RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 MAGEA9P43362 315 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 ACADSBP45954 432 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 COPB1P53618 953 aaKnown RBP15.47■□□□□ 0.07
CHD1-202ENST00000414220 RAPGEF1Q13905 1077 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 ZNF77Q15935 545 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 MEA1Q16626 185 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 RAB41Q5JT25 222 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 KLHDC7AQ5VTJ3 777 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 BTBD8Q5XKL5 378 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 GJB7Q6PEY0 223 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 KLHDC10Q6PID8 442 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 GPRIN1Q7Z2K8 1008 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 ZNF276Q8N554 614 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 ZNF606Q8WXB4 792 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 SHC3Q92529 594 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 ATP2A3Q93084 1043 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 ZFYVE19Q96K21 471 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 LRRC3BQ96PB8 259 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 NOX5Q96PH1 765 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 FAM83CQ9BQN1 747 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 LSM14BQ9BX40 385 aaKnown RBP15.47■□□□□ 0.07
CHD1-202ENST00000414220 RNF38Q9H0F5 515 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 PDCL3Q9H2J4 239 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 CYLDQ9NQC7 956 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 CNGB3Q9NQW8 809 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 SMPD4Q9NXE4 827 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 DNMT3LQ9UJW3 386 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 LSM7Q9UK45 103 aaKnown RBP15.47■□□□□ 0.07
CHD1-202ENST00000414220 CEP83Q9Y592 693 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 MUC3AQ02505 3323 aa15.46■□□□□ 0.07
CHD1-202ENST00000414220 A0A1W2PQH9 124 aa15.46■□□□□ 0.07
CHD1-202ENST00000414220 E2F8A0AVK6 867 aa15.46■□□□□ 0.07
CHD1-202ENST00000414220 FAM170BA6NMN3 283 aa15.46■□□□□ 0.07
CHD1-202ENST00000414220 SART1O43290 800 aaKnown RBP15.46■□□□□ 0.07
CHD1-202ENST00000414220 FBXO21O94952 628 aa15.46■□□□□ 0.07
CHD1-202ENST00000414220 KRT9P35527 623 aa15.46■□□□□ 0.07
CHD1-202ENST00000414220 YWHAGP61981 247 aaKnown RBP eCLIP15.46■□□□□ 0.07
CHD1-202ENST00000414220 UBXN1Q04323 297 aa15.46■□□□□ 0.07
CHD1-202ENST00000414220 USP4Q13107 963 aa15.46■□□□□ 0.07
CHD1-202ENST00000414220 C10orf120Q5SQS8 335 aa15.46■□□□□ 0.07
CHD1-202ENST00000414220 RSRC2Q7L4I2 434 aaKnown RBP15.46■□□□□ 0.07
CHD1-202ENST00000414220 RNF139Q8WU17 664 aa15.46■□□□□ 0.07
CHD1-202ENST00000414220 SLC35F5Q8WV83 523 aa15.46■□□□□ 0.07
CHD1-202ENST00000414220 TFAP2BQ92481 460 aa15.46■□□□□ 0.07
CHD1-202ENST00000414220 SECISBP2LQ93073 1101 aaKnown RBP15.46■□□□□ 0.07
CHD1-202ENST00000414220 DDX23Q9BUQ8 820 aaKnown RBP15.46■□□□□ 0.07
CHD1-202ENST00000414220 EBF3Q9H4W6 596 aa15.46■□□□□ 0.07
CHD1-202ENST00000414220 CCSER2Q9H7U1 834 aa15.46■□□□□ 0.07
CHD1-202ENST00000414220 LTB4R2Q9NPC1 389 aa15.46■□□□□ 0.07
CHD1-202ENST00000414220 PLCB1Q9NQ66 1216 aa15.46■□□□□ 0.07
CHD1-202ENST00000414220 ST7Q9NRC1 585 aa15.46■□□□□ 0.07
CHD1-202ENST00000414220 OLA1Q9NTK5 396 aaKnown RBP15.46■□□□□ 0.07
CHD1-202ENST00000414220 GTSE1Q9NYZ3 720 aa15.46■□□□□ 0.07
CHD1-202ENST00000414220 CFAP97Q9P2B7 532 aa15.46■□□□□ 0.07
CHD1-202ENST00000414220 STRIP2Q9ULQ0 834 aa15.46■□□□□ 0.07
CHD1-202ENST00000414220 ARIH1Q9Y4X5 557 aaPredicted RBP15.46■□□□□ 0.07
CHD1-202ENST00000414220 LRRC10BA6NIK2 292 aa15.45■□□□□ 0.06
CHD1-202ENST00000414220 GOLGA6L19H0YKK7 550 aa15.45■□□□□ 0.06
CHD1-202ENST00000414220 ARNTLO00327 626 aa15.45■□□□□ 0.06
CHD1-202ENST00000414220 LCP1P13796 627 aa15.45■□□□□ 0.06
CHD1-202ENST00000414220 UCHL3P15374 230 aa15.45■□□□□ 0.06
CHD1-202ENST00000414220 COG7P83436 770 aa15.45■□□□□ 0.06
CHD1-202ENST00000414220 ADIGQ0VDE8 80 aa15.45■□□□□ 0.06
CHD1-202ENST00000414220 KCNMA1Q12791 1236 aa15.45■□□□□ 0.06
CHD1-202ENST00000414220 LRRC32Q14392 662 aa15.45■□□□□ 0.06
CHD1-202ENST00000414220 CWF19L1Q69YN2 538 aaKnown RBP15.45■□□□□ 0.06
CHD1-202ENST00000414220 PM20D1Q6GTS8 502 aa15.45■□□□□ 0.06
CHD1-202ENST00000414220 SCML4Q8N228 414 aa15.45■□□□□ 0.06
CHD1-202ENST00000414220 PJA1Q8NG27 643 aa15.45■□□□□ 0.06
CHD1-202ENST00000414220 NEK11Q8NG66 645 aa15.45■□□□□ 0.06
CHD1-202ENST00000414220 STK32AQ8WU08 396 aa15.45■□□□□ 0.06
CHD1-202ENST00000414220 IRGQQ8WZA9 623 aa15.45■□□□□ 0.06
CHD1-202ENST00000414220 OTUB2Q96DC9 234 aa15.45■□□□□ 0.06
CHD1-202ENST00000414220 TRIM62Q9BVG3 475 aa15.45■□□□□ 0.06
CHD1-202ENST00000414220 STK33Q9BYT3 514 aa15.45■□□□□ 0.06
CHD1-202ENST00000414220 ULBP1Q9BZM6 244 aa15.45■□□□□ 0.06
CHD1-202ENST00000414220 SIX2Q9NPC8 291 aa15.45■□□□□ 0.06
CHD1-202ENST00000414220 ABCC13Q9NSE7 274 aa15.45■□□□□ 0.06
CHD1-202ENST00000414220 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.45■□□□□ 0.06
CHD1-202ENST00000414220 NUP210Q8TEM1 1887 aaPredicted RBP15.44■□□□□ 0.06
CHD1-202ENST00000414220 LGALS16A8MUM7 142 aa15.44■□□□□ 0.06
CHD1-202ENST00000414220 SPECC1L-ADORA2AF8WAN1 911 aa15.44■□□□□ 0.06
CHD1-202ENST00000414220 ZNF18P17022 549 aa15.44■□□□□ 0.06
CHD1-202ENST00000414220 RGS7P49802 495 aa15.44■□□□□ 0.06
CHD1-202ENST00000414220 VCPP55072 806 aaKnown RBP15.44■□□□□ 0.06
CHD1-202ENST00000414220 DRAP1Q14919 205 aaPredicted RBP15.44■□□□□ 0.06
CHD1-202ENST00000414220 NCAPHQ15003 741 aa15.44■□□□□ 0.06
CHD1-202ENST00000414220 PKDCCQ504Y2 493 aa15.44■□□□□ 0.06
CHD1-202ENST00000414220 TMEM105Q8N8V8 129 aa15.44■□□□□ 0.06
CHD1-202ENST00000414220 CCDC26Q8TAB7 109 aa15.44■□□□□ 0.06
CHD1-202ENST00000414220 TTC8Q8TAM2 541 aa15.44■□□□□ 0.06
CHD1-202ENST00000414220 SPAG5Q96R06 1193 aa15.44■□□□□ 0.06
CHD1-202ENST00000414220 FOXQ1Q9C009 403 aa15.44■□□□□ 0.06
CHD1-202ENST00000414220 NMUR1Q9HB89 426 aa15.44■□□□□ 0.06
CHD1-202ENST00000414220 RASAL2Q9UJF2 1139 aa15.44■□□□□ 0.06
CHD1-202ENST00000414220 NDRG2Q9UN36 371 aaKnown RBP15.44■□□□□ 0.06
CHD1-202ENST00000414220 ZNF510Q9Y2H8 683 aa15.44■□□□□ 0.06
CHD1-202ENST00000414220 WNT6Q9Y6F9 365 aa15.44■□□□□ 0.06
CHD1-202ENST00000414220 MYH10P35580 1976 aa15.44■□□□□ 0.06
CHD1-202ENST00000414220 TULP2O00295 520 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms