RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 LILRA6Q6PI73 481 aa14.94□□□□□ -0.02
SHMT1P1-201ENST00000419974 STRADAQ7RTN6 431 aa14.94□□□□□ -0.02
SHMT1P1-201ENST00000419974 ZNF572Q7Z3I7 529 aaPredicted RBP14.94□□□□□ -0.02
SHMT1P1-201ENST00000419974 ARHGAP18Q8N392 663 aa14.94□□□□□ -0.02
SHMT1P1-201ENST00000419974 UBL4BQ8N7F7 174 aa14.94□□□□□ -0.02
SHMT1P1-201ENST00000419974 MRPL43Q8N983 215 aaKnown RBP14.94□□□□□ -0.02
SHMT1P1-201ENST00000419974 ATAD1Q8NBU5 361 aa14.94□□□□□ -0.02
SHMT1P1-201ENST00000419974 JOSD2Q8TAC2 188 aa14.94□□□□□ -0.02
SHMT1P1-201ENST00000419974 OVCA2Q8WZ82 227 aa14.94□□□□□ -0.02
SHMT1P1-201ENST00000419974 PIWIL1Q96J94 861 aaKnown RBP14.94□□□□□ -0.02
SHMT1P1-201ENST00000419974 TGS1Q96RS0 853 aaKnown RBP14.94□□□□□ -0.02
SHMT1P1-201ENST00000419974 ABI2Q9NYB9 513 aaPredicted RBP14.94□□□□□ -0.02
SHMT1P1-201ENST00000419974 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.94□□□□□ -0.02
SHMT1P1-201ENST00000419974 GOLGA8SH3BPF8 625 aa14.93□□□□□ -0.02
SHMT1P1-201ENST00000419974 ENC1O14682 589 aa14.93□□□□□ -0.02
SHMT1P1-201ENST00000419974 ADAM12O43184 909 aa14.93□□□□□ -0.02
SHMT1P1-201ENST00000419974 LCP1P13796 627 aa14.93□□□□□ -0.02
SHMT1P1-201ENST00000419974 PDGFRAP16234 1089 aa14.93□□□□□ -0.02
SHMT1P1-201ENST00000419974 FLT3P36888 993 aa14.93□□□□□ -0.02
SHMT1P1-201ENST00000419974 PSEN1P49768 467 aa14.93□□□□□ -0.02
SHMT1P1-201ENST00000419974 TUBB4BP68371 445 aa14.93□□□□□ -0.02
SHMT1P1-201ENST00000419974 ITIH3Q06033 890 aa14.93□□□□□ -0.02
SHMT1P1-201ENST00000419974 SLC25A52Q3SY17 297 aa14.93□□□□□ -0.02
SHMT1P1-201ENST00000419974 CCDC14Q49A88 953 aa14.93□□□□□ -0.02
SHMT1P1-201ENST00000419974 SNX30Q5VWJ9 437 aa14.93□□□□□ -0.02
SHMT1P1-201ENST00000419974 GPRIN1Q7Z2K8 1008 aa14.93□□□□□ -0.02
SHMT1P1-201ENST00000419974 MON1AQ86VX9 555 aa14.93□□□□□ -0.02
SHMT1P1-201ENST00000419974 VSIG1Q86XK7 387 aa14.93□□□□□ -0.02
SHMT1P1-201ENST00000419974 RHOT1Q8IXI2 618 aa14.93□□□□□ -0.02
SHMT1P1-201ENST00000419974 RASGEF1CQ8N431 466 aa14.93□□□□□ -0.02
SHMT1P1-201ENST00000419974 RXFP2Q8WXD0 754 aa14.93□□□□□ -0.02
SHMT1P1-201ENST00000419974 ZNF592Q92610 1267 aa14.93□□□□□ -0.02
SHMT1P1-201ENST00000419974 MYRFLQ96LU7 910 aa14.93□□□□□ -0.02
SHMT1P1-201ENST00000419974 OSBPL9Q96SU4 736 aa14.93□□□□□ -0.02
SHMT1P1-201ENST00000419974 EMILIN2Q9BXX0 1053 aa14.93□□□□□ -0.02
SHMT1P1-201ENST00000419974 ULBP1Q9BZM6 244 aa14.93□□□□□ -0.02
SHMT1P1-201ENST00000419974 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.93□□□□□ -0.02
SHMT1P1-201ENST00000419974 VCANP13611 3396 aa14.93□□□□□ -0.02
SHMT1P1-201ENST00000419974 H3BNC9 293 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 DLL1O00548 723 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 TEX28O15482 410 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 SPOPO43791 374 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 LRCH4O75427 683 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 URI1O94763 535 aaPredicted RBP14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 PAPLNO95428 1278 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 FYNP06241 537 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 CA3P07451 260 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 ZDHHC11BP0C7U3 371 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 PSMA2P25787 234 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 SDC4P31431 198 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 CTNNB1P35222 781 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 AIF1P55008 147 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 DUSP4Q13115 394 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 EIF4EBP2Q13542 120 aaPredicted RBP14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 ADGRE1Q14246 886 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 SMC1AQ14683 1233 aaKnown RBP14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 TRNP1Q6NT89 227 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 DENND5BQ6ZUT9 1274 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 CREG2Q8IUH2 290 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 PSTKQ8IV42 348 aaKnown RBP14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 KATNAL2Q8IYT4 538 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 ACTRT1Q8TDG2 376 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 HDAC7Q8WUI4 952 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 TRMT2BQ96GJ1 504 aaKnown RBP14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 BTBD6Q96KE9 485 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 RPGRIP1Q96KN7 1286 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 TBCBQ99426 244 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 NPY6RQ99463 290 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 RHOBTB2Q9BYZ6 727 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 LMAN2LQ9H0V9 348 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 CRISPLD1Q9H336 500 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 CLIC5Q9NZA1 410 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 ASB3Q9Y575 518 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 PATJQ8NI35 1801 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 KIAA1671Q9BY89 1806 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 YJEFN3A6XGL0 299 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 ZNF487B1APH4 448 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 E7ENQ6 273 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 RNF8O76064 485 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 F9P00740 461 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 LTFP02788 710 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 ADH1AP07327 375 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 KRT7P08729 469 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 CNPP09543 421 aaKnown RBP14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 PPP3CCP48454 512 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 RWDD2BP57060 319 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 COPS2P61201 443 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 SLC25A11Q02978 314 aaKnown RBP14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 TAF5Q15542 800 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 HADHQ16836 314 aaKnown RBP14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 CC2D1AQ6P1N0 951 aaPredicted RBP14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 PHLDB2Q86SQ0 1253 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 ARFGAP1Q8N6T3 406 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 CLEC4CQ8WTT0 213 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 TEKT4Q8WW24 435 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 GOLGA1Q92805 767 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 PGLYRP2Q96PD5 576 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 GOLPH3Q9H4A6 298 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 TLR9Q9NR96 1032 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 ABCC13Q9NSE7 274 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms