQ08AF8 430 aa27.74■■■□□ 2.03
CDK9-202ENST00000421939 GOLGA8DPQ0D2H9 430 aa27.74■■■□□ 2.03
CDK9-202ENST00000421939 MTAPQ13126 283 aa27.74■■■□□ 2.03
CDK9-202ENST00000421939 CCINQ13939 588 aa27.74■■■□□ 2.03
CDK9-202ENST00000421939 DGKKQ5KSL6 1271 aa27.74■■■□□ 2.03
CDK9-202ENST00000421939 SIX6OS1Q8N1H7 587 aa27.74■■■□□ 2.03
CDK9-202ENST00000421939 ZNF276Q8N554 614 aa27.74■■■□□ 2.03
CDK9-202ENST00000421939 SLC35F5Q8WV83 523 aa27.74■■■□□ 2.03
CDK9-202ENST00000421939 SHC3Q92529 594 aa27.74■■■□□ 2.03
CDK9-202ENST00000421939 KLF16Q9BXK1 252 aaPredicted RBP27.74■■■□□ 2.03
CDK9-202ENST00000421939 NUDT5Q9UKK9 219 aa27.74■■■□□ 2.03
CDK9-202ENST00000421939 TRDMT1O14717 391 aaKnown RBP27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms