RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 EYA2O00167 538 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 PRRG2O14669 202 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 CAPN9O14815 690 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 SMAD7O15105 426 aaKnown RBP4.15□□□□□ -1.75
LINC01048-201ENST00000414480 TLR3O15455 904 aaKnown RBP4.15□□□□□ -1.75
LINC01048-201ENST00000414480 MAGEB3O15480 346 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 ADCY3O60266 1144 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 TSPAN3O60637 253 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 CTNND1O60716 968 aaKnown RBP4.15□□□□□ -1.75
LINC01048-201ENST00000414480 PQBP1O60828 265 aaKnown RBP4.15□□□□□ -1.75
LINC01048-201ENST00000414480 CBFA2T3O75081 653 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 ZC3H11AO75152 810 aaKnown RBP eCLIP4.15□□□□□ -1.75
LINC01048-201ENST00000414480 UFL1O94874 794 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 KLHL18O94889 574 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 SEC31AO94979 1220 aaKnown RBP4.15□□□□□ -1.75
LINC01048-201ENST00000414480 FSBPO95073 299 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 CEACAM5P06731 702 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 ENO2P09104 434 aaPredicted RBP4.15□□□□□ -1.75
LINC01048-201ENST00000414480 PNMA6AP0CW24 399 aaPredicted RBP4.15□□□□□ -1.75
LINC01048-201ENST00000414480 IDO1P14902 403 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 HPGDP15428 266 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 MPSTP25325 297 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 CFPP27918 469 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 NUP62P37198 522 aaPredicted RBP4.15□□□□□ -1.75
LINC01048-201ENST00000414480 CACNB3P54284 484 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 ALDH18A1P54886 795 aaKnown RBP4.15□□□□□ -1.75
LINC01048-201ENST00000414480 SLC26A5P58743 744 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 EIF4A1P60842 406 aaKnown RBP4.15□□□□□ -1.75
LINC01048-201ENST00000414480 SSTP61278 116 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 VBP1P61758 197 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 GSTO1P78417 241 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 COG7P83436 770 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 SMAD3P84022 425 aaKnown RBP4.15□□□□□ -1.75
LINC01048-201ENST00000414480 CDK17Q00537 523 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 LRMPQ12912 555 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 CBX3Q13185 183 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 CDK5R2Q13319 367 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 STIM1Q13586 685 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 BYSLQ13895 437 aaKnown RBP4.15□□□□□ -1.75
LINC01048-201ENST00000414480 VGLL4Q14135 290 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 DOC2AQ14183 400 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 FRG1Q14331 258 aaKnown RBP4.15□□□□□ -1.75
LINC01048-201ENST00000414480 SHHQ15465 462 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 KCNMB1Q16558 191 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 LRRC26Q2I0M4 334 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 ZNF674Q2M3X9 581 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 ERCC6LQ2NKX8 1250 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 SUPT20HL1Q3ZLR7 823 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 USH1GQ495M9 461 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 USP39Q53GS9 565 aaKnown RBP4.15□□□□□ -1.75
LINC01048-201ENST00000414480 PPP6R3Q5H9R7 873 aaPredicted RBP4.15□□□□□ -1.75
LINC01048-201ENST00000414480 MDH1BQ5I0G3 518 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 C9orf50Q5SZB4 431 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 FAM205BPQ63HN1 556 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 HAUS3Q68CZ6 603 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 ALG1LQ6GMV1 187 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 CEP85Q6P2H3 762 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 WDR73Q6P4I2 378 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 DRICH1Q6PGQ1 229 aaPredicted RBP4.15□□□□□ -1.75
LINC01048-201ENST00000414480 SLC23A3Q6PIS1 610 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 SLC30A9Q6PML9 568 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 RAB11FIP2Q7L804 512 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 HDXQ7Z353 690 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 CABP7Q86V35 215 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 KRT73Q86Y46 540 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 SIAH1Q8IUQ4 282 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 CCNJLQ8IV13 435 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 SYCP3Q8IZU3 236 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 ANKRD35Q8N283 1001 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 TCAIMQ8N3R3 496 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 CELF2-AS1Q8N7Q2 184 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 PLBD2Q8NHP8 589 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.15□□□□□ -1.75
LINC01048-201ENST00000414480 DEPTORQ8TB45 409 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 NINJ1Q92982 152 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 SLC35B4Q969S0 331 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 INTS12Q96CB8 462 aaKnown RBP4.15□□□□□ -1.75
LINC01048-201ENST00000414480 RBM41Q96IZ5 413 aaKnown RBP4.15□□□□□ -1.75
LINC01048-201ENST00000414480 RPGRIP1Q96KN7 1286 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 PHACTR3Q96KR7 559 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 UBXN10Q96LJ8 280 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 ZSCAN31Q96LW9 406 aaPredicted RBP4.15□□□□□ -1.75
LINC01048-201ENST00000414480 CCDC138Q96M89 665 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 CMTM3Q96MX0 182 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 TEPSINQ96N21 525 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 FERD3LQ96RJ6 166 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 TRIM56Q9BRZ2 755 aaKnown RBP4.15□□□□□ -1.75
LINC01048-201ENST00000414480 WDR18Q9BV38 432 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 NUSAP1Q9BXS6 441 aaKnown RBP4.15□□□□□ -1.75
LINC01048-201ENST00000414480 GCOM2Q9BZD3 368 aaPredicted RBP4.15□□□□□ -1.75
LINC01048-201ENST00000414480 NUF2Q9BZD4 464 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 INTS2Q9H0H0 1204 aaKnown RBP4.15□□□□□ -1.75
LINC01048-201ENST00000414480 WNT5BQ9H1J7 359 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 TNKS2Q9H2K2 1166 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 THAP9Q9H5L6 903 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 XKR8Q9H6D3 395 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 C11orf49Q9H6J7 331 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 CLK4Q9HAZ1 481 aaKnown RBP4.15□□□□□ -1.75
LINC01048-201ENST00000414480 BATF3Q9NR55 127 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 NMRK1Q9NWW6 199 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms