RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 MEI1Q5TIA1 1274 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 CCDC181Q5TID7 509 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 DNAJC24Q6P3W2 148 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 DCLRE1AQ6PJP8 1040 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 LCLAT1Q6UWP7 414 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 TMEM86AQ8N2M4 240 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 C12orf29Q8N999 325 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 HDAC7Q8WUI4 952 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 OSBPL9Q96SU4 736 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 PSMB7Q99436 277 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 COLEC11Q9BWP8 271 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 GPR62Q9BZJ7 368 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 GOLPH3Q9H4A6 298 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 PLEKHA4Q9H4M7 779 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 ST7Q9NRC1 585 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 CHST7Q9NS84 486 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 ZDHHC7Q9NXF8 308 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 DLGAP2Q9P1A6 1054 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 TSPAN16Q9UKR8 245 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 STRIP2Q9ULQ0 834 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 SNX12Q9UMY4 172 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 PACSIN2Q9UNF0 486 aaPredicted RBP13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 SIT1Q9Y3P8 196 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 NUMBLQ9Y6R0 609 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 OTOGLQ3ZCN5 2332 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 MED19A0JLT2 244 aaPredicted RBP13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 ANHXE9PGG2 379 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 SRGAP2O75044 1071 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 MTA2O94776 668 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 PAPLNO95428 1278 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 SP9P0CG40 484 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 MMP8P22894 467 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 LMO2P25791 158 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 ADORA2BP29275 332 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 CDH5P33151 784 aaPredicted RBP13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 LHX1P48742 406 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 HADHBP55084 474 aaKnown RBP13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 SNX16P57768 344 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 AMPD2Q01433 879 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 CKAP4Q07065 602 aaKnown RBP13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 PPP1R26Q5T8A7 1209 aaPredicted RBP13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 C11orf63Q6NUN7 778 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 FUT10Q6P4F1 479 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 OSTM1Q86WC4 334 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 LRRC57Q8N9N7 239 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 IPO4Q8TEX9 1081 aaKnown RBP13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 HASPINQ8TF76 798 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 KBTBD7Q8WVZ9 684 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 C18orf8Q96DM3 657 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 HINFPQ9BQA5 517 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 PAAF1Q9BRP4 392 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 MED10Q9BTT4 135 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 SELENOOQ9BVL4 669 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 TLR10Q9BXR5 811 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 PRKD2Q9BZL6 878 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 FOXQ1Q9C009 403 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 MIS12Q9H081 205 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 DPEP3Q9H4B8 488 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 PARVAQ9NVD7 372 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 ANAPC7Q9UJX3 599 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 TIMM13Q9Y5L4 95 aaPredicted RBP13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 CEP250Q9BV73 2442 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 NCOR2Q9Y618 2525 aa13.85□□□□□ -0.19
HLA-DMB-258ENST00000418107 GOLGA8SH3BPF8 625 aa13.84□□□□□ -0.19
HLA-DMB-258ENST00000418107 I3L4J1 428 aa13.84□□□□□ -0.19
HLA-DMB-258ENST00000418107 MYO1FO00160 1098 aa13.84□□□□□ -0.19
HLA-DMB-258ENST00000418107 SPOPO43791 374 aa13.84□□□□□ -0.19
HLA-DMB-258ENST00000418107 KIF4AO95239 1232 aa13.84□□□□□ -0.19
HLA-DMB-258ENST00000418107 GLULP15104 373 aa13.84□□□□□ -0.19
HLA-DMB-258ENST00000418107 PRLRP16471 622 aa13.84□□□□□ -0.19
HLA-DMB-258ENST00000418107 CXCR5P32302 372 aa13.84□□□□□ -0.19
HLA-DMB-258ENST00000418107 BRCC3P46736 316 aa13.84□□□□□ -0.19
HLA-DMB-258ENST00000418107 PSMC1P62191 440 aaKnown RBP13.84□□□□□ -0.19
HLA-DMB-258ENST00000418107 USP41Q3LFD5 358 aa13.84□□□□□ -0.19
HLA-DMB-258ENST00000418107 CYP4A22Q5TCH4 519 aa13.84□□□□□ -0.19
HLA-DMB-258ENST00000418107 DCUN1D2Q6PH85 259 aa13.84□□□□□ -0.19
HLA-DMB-258ENST00000418107 LILRA6Q6PI73 481 aa13.84□□□□□ -0.19
HLA-DMB-258ENST00000418107 DGLUCYQ7Z3D6 616 aa13.84□□□□□ -0.19
HLA-DMB-258ENST00000418107 SLFN11Q7Z7L1 901 aa13.84□□□□□ -0.19
HLA-DMB-258ENST00000418107 C1orf210Q8IVY1 113 aa13.84□□□□□ -0.19
HLA-DMB-258ENST00000418107 CRYBG2Q8N1P7 616 aa13.84□□□□□ -0.19
HLA-DMB-258ENST00000418107 WDTC1Q8N5D0 677 aa13.84□□□□□ -0.19
HLA-DMB-258ENST00000418107 UBL4BQ8N7F7 174 aa13.84□□□□□ -0.19
HLA-DMB-258ENST00000418107 BTBD6Q96KE9 485 aa13.84□□□□□ -0.19
HLA-DMB-258ENST00000418107 RPP25Q9BUL9 199 aaKnown RBP13.84□□□□□ -0.19
HLA-DMB-258ENST00000418107 SLC2A4RGQ9NR83 387 aa13.84□□□□□ -0.19
HLA-DMB-258ENST00000418107 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.84□□□□□ -0.19
HLA-DMB-258ENST00000418107 DDX43Q9NXZ2 648 aaKnown RBP13.84□□□□□ -0.19
HLA-DMB-258ENST00000418107 FNIP2Q9P278 1114 aa13.84□□□□□ -0.19
HLA-DMB-258ENST00000418107 DSEQ9UL01 958 aa13.84□□□□□ -0.19
HLA-DMB-258ENST00000418107 GPR179Q6PRD1 2367 aa13.84□□□□□ -0.19
HLA-DMB-258ENST00000418107 CTAGE15A4D2H0 777 aa13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 KCNK3O14649 394 aa13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 HCRTO43612 131 aa13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 ZMYND10O75800 440 aa13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 C1RP00736 705 aa13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 CTAGE8P0CG41 777 aa13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 SETSIPP0DME0 302 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms