RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 TRAFD1O14545 582 aaPredicted RBP15.08■□□□□ 0
HDAC9-208ENST00000417496 NDC80O14777 642 aa15.08■□□□□ 0
HDAC9-208ENST00000417496 PRPSAP2O60256 369 aa15.08■□□□□ 0
HDAC9-208ENST00000417496 WFS1O76024 890 aa15.08■□□□□ 0
HDAC9-208ENST00000417496 HAUS5O94927 633 aa15.08■□□□□ 0
HDAC9-208ENST00000417496 DHRS4L1P0CG22 281 aa15.08■□□□□ 0
HDAC9-208ENST00000417496 MYL2P10916 166 aa15.08■□□□□ 0
HDAC9-208ENST00000417496 TFE3P19532 575 aaPredicted RBP15.08■□□□□ 0
HDAC9-208ENST00000417496 GPD1P21695 349 aa15.08■□□□□ 0
HDAC9-208ENST00000417496 STIP1P31948 543 aaKnown RBP15.08■□□□□ 0
HDAC9-208ENST00000417496 YWHAZP63104 245 aaKnown RBP15.08■□□□□ 0
HDAC9-208ENST00000417496 KRT81Q14533 505 aa15.08■□□□□ 0
HDAC9-208ENST00000417496 PRKD1Q15139 912 aaPredicted RBP15.08■□□□□ 0
HDAC9-208ENST00000417496 PPP6R3Q5H9R7 873 aaPredicted RBP15.08■□□□□ 0
HDAC9-208ENST00000417496 CELF3Q5SZQ8 465 aaKnown RBP15.08■□□□□ 0
HDAC9-208ENST00000417496 WDR78Q5VTH9 848 aa15.08■□□□□ 0
HDAC9-208ENST00000417496 ALYREFQ86V81 257 aaKnown RBP15.08■□□□□ 0
HDAC9-208ENST00000417496 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.08■□□□□ 0
HDAC9-208ENST00000417496 MICAL1Q8TDZ2 1067 aa15.08■□□□□ 0
HDAC9-208ENST00000417496 NAF1Q96HR8 494 aaKnown RBP15.08■□□□□ 0
HDAC9-208ENST00000417496 APOPT1Q96IL0 206 aa15.08■□□□□ 0
HDAC9-208ENST00000417496 FAM167AQ96KS9 214 aa15.08■□□□□ 0
HDAC9-208ENST00000417496 RNF157Q96PX1 679 aa15.08■□□□□ 0
HDAC9-208ENST00000417496 SRPK1Q96SB4 655 aaKnown RBP15.08■□□□□ 0
HDAC9-208ENST00000417496 LPIN3Q9BQK8 851 aa15.08■□□□□ 0
HDAC9-208ENST00000417496 FRMD8P1Q9BZ68 369 aaPredicted RBP15.08■□□□□ 0
HDAC9-208ENST00000417496 C2orf40Q9H1Z8 148 aa15.08■□□□□ 0
HDAC9-208ENST00000417496 SMYD2Q9NRG4 433 aa15.08■□□□□ 0
HDAC9-208ENST00000417496 TSPAN16Q9UKR8 245 aa15.08■□□□□ 0
HDAC9-208ENST00000417496 SSC5DA1L4H1 1573 aa15.08■□□□□ 0
HDAC9-208ENST00000417496 MGAMO43451 1857 aa15.07■□□□□ 0
HDAC9-208ENST00000417496 A0A087WZ62 844 aa15.07■□□□□ 0
HDAC9-208ENST00000417496 KITP10721 976 aa15.07■□□□□ 0
HDAC9-208ENST00000417496 SERPINB4P48594 390 aa15.07■□□□□ 0
HDAC9-208ENST00000417496 PTDSS1P48651 473 aaKnown RBP15.07■□□□□ 0
HDAC9-208ENST00000417496 SMAD1Q15797 465 aaKnown RBP15.07■□□□□ 0
HDAC9-208ENST00000417496 SLC10A6Q3KNW5 377 aa15.07■□□□□ 0
HDAC9-208ENST00000417496 CCDC14Q49A88 953 aa15.07■□□□□ 0
HDAC9-208ENST00000417496 RINLQ6ZS11 566 aa15.07■□□□□ 0
HDAC9-208ENST00000417496 ALKBH8Q96BT7 664 aaKnown RBP15.07■□□□□ 0
HDAC9-208ENST00000417496 FDXACB1Q9BRP7 624 aaPredicted RBP15.07■□□□□ 0
HDAC9-208ENST00000417496 B3GNT5Q9BYG0 378 aa15.07■□□□□ 0
HDAC9-208ENST00000417496 TXNRD2Q9NNW7 524 aa15.07■□□□□ 0
HDAC9-208ENST00000417496 MARCOQ9UEW3 520 aaPredicted RBP15.07■□□□□ 0
HDAC9-208ENST00000417496 FZD9O00144 591 aa15.07■□□□□ 0
HDAC9-208ENST00000417496 ENDOD1O94919 500 aa15.07■□□□□ 0
HDAC9-208ENST00000417496 C1QAP02745 245 aa15.07■□□□□ 0
HDAC9-208ENST00000417496 GRIA1P42261 906 aa15.07■□□□□ 0
HDAC9-208ENST00000417496 GABRB2P47870 512 aa15.07■□□□□ 0
HDAC9-208ENST00000417496 Q3C1V9 767 aa15.07■□□□□ 0
HDAC9-208ENST00000417496 MDH1BQ5I0G3 518 aa15.07■□□□□ 0
HDAC9-208ENST00000417496 C4orf50Q6ZRC1 276 aa15.07■□□□□ 0
HDAC9-208ENST00000417496 CAND1Q86VP6 1230 aaKnown RBP15.07■□□□□ 0
HDAC9-208ENST00000417496 PQLC3Q8N755 202 aa15.07■□□□□ 0
HDAC9-208ENST00000417496 PTCD3Q96EY7 689 aaKnown RBP15.07■□□□□ 0
HDAC9-208ENST00000417496 FGD4Q96M96 766 aa15.07■□□□□ 0
HDAC9-208ENST00000417496 CNPY3Q9BT09 278 aa15.07■□□□□ 0
HDAC9-208ENST00000417496 ZC3H7BQ9UGR2 993 aaKnown RBP15.07■□□□□ 0
HDAC9-208ENST00000417496 TNFSF13BQ9Y275 285 aa15.07■□□□□ 0
HDAC9-208ENST00000417496 GYG2O15488 501 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 VTNP04004 478 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 PFKMP08237 780 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 CCNG1P51959 295 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 ATXN1P54253 815 aaKnown RBP15.06■□□□□ 0
HDAC9-208ENST00000417496 PMF1Q6P1K2 205 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 TRMT10BQ6PF06 316 aaKnown RBP15.06■□□□□ 0
HDAC9-208ENST00000417496 APOBEC3FQ8IUX4 373 aaKnown RBP15.06■□□□□ 0
HDAC9-208ENST00000417496 MPP5Q8N3R9 675 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 NETO2Q8NC67 525 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 ARMC2Q8NEN0 867 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 PCDH19Q8TAB3 1148 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 PHACTR1Q9C0D0 580 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 NMUR2Q9GZQ4 415 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 FAM49BQ9NUQ9 324 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 CNTN3Q9P232 1028 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 TTLL3Q9Y4R7 772 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 COPEO14579 308 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 GSC2O15499 205 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 PCK1P35558 622 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 BCAR1P56945 870 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 MRPS5P82675 430 aaKnown RBP15.06■□□□□ 0
HDAC9-208ENST00000417496 SLC18A2Q05940 514 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 KPNB1Q14974 876 aaKnown RBP15.06■□□□□ 0
HDAC9-208ENST00000417496 HSF5Q4G112 596 aaPredicted RBP15.06■□□□□ 0
HDAC9-208ENST00000417496 ILDR2Q71H61 639 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 SLC26A11Q86WA9 606 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 FBXO27Q8NI29 283 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 WDR60Q8WVS4 1066 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 SKA1Q96BD8 255 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 BTBD10Q9BSF8 475 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 MIS12Q9H081 205 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 IQCGQ9H095 443 aaKnown RBP15.06■□□□□ 0
HDAC9-208ENST00000417496 SAR1AQ9NR31 198 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 TAS2R1Q9NYW7 299 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 LNPEPQ9UIQ6 1025 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 MAD1L1Q9Y6D9 718 aa15.06■□□□□ 0
HDAC9-208ENST00000417496 IRF6O14896 467 aa15.05■□□□□ 0
HDAC9-208ENST00000417496 CCDC22O60826 627 aa15.05■□□□□ 0
HDAC9-208ENST00000417496 PDHA1P08559 390 aa15.05■□□□□ 0
HDAC9-208ENST00000417496 IRX4P78413 519 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms