RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 C1QL1O75973 258 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 OLFM2O95897 454 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 TMEM191BP0C7N4 346 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 ITPKBP27987 946 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 EIF2DP41214 584 aaKnown RBP9.96□□□□□ -0.82
LINC01238-201ENST00000416204 UBA7P41226 1012 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 CASP5P51878 434 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 HMGN5P82970 282 aaKnown RBP9.96□□□□□ -0.82
LINC01238-201ENST00000416204 BNC1Q01954 994 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 SLC14A1Q13336 389 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 TDRD10Q5VZ19 366 aaKnown RBP9.96□□□□□ -0.82
LINC01238-201ENST00000416204 GRAMD4Q6IC98 578 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 VSTM1Q6UX27 236 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 TPGS1Q6ZTW0 290 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 ZNF720Q7Z2F6 126 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 TRMT11Q7Z4G4 463 aaKnown RBP9.96□□□□□ -0.82
LINC01238-201ENST00000416204 RABEPKQ7Z6M1 372 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 TERB1Q8NA31 727 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 CACTINQ8WUQ7 758 aaKnown RBP9.96□□□□□ -0.82
LINC01238-201ENST00000416204 KCNN1Q92952 543 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 FBXO32Q969P5 355 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 CALML4Q96GE6 196 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 TOE1Q96GM8 510 aaKnown RBP9.96□□□□□ -0.82
LINC01238-201ENST00000416204 HPDLQ96IR7 371 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 ZFRQ96KR1 1074 aaKnown RBP9.96□□□□□ -0.82
LINC01238-201ENST00000416204 TTLL2Q9BWV7 592 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 GPR174Q9BXC1 333 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 FGFBP2Q9BYJ0 223 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 SPHK2Q9NRA0 654 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 TOR4AQ9NXH8 423 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 ITGA11Q9UKX5 1188 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 CDH9Q9ULB4 789 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.96□□□□□ -0.82
LINC01238-201ENST00000416204 SLCO1B1Q9Y6L6 691 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 MAST4O15021 2626 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 KCNK3O14649 394 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 TRIM66O15016 1216 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 CILPO75339 1184 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 ZNF217O75362 1048 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 GNSP15586 552 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 PGFP49763 221 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 C19orf57Q0VDD7 668 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 HLA-BQ31612 363 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 SYCP2LQ5T4T6 812 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 SDE2Q6IQ49 451 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 LAYNQ6UX15 382 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 TMPRSS7Q7RTY8 843 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 SYCP3Q8IZU3 236 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 SCAMP5Q8TAC9 235 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 MYCBPAPQ8TBZ2 947 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 RHBDD1Q8TEB9 315 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 SNX19Q92543 992 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 ELMO3Q96BJ8 720 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 ZNF419Q96HQ0 510 aaPredicted RBP9.95□□□□□ -0.82
LINC01238-201ENST00000416204 MRGPRX1Q96LB2 322 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 KCNK16Q96T55 309 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 SNX25Q9H3E2 840 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 FAM124BQ9H5Z6 455 aaPredicted RBP9.95□□□□□ -0.82
LINC01238-201ENST00000416204 MRPL44Q9H9J2 332 aaKnown RBP9.95□□□□□ -0.82
LINC01238-201ENST00000416204 CD248Q9HCU0 757 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 SCUBE2Q9NQ36 999 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 TM7SF3Q9NS93 570 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 PLK2Q9NYY3 685 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 GMIPQ9P107 970 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 TBC1D14Q9P2M4 693 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 PLXND1Q9Y4D7 1925 aa9.95□□□□□ -0.82
LINC01238-201ENST00000416204 URB1O60287 2271 aaKnown RBP9.95□□□□□ -0.82
LINC01238-201ENST00000416204 MYO18AQ92614 2054 aaKnown RBP9.94□□□□□ -0.82
LINC01238-201ENST00000416204 A0A1B0GTW7 788 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 A0A1B0GVT2 93 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 E2F8A0AVK6 867 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 KCNJ18B7U540 433 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 PYCARD-AS1I3L0S3 204 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 HOXC11O43248 304 aaPredicted RBP9.94□□□□□ -0.82
LINC01238-201ENST00000416204 GCNT3O95395 438 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 TBX18O95935 607 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 NCAM1P13591 858 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 YWHAQP27348 245 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 CD6P30203 668 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 GNL1P36915 607 aaPredicted RBP9.94□□□□□ -0.82
LINC01238-201ENST00000416204 NOP14P78316 857 aaKnown RBP9.94□□□□□ -0.82
LINC01238-201ENST00000416204 IL9RQ01113 521 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 MYO1EQ12965 1108 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 POSTNQ15063 836 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 RILPL1Q5EBL4 403 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 WDR45BQ5MNZ6 344 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 DCAF12L1Q5VU92 463 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 USP49Q70CQ1 688 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 FAM124AQ86V42 546 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 DDX42Q86XP3 938 aaKnown RBP eCLIP9.94□□□□□ -0.82
LINC01238-201ENST00000416204 NT5DC4Q86YG4 428 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 KRI1Q8N9T8 703 aaKnown RBP9.94□□□□□ -0.82
LINC01238-201ENST00000416204 OR6B3Q8NGW1 331 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 SCFD1Q8WVM8 642 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 SLC39A7Q92504 469 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 LARP4BQ92615 738 aaKnown RBP9.94□□□□□ -0.82
LINC01238-201ENST00000416204 SLITRK1Q96PX8 696 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 ACCSQ96QU6 501 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 BBS2Q9BXC9 721 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 B3GNT5Q9BYG0 378 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms