RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 EMC1Q8N766 993 aa22.11■■□□□ 1.13
USP48-205ENST00000421625 PDLIM7Q9NR12 457 aa22.11■■□□□ 1.13
USP48-205ENST00000421625 SOX13Q9UN79 622 aa22.11■■□□□ 1.13
USP48-205ENST00000421625 COMMD3-BMI1R4GMX3 469 aa22.11■■□□□ 1.13
USP48-205ENST00000421625 A0A0B4J269 797 aa22.11■■□□□ 1.13
USP48-205ENST00000421625 MAP3K10Q02779 954 aa22.11■■□□□ 1.13
USP48-205ENST00000421625 ASPHQ12797 758 aa22.11■■□□□ 1.13
USP48-205ENST00000421625 KCNJ11Q14654 390 aa22.11■■□□□ 1.13
USP48-205ENST00000421625 EFHC1Q5JVL4 640 aa22.11■■□□□ 1.13
USP48-205ENST00000421625 TRIM42Q8IWZ5 723 aa22.11■■□□□ 1.13
USP48-205ENST00000421625 SPATA18Q8TC71 538 aa22.11■■□□□ 1.13
USP48-205ENST00000421625 DTNBP1Q96EV8 351 aa22.11■■□□□ 1.13
USP48-205ENST00000421625 OLFM3Q96PB7 478 aa22.11■■□□□ 1.13
USP48-205ENST00000421625 CGRRF1Q99675 332 aa22.11■■□□□ 1.13
USP48-205ENST00000421625 SMYD2Q9NRG4 433 aa22.11■■□□□ 1.13
USP48-205ENST00000421625 MCF2LO15068 1137 aa22.1■■□□□ 1.13
USP48-205ENST00000421625 LSM8O95777 96 aaKnown RBP22.1■■□□□ 1.13
USP48-205ENST00000421625 SERPINA6P08185 405 aa22.1■■□□□ 1.13
USP48-205ENST00000421625 DLG1Q12959 904 aa22.1■■□□□ 1.13
USP48-205ENST00000421625 STYK1Q6J9G0 422 aa22.1■■□□□ 1.13
USP48-205ENST00000421625 NAT14Q8WUY8 206 aa22.1■■□□□ 1.13
USP48-205ENST00000421625 HSPH1Q92598 858 aa22.1■■□□□ 1.13
USP48-205ENST00000421625 FRMD8P1Q9BZ68 369 aaPredicted RBP22.1■■□□□ 1.13
USP48-205ENST00000421625 C1orf21Q9H246 121 aa22.1■■□□□ 1.13
USP48-205ENST00000421625 ZBTB12Q9Y330 459 aaPredicted RBP22.1■■□□□ 1.13
USP48-205ENST00000421625 SH3BP1Q9Y3L3 701 aa22.1■■□□□ 1.13
USP48-205ENST00000421625 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.1■■□□□ 1.13
USP48-205ENST00000421625 KRT37O76014 449 aa22.1■■□□□ 1.13
USP48-205ENST00000421625 PDE5AO76074 875 aa22.1■■□□□ 1.13
USP48-205ENST00000421625 OR6B1O95007 311 aa22.1■■□□□ 1.13
USP48-205ENST00000421625 KRT7P08729 469 aa22.1■■□□□ 1.13
USP48-205ENST00000421625 PEX2P28328 305 aa22.1■■□□□ 1.13
USP48-205ENST00000421625 CCNFP41002 786 aa22.1■■□□□ 1.13
USP48-205ENST00000421625 FKBP1AP62942 108 aaKnown RBP22.1■■□□□ 1.13
USP48-205ENST00000421625 TAP1Q03518 808 aa22.1■■□□□ 1.13
USP48-205ENST00000421625 MED21Q13503 144 aa22.1■■□□□ 1.13
USP48-205ENST00000421625 TAZQ16635 292 aa22.1■■□□□ 1.13
USP48-205ENST00000421625 ANGEL2Q5VTE6 544 aaKnown RBP22.1■■□□□ 1.13
USP48-205ENST00000421625 SWSAP1Q6NVH7 229 aa22.1■■□□□ 1.13
USP48-205ENST00000421625 SATL1Q86VE3 508 aa22.1■■□□□ 1.13
USP48-205ENST00000421625 MCF2L2Q86YR7 1114 aa22.1■■□□□ 1.13
USP48-205ENST00000421625 KCTD6Q8NC69 237 aa22.1■■□□□ 1.13
USP48-205ENST00000421625 SLC26A7Q8TE54 656 aa22.1■■□□□ 1.13
USP48-205ENST00000421625 PLAC1Q9HBJ0 212 aa22.1■■□□□ 1.13
USP48-205ENST00000421625 ZDHHC7Q9NXF8 308 aa22.1■■□□□ 1.13
USP48-205ENST00000421625 WDR81Q562E7 1941 aa22.09■■□□□ 1.13
USP48-205ENST00000421625 CNTNAP2Q9UHC6 1331 aa22.09■■□□□ 1.13
USP48-205ENST00000421625 SDR42E2A6NKP2 422 aa22.09■■□□□ 1.13
USP48-205ENST00000421625 APOC4-APOC2K7ER74 178 aa22.09■■□□□ 1.13
USP48-205ENST00000421625 SNNO75324 88 aaPredicted RBP22.09■■□□□ 1.13
USP48-205ENST00000421625 APOC2P02655 101 aa22.09■■□□□ 1.13
USP48-205ENST00000421625 EPHB1P54762 984 aa22.09■■□□□ 1.13
USP48-205ENST00000421625 YWHAZP63104 245 aaKnown RBP22.09■■□□□ 1.13
USP48-205ENST00000421625 IRX4P78413 519 aa22.09■■□□□ 1.13
USP48-205ENST00000421625 MCPH1Q8NEM0 835 aa22.09■■□□□ 1.13
USP48-205ENST00000421625 FAF2Q96CS3 445 aa22.09■■□□□ 1.13
USP48-205ENST00000421625 RMDN3Q96TC7 470 aa22.09■■□□□ 1.13
USP48-205ENST00000421625 TRIM56Q9BRZ2 755 aaKnown RBP22.09■■□□□ 1.13
USP48-205ENST00000421625 MSTO1Q9BUK6 570 aa22.09■■□□□ 1.13
USP48-205ENST00000421625 CALN1Q9BXU9 219 aa22.09■■□□□ 1.13
USP48-205ENST00000421625 CREB3O43889 395 aa22.09■■□□□ 1.13
USP48-205ENST00000421625 DGAT1O75907 488 aa22.09■■□□□ 1.13
USP48-205ENST00000421625 PABPC4LP0CB38 370 aaKnown RBP22.09■■□□□ 1.13
USP48-205ENST00000421625 MMRN1Q13201 1228 aa22.09■■□□□ 1.13
USP48-205ENST00000421625 PTPN20Q4JDL3 420 aa22.09■■□□□ 1.13
USP48-205ENST00000421625 PABPC1LQ4VXU2 614 aaKnown RBP22.09■■□□□ 1.13
USP48-205ENST00000421625 FAXCQ5TGI0 409 aa22.09■■□□□ 1.13
USP48-205ENST00000421625 DARS2Q6PI48 645 aaKnown RBP22.09■■□□□ 1.13
USP48-205ENST00000421625 ADGRG6Q86SQ4 1221 aa22.09■■□□□ 1.13
USP48-205ENST00000421625 THNSL1Q8IYQ7 743 aa22.09■■□□□ 1.13
USP48-205ENST00000421625 MMP19Q99542 508 aa22.09■■□□□ 1.13
USP48-205ENST00000421625 PDCD2LQ9BRP1 358 aa22.09■■□□□ 1.13
USP48-205ENST00000421625 TARS2Q9BW92 718 aaKnown RBP22.09■■□□□ 1.13
USP48-205ENST00000421625 ARID2Q68CP9 1835 aa22.09■■□□□ 1.13
USP48-205ENST00000421625 TNS1Q9HBL0 1735 aaKnown RBP22.09■■□□□ 1.13
USP48-205ENST00000421625 EDN1P05305 212 aa22.08■■□□□ 1.13
USP48-205ENST00000421625 KRT3P12035 628 aa22.08■■□□□ 1.13
USP48-205ENST00000421625 UQCRBP14927 111 aa22.08■■□□□ 1.13
USP48-205ENST00000421625 CCNIQ14094 377 aa22.08■■□□□ 1.13
USP48-205ENST00000421625 DENND1BQ6P3S1 775 aa22.08■■□□□ 1.13
USP48-205ENST00000421625 AAGABQ6PD74 315 aa22.08■■□□□ 1.13
USP48-205ENST00000421625 HIPK4Q8NE63 616 aa22.08■■□□□ 1.13
USP48-205ENST00000421625 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.08■■□□□ 1.13
USP48-205ENST00000421625 TMEM143Q96AN5 459 aa22.08■■□□□ 1.13
USP48-205ENST00000421625 CCDC124Q96CT7 223 aaKnown RBP22.08■■□□□ 1.13
USP48-205ENST00000421625 APOL6Q9BWW8 343 aa22.08■■□□□ 1.13
USP48-205ENST00000421625 SHCBP1LQ9BZQ2 653 aa22.08■■□□□ 1.13
USP48-205ENST00000421625 CISHQ9NSE2 258 aa22.08■■□□□ 1.13
USP48-205ENST00000421625 ETNK2Q9NVF9 386 aa22.08■■□□□ 1.13
USP48-205ENST00000421625 STYXL1Q9Y6J8 313 aa22.08■■□□□ 1.13
USP48-205ENST00000421625 ROR1Q01973 937 aa22.08■■□□□ 1.13
USP48-205ENST00000421625 DGKZQ13574 1117 aa22.08■■□□□ 1.13
USP48-205ENST00000421625 TBCCQ15814 346 aa22.08■■□□□ 1.13
USP48-205ENST00000421625 HADHQ16836 314 aaKnown RBP22.08■■□□□ 1.13
USP48-205ENST00000421625 SCARA5Q6ZMJ2 495 aa22.08■■□□□ 1.13
USP48-205ENST00000421625 GDPD5Q8WTR4 605 aa22.08■■□□□ 1.13
USP48-205ENST00000421625 CYTH4Q9UIA0 394 aa22.08■■□□□ 1.13
USP48-205ENST00000421625 LYPLA1O75608 230 aaPredicted RBP22.07■■□□□ 1.12
USP48-205ENST00000421625 CSH1P0DML2 217 aa22.07■■□□□ 1.12
USP48-205ENST00000421625 CSH2P0DML3 217 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms