RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 CLIC5Q9NZA1 410 aa24.28■■□□□ 1.48
SMARCB1-205ENST00000417137 ARHGAP26Q9UNA1 814 aa24.28■■□□□ 1.48
SMARCB1-205ENST00000417137 A0A1W2PQH9 124 aa24.27■■□□□ 1.48
SMARCB1-205ENST00000417137 ZNF263O14978 683 aa24.27■■□□□ 1.48
SMARCB1-205ENST00000417137 CBFA2T2O43439 604 aa24.27■■□□□ 1.48
SMARCB1-205ENST00000417137 NARSO43776 548 aaKnown RBP24.27■■□□□ 1.48
SMARCB1-205ENST00000417137 TLR5O60602 858 aa24.27■■□□□ 1.48
SMARCB1-205ENST00000417137 OLFM2O95897 454 aa24.27■■□□□ 1.48
SMARCB1-205ENST00000417137 MBL2P11226 248 aaPredicted RBP24.27■■□□□ 1.48
SMARCB1-205ENST00000417137 GRM2Q14416 872 aa24.27■■□□□ 1.48
SMARCB1-205ENST00000417137 CC2D1AQ6P1N0 951 aaPredicted RBP24.27■■□□□ 1.48
SMARCB1-205ENST00000417137 ZNF677Q86XU0 584 aa24.27■■□□□ 1.48
SMARCB1-205ENST00000417137 ZNF276Q8N554 614 aa24.27■■□□□ 1.48
SMARCB1-205ENST00000417137 IRF7Q92985 503 aa24.27■■□□□ 1.48
SMARCB1-205ENST00000417137 EDEM3Q9BZQ6 932 aa24.27■■□□□ 1.48
SMARCB1-205ENST00000417137 RNF38Q9H0F5 515 aa24.27■■□□□ 1.48
SMARCB1-205ENST00000417137 BRD9Q9H8M2 597 aa24.27■■□□□ 1.48
SMARCB1-205ENST00000417137 IFNKQ9P0W0 207 aa24.27■■□□□ 1.48
SMARCB1-205ENST00000417137 WNT16Q9UBV4 365 aa24.27■■□□□ 1.48
SMARCB1-205ENST00000417137 FBXL21Q9UKT6 434 aa24.27■■□□□ 1.48
SMARCB1-205ENST00000417137 MYO6Q9UM54 1294 aa24.27■■□□□ 1.48
SMARCB1-205ENST00000417137 GREB1Q4ZG55 1949 aa24.27■■□□□ 1.48
SMARCB1-205ENST00000417137 CHADO15335 359 aa24.26■■□□□ 1.47
SMARCB1-205ENST00000417137 COCHO43405 550 aa24.26■■□□□ 1.47
SMARCB1-205ENST00000417137 GPR37L1O60883 481 aa24.26■■□□□ 1.47
SMARCB1-205ENST00000417137 RARGP13631 454 aa24.26■■□□□ 1.47
SMARCB1-205ENST00000417137 GDI1P31150 447 aa24.26■■□□□ 1.47
SMARCB1-205ENST00000417137 ATP5C1P36542 298 aaKnown RBP24.26■■□□□ 1.47
SMARCB1-205ENST00000417137 RPL34P49207 117 aaKnown RBP24.26■■□□□ 1.47
SMARCB1-205ENST00000417137 YWHAGP61981 247 aaKnown RBP eCLIP24.26■■□□□ 1.47
SMARCB1-205ENST00000417137 PLCB2Q00722 1185 aa24.26■■□□□ 1.47
SMARCB1-205ENST00000417137 FCHO2Q0JRZ9 810 aa24.26■■□□□ 1.47
SMARCB1-205ENST00000417137 ARHGAP29Q52LW3 1261 aa24.26■■□□□ 1.47
SMARCB1-205ENST00000417137 TRIM67Q6ZTA4 783 aa24.26■■□□□ 1.47
SMARCB1-205ENST00000417137 DDX42Q86XP3 938 aaKnown RBP eCLIP24.26■■□□□ 1.47
SMARCB1-205ENST00000417137 IRGQQ8WZA9 623 aa24.26■■□□□ 1.47
SMARCB1-205ENST00000417137 RSPRY1Q96DX4 576 aa24.26■■□□□ 1.47
SMARCB1-205ENST00000417137 SLC4A5Q9BY07 1137 aa24.26■■□□□ 1.47
SMARCB1-205ENST00000417137 CCSER2Q9H7U1 834 aa24.26■■□□□ 1.47
SMARCB1-205ENST00000417137 CCL26Q9Y258 94 aa24.26■■□□□ 1.47
SMARCB1-205ENST00000417137 MYH10P35580 1976 aa24.25■■□□□ 1.47
SMARCB1-205ENST00000417137 SART1O43290 800 aaKnown RBP24.25■■□□□ 1.47
SMARCB1-205ENST00000417137 CFHP08603 1231 aa24.25■■□□□ 1.47
SMARCB1-205ENST00000417137 TCF3P15923 654 aa24.25■■□□□ 1.47
SMARCB1-205ENST00000417137 HOXD11P31277 338 aaPredicted RBP24.25■■□□□ 1.47
SMARCB1-205ENST00000417137 KLHDC10Q6PID8 442 aa24.25■■□□□ 1.47
SMARCB1-205ENST00000417137 SCD5Q86SK9 330 aa24.25■■□□□ 1.47
SMARCB1-205ENST00000417137 TMEM35BQ8NCS4 154 aa24.25■■□□□ 1.47
SMARCB1-205ENST00000417137 GOLGA1Q92805 767 aa24.25■■□□□ 1.47
SMARCB1-205ENST00000417137 IQCDQ96DY2 449 aa24.25■■□□□ 1.47
SMARCB1-205ENST00000417137 SMOC2Q9H3U7 446 aa24.25■■□□□ 1.47
SMARCB1-205ENST00000417137 NMUR1Q9HB89 426 aa24.25■■□□□ 1.47
SMARCB1-205ENST00000417137 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.25■■□□□ 1.47
SMARCB1-205ENST00000417137 PGFP49763 221 aa24.24■■□□□ 1.47
SMARCB1-205ENST00000417137 DAOAP59103 153 aa24.24■■□□□ 1.47
SMARCB1-205ENST00000417137 FIGNQ5HY92 759 aa24.24■■□□□ 1.47
SMARCB1-205ENST00000417137 C10orf120Q5SQS8 335 aa24.24■■□□□ 1.47
SMARCB1-205ENST00000417137 TAF3Q5VWG9 929 aa24.24■■□□□ 1.47
SMARCB1-205ENST00000417137 BTBD8Q5XKL5 378 aa24.24■■□□□ 1.47
SMARCB1-205ENST00000417137 TMEM110Q86TL2 294 aa24.24■■□□□ 1.47
SMARCB1-205ENST00000417137 NOP9Q86U38 636 aaKnown RBP24.24■■□□□ 1.47
SMARCB1-205ENST00000417137 PASD1Q8IV76 773 aa24.24■■□□□ 1.47
SMARCB1-205ENST00000417137 KIAA1958Q8N8K9 716 aa24.24■■□□□ 1.47
SMARCB1-205ENST00000417137 EPS8L1Q8TE68 723 aa24.24■■□□□ 1.47
SMARCB1-205ENST00000417137 SH3RF2Q8TEC5 729 aa24.24■■□□□ 1.47
SMARCB1-205ENST00000417137 DNASE1L2Q92874 299 aa24.24■■□□□ 1.47
SMARCB1-205ENST00000417137 LRRC3BQ96PB8 259 aa24.24■■□□□ 1.47
SMARCB1-205ENST00000417137 TRPV5Q9NQA5 729 aa24.24■■□□□ 1.47
SMARCB1-205ENST00000417137 OSER1Q9NX31 292 aa24.24■■□□□ 1.47
SMARCB1-205ENST00000417137 DNMT3LQ9UJW3 386 aa24.24■■□□□ 1.47
SMARCB1-205ENST00000417137 CPQQ9Y646 472 aa24.24■■□□□ 1.47
SMARCB1-205ENST00000417137 MYO10Q9HD67 2058 aa24.23■■□□□ 1.47
SMARCB1-205ENST00000417137 LEFTY2O00292 366 aa24.23■■□□□ 1.47
SMARCB1-205ENST00000417137 LSM8O95777 96 aaKnown RBP24.23■■□□□ 1.47
SMARCB1-205ENST00000417137 FERP16591 822 aa24.23■■□□□ 1.47
SMARCB1-205ENST00000417137 GOLGA8FQ08AF8 430 aa24.23■■□□□ 1.47
SMARCB1-205ENST00000417137 GOLGA8DPQ0D2H9 430 aa24.23■■□□□ 1.47
SMARCB1-205ENST00000417137 PDCLQ13371 301 aa24.23■■□□□ 1.47
SMARCB1-205ENST00000417137 RSRC2Q7L4I2 434 aaKnown RBP24.23■■□□□ 1.47
SMARCB1-205ENST00000417137 WDTC1Q8N5D0 677 aa24.23■■□□□ 1.47
SMARCB1-205ENST00000417137 TTC16Q8NEE8 873 aa24.23■■□□□ 1.47
SMARCB1-205ENST00000417137 DDX1Q92499 740 aaKnown RBP24.23■■□□□ 1.47
SMARCB1-205ENST00000417137 PPP1R13BQ96KQ4 1090 aa24.23■■□□□ 1.47
SMARCB1-205ENST00000417137 MIS12Q9H081 205 aa24.23■■□□□ 1.47
SMARCB1-205ENST00000417137 ABCC13Q9NSE7 274 aa24.23■■□□□ 1.47
SMARCB1-205ENST00000417137 OLA1Q9NTK5 396 aaKnown RBP24.23■■□□□ 1.47
SMARCB1-205ENST00000417137 PIK3R2O00459 728 aa24.22■■□□□ 1.47
SMARCB1-205ENST00000417137 GABBR2O75899 941 aa24.22■■□□□ 1.47
SMARCB1-205ENST00000417137 CDR2Q01850 454 aa24.22■■□□□ 1.47
SMARCB1-205ENST00000417137 ARID5AQ03989 594 aa24.22■■□□□ 1.47
SMARCB1-205ENST00000417137 MTF1Q14872 753 aa24.22■■□□□ 1.47
SMARCB1-205ENST00000417137 ZNF77Q15935 545 aa24.22■■□□□ 1.47
SMARCB1-205ENST00000417137 BSPRYQ5W0U4 402 aa24.22■■□□□ 1.47
SMARCB1-205ENST00000417137 SCUBE3Q8IX30 993 aa24.22■■□□□ 1.47
SMARCB1-205ENST00000417137 ZNF397Q8NF99 534 aaPredicted RBP24.22■■□□□ 1.47
SMARCB1-205ENST00000417137 CSGALNACT1Q8TDX6 532 aa24.22■■□□□ 1.47
SMARCB1-205ENST00000417137 RNF139Q8WU17 664 aa24.22■■□□□ 1.47
SMARCB1-205ENST00000417137 NDRG1Q92597 394 aaKnown RBP24.22■■□□□ 1.47
SMARCB1-205ENST00000417137 TRIM62Q9BVG3 475 aa24.22■■□□□ 1.47
SMARCB1-205ENST00000417137 XPO4Q9C0E2 1151 aaKnown RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms