RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 VRTNQ9H8Y1 702 aa17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 ZDHHC4Q9NPG8 344 aa17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 SPHK2Q9NRA0 654 aa17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 COMMD8Q9NX08 183 aa17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 CGNQ9P2M7 1197 aaKnown RBP17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 DEC1Q9P2X7 70 aa17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 PILRBQ9UKJ0 227 aa17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 SH3BP1Q9Y3L3 701 aa17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 CEP295Q9C0D2 2601 aa17.88■□□□□ 0.45
UPF3AP3-201ENST00000420996 SPTLC2O15270 562 aa17.88■□□□□ 0.45
UPF3AP3-201ENST00000420996 PHACTR2O75167 634 aa17.88■□□□□ 0.45
UPF3AP3-201ENST00000420996 PPP6R2O75170 966 aa17.88■□□□□ 0.45
UPF3AP3-201ENST00000420996 TULP3O75386 442 aa17.88■□□□□ 0.45
UPF3AP3-201ENST00000420996 EHHADHQ08426 723 aa17.88■□□□□ 0.45
UPF3AP3-201ENST00000420996 PEAR1Q5VY43 1037 aaPredicted RBP17.88■□□□□ 0.45
UPF3AP3-201ENST00000420996 PAQR9Q6ZVX9 377 aa17.88■□□□□ 0.45
UPF3AP3-201ENST00000420996 FAM35AQ86V20 835 aa17.88■□□□□ 0.45
UPF3AP3-201ENST00000420996 BBS7Q8IWZ6 715 aa17.88■□□□□ 0.45
UPF3AP3-201ENST00000420996 NELFCDQ8IXH7 590 aa17.88■□□□□ 0.45
UPF3AP3-201ENST00000420996 C12orf56Q8IXR9 622 aa17.88■□□□□ 0.45
UPF3AP3-201ENST00000420996 ZNF513Q8N8E2 541 aaPredicted RBP17.88■□□□□ 0.45
UPF3AP3-201ENST00000420996 NAT16Q8N8M0 369 aa17.88■□□□□ 0.45
UPF3AP3-201ENST00000420996 TNIP3Q96KP6 325 aa17.88■□□□□ 0.45
UPF3AP3-201ENST00000420996 CCSER2Q9H7U1 834 aa17.88■□□□□ 0.45
UPF3AP3-201ENST00000420996 DMAP1Q9NPF5 467 aaPredicted RBP17.88■□□□□ 0.45
UPF3AP3-201ENST00000420996 RALYQ9UKM9 306 aaKnown RBP17.88■□□□□ 0.45
UPF3AP3-201ENST00000420996 GON4LQ3T8J9 2241 aa17.88■□□□□ 0.45
UPF3AP3-201ENST00000420996 ADAMTS9Q9P2N4 1935 aa17.88■□□□□ 0.45
UPF3AP3-201ENST00000420996 FAM92AA1XBS5 289 aa17.87■□□□□ 0.45
UPF3AP3-201ENST00000420996 UPK3BL1B0FP48 263 aa17.87■□□□□ 0.45
UPF3AP3-201ENST00000420996 UPK3BL2E5RIL1 263 aa17.87■□□□□ 0.45
UPF3AP3-201ENST00000420996 AP5Z1O43299 807 aa17.87■□□□□ 0.45
UPF3AP3-201ENST00000420996 ZDHHC11BP0C7U3 371 aa17.87■□□□□ 0.45
UPF3AP3-201ENST00000420996 ITPKAP23677 461 aa17.87■□□□□ 0.45
UPF3AP3-201ENST00000420996 MAPK8P45983 427 aa17.87■□□□□ 0.45
UPF3AP3-201ENST00000420996 SLC5A3P53794 718 aa17.87■□□□□ 0.45
UPF3AP3-201ENST00000420996 CDH8P55286 799 aa17.87■□□□□ 0.45
UPF3AP3-201ENST00000420996 DUOXA1Q1HG43 343 aa17.87■□□□□ 0.45
UPF3AP3-201ENST00000420996 SLC36A4Q6YBV0 504 aa17.87■□□□□ 0.45
UPF3AP3-201ENST00000420996 UNC13DQ70J99 1090 aa17.87■□□□□ 0.45
UPF3AP3-201ENST00000420996 TMEM25Q86YD3 366 aa17.87■□□□□ 0.45
UPF3AP3-201ENST00000420996 TERB1Q8NA31 727 aa17.87■□□□□ 0.45
UPF3AP3-201ENST00000420996 CEP76Q8TAP6 659 aa17.87■□□□□ 0.45
UPF3AP3-201ENST00000420996 GATA6Q92908 595 aa17.87■□□□□ 0.45
UPF3AP3-201ENST00000420996 SMARCD1Q96GM5 515 aa17.87■□□□□ 0.45
UPF3AP3-201ENST00000420996 MED10Q9BTT4 135 aa17.87■□□□□ 0.45
UPF3AP3-201ENST00000420996 SMYD3Q9H7B4 428 aa17.87■□□□□ 0.45
UPF3AP3-201ENST00000420996 SLC6A14Q9UN76 642 aa17.87■□□□□ 0.45
UPF3AP3-201ENST00000420996 MYH10P35580 1976 aa17.87■□□□□ 0.45
UPF3AP3-201ENST00000420996 STX6O43752 255 aa17.86■□□□□ 0.45
UPF3AP3-201ENST00000420996 GABRG2P18507 467 aa17.86■□□□□ 0.45
UPF3AP3-201ENST00000420996 NTSR1P30989 418 aa17.86■□□□□ 0.45
UPF3AP3-201ENST00000420996 AP3M2P53677 418 aa17.86■□□□□ 0.45
UPF3AP3-201ENST00000420996 SEMA3BQ13214 749 aa17.86■□□□□ 0.45
UPF3AP3-201ENST00000420996 BMT2Q1RMZ1 405 aa17.86■□□□□ 0.45
UPF3AP3-201ENST00000420996 ANO4Q32M45 955 aa17.86■□□□□ 0.45
UPF3AP3-201ENST00000420996 ZNF667Q5HYK9 610 aa17.86■□□□□ 0.45
UPF3AP3-201ENST00000420996 C10orf76Q5T2E6 689 aa17.86■□□□□ 0.45
UPF3AP3-201ENST00000420996 PIP4P1Q86T03 277 aa17.86■□□□□ 0.45
UPF3AP3-201ENST00000420996 MAGEF1Q9HAY2 307 aa17.86■□□□□ 0.45
UPF3AP3-201ENST00000420996 GMIPQ9P107 970 aa17.86■□□□□ 0.45
UPF3AP3-201ENST00000420996 HCN2Q9UL51 889 aa17.86■□□□□ 0.45
UPF3AP3-201ENST00000420996 STARD13Q9Y3M8 1113 aa17.86■□□□□ 0.45
UPF3AP3-201ENST00000420996 EXOC3O60645 756 aa17.85■□□□□ 0.45
UPF3AP3-201ENST00000420996 CUTAO60888 179 aa17.85■□□□□ 0.45
UPF3AP3-201ENST00000420996 AP1G2O75843 785 aa17.85■□□□□ 0.45
UPF3AP3-201ENST00000420996 CFIP05156 583 aa17.85■□□□□ 0.45
UPF3AP3-201ENST00000420996 HOXB2P14652 356 aa17.85■□□□□ 0.45
UPF3AP3-201ENST00000420996 CASP4P49662 377 aa17.85■□□□□ 0.45
UPF3AP3-201ENST00000420996 RPL6Q02878 288 aaKnown RBP17.85■□□□□ 0.45
UPF3AP3-201ENST00000420996 BIRC3Q13489 604 aa17.85■□□□□ 0.45
UPF3AP3-201ENST00000420996 KNOP1Q1ED39 458 aaKnown RBP17.85■□□□□ 0.45
UPF3AP3-201ENST00000420996 ZNF699Q32M78 642 aa17.85■□□□□ 0.45
UPF3AP3-201ENST00000420996 SHC4Q6S5L8 630 aa17.85■□□□□ 0.45
UPF3AP3-201ENST00000420996 HTR3DQ70Z44 454 aa17.85■□□□□ 0.45
UPF3AP3-201ENST00000420996 RABEPKQ7Z6M1 372 aa17.85■□□□□ 0.45
UPF3AP3-201ENST00000420996 FUKQ8N0W3 1084 aa17.85■□□□□ 0.45
UPF3AP3-201ENST00000420996 PLEKHO2Q8TD55 490 aa17.85■□□□□ 0.45
UPF3AP3-201ENST00000420996 PARD3BQ8TEW8 1205 aa17.85■□□□□ 0.45
UPF3AP3-201ENST00000420996 WBP2Q969T9 261 aa17.85■□□□□ 0.45
UPF3AP3-201ENST00000420996 ATXN2Q99700 1313 aaKnown RBP17.85■□□□□ 0.45
UPF3AP3-201ENST00000420996 NACA2Q9H009 215 aa17.85■□□□□ 0.45
UPF3AP3-201ENST00000420996 CALCOCO1Q9P1Z2 691 aa17.85■□□□□ 0.45
UPF3AP3-201ENST00000420996 TFIP11Q9UBB9 837 aaKnown RBP17.85■□□□□ 0.45
UPF3AP3-201ENST00000420996 PVALEFA0A1B0GWK0 134 aa17.84■□□□□ 0.45
UPF3AP3-201ENST00000420996 A0A1W2PQF6 199 aa17.84■□□□□ 0.45
UPF3AP3-201ENST00000420996 ZBTB24O43167 697 aaPredicted RBP17.84■□□□□ 0.45
UPF3AP3-201ENST00000420996 TLR5O60602 858 aa17.84■□□□□ 0.45
UPF3AP3-201ENST00000420996 YEATS4O95619 227 aa17.84■□□□□ 0.45
UPF3AP3-201ENST00000420996 SERPINF2P08697 491 aa17.84■□□□□ 0.45
UPF3AP3-201ENST00000420996 IRF1P10914 325 aa17.84■□□□□ 0.45
UPF3AP3-201ENST00000420996 ATXN3P54252 364 aaPredicted RBP17.84■□□□□ 0.45
UPF3AP3-201ENST00000420996 CLDN10P78369 228 aa17.84■□□□□ 0.45
UPF3AP3-201ENST00000420996 GFPT1Q06210 699 aaPredicted RBP17.84■□□□□ 0.45
UPF3AP3-201ENST00000420996 ZNF33AQ06730 810 aa17.84■□□□□ 0.45
UPF3AP3-201ENST00000420996 NCOA4Q13772 614 aa17.84■□□□□ 0.45
UPF3AP3-201ENST00000420996 GRAMD4Q6IC98 578 aa17.84■□□□□ 0.45
UPF3AP3-201ENST00000420996 ACOT1Q86TX2 421 aa17.84■□□□□ 0.45
UPF3AP3-201ENST00000420996 MIB1Q86YT6 1006 aa17.84■□□□□ 0.45
UPF3AP3-201ENST00000420996 HDDC3Q8N4P3 179 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms