RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 ATP8B3O60423 1300 aa15.12■□□□□ 0.01
HLA-DQB2-229ENST00000411527 AP5Z1O43299 807 aa15.11■□□□□ 0.01
HLA-DQB2-229ENST00000411527 HYAL3O43820 417 aaPredicted RBP15.11■□□□□ 0.01
HLA-DQB2-229ENST00000411527 PHACTR2O75167 634 aa15.11■□□□□ 0.01
HLA-DQB2-229ENST00000411527 CLSTN1O94985 981 aa15.11■□□□□ 0.01
HLA-DQB2-229ENST00000411527 STAU1O95793 577 aaKnown RBP15.11■□□□□ 0.01
HLA-DQB2-229ENST00000411527 IRF1P10914 325 aa15.11■□□□□ 0.01
HLA-DQB2-229ENST00000411527 GABRG2P18507 467 aa15.11■□□□□ 0.01
HLA-DQB2-229ENST00000411527 ATICP31939 592 aa15.11■□□□□ 0.01
HLA-DQB2-229ENST00000411527 WASP42768 502 aa15.11■□□□□ 0.01
HLA-DQB2-229ENST00000411527 ATXN3P54252 364 aaPredicted RBP15.11■□□□□ 0.01
HLA-DQB2-229ENST00000411527 CDH8P55286 799 aa15.11■□□□□ 0.01
HLA-DQB2-229ENST00000411527 RPL6Q02878 288 aaKnown RBP15.11■□□□□ 0.01
HLA-DQB2-229ENST00000411527 PREPLQ4J6C6 727 aaPredicted RBP15.11■□□□□ 0.01
HLA-DQB2-229ENST00000411527 SNX30Q5VWJ9 437 aa15.11■□□□□ 0.01
HLA-DQB2-229ENST00000411527 PAQR9Q6ZVX9 377 aa15.11■□□□□ 0.01
HLA-DQB2-229ENST00000411527 TMEM25Q86YD3 366 aa15.11■□□□□ 0.01
HLA-DQB2-229ENST00000411527 KCNV2Q8TDN2 545 aa15.11■□□□□ 0.01
HLA-DQB2-229ENST00000411527 WBP2Q969T9 261 aa15.11■□□□□ 0.01
HLA-DQB2-229ENST00000411527 SYAP1Q96A49 352 aaPredicted RBP15.11■□□□□ 0.01
HLA-DQB2-229ENST00000411527 DHX58Q96C10 678 aa15.11■□□□□ 0.01
HLA-DQB2-229ENST00000411527 GTPBP2Q9BX10 602 aaKnown RBP15.11■□□□□ 0.01
HLA-DQB2-229ENST00000411527 GZF1Q9H116 711 aaPredicted RBP15.11■□□□□ 0.01
HLA-DQB2-229ENST00000411527 XYLT2Q9H1B5 865 aa15.11■□□□□ 0.01
HLA-DQB2-229ENST00000411527 CUEDC2Q9H467 287 aa15.11■□□□□ 0.01
HLA-DQB2-229ENST00000411527 FSCN3Q9NQT6 498 aa15.11■□□□□ 0.01
HLA-DQB2-229ENST00000411527 MYH10P35580 1976 aa15.11■□□□□ 0.01
HLA-DQB2-229ENST00000411527 CACNA1GO43497 2377 aa15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 SPAARA0A1B0GVQ0 90 aa15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 TRIM24O15164 1050 aa15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 HOXC11O43248 304 aaPredicted RBP15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 HOXB2P14652 356 aa15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 HOXD12P35452 270 aa15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 NASPP49321 788 aaPredicted RBP15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 SLC5A3P53794 718 aa15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 SNRPFP62306 86 aaKnown RBP15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 SIM1P81133 766 aaPredicted RBP15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 GFPT1Q06210 699 aaPredicted RBP15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 SEMA3BQ13214 749 aa15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 DUOXA1Q1HG43 343 aa15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 PEAR1Q5VY43 1037 aaPredicted RBP15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 SLC36A4Q6YBV0 504 aa15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 PIP4P1Q86T03 277 aa15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 FAM35AQ86V20 835 aa15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 HDDC3Q8N4P3 179 aa15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 TERB1Q8NA31 727 aa15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 CEP76Q8TAP6 659 aa15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 SCFD1Q8WVM8 642 aa15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 NACA2Q9H009 215 aa15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 ZSCAN16Q9H4T2 348 aaPredicted RBP15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 SMYD3Q9H7B4 428 aa15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 DMAP1Q9NPF5 467 aaPredicted RBP15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 IL37Q9NZH6 218 aa15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 GMIPQ9P107 970 aa15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 CALCOCO1Q9P1Z2 691 aa15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 HCN2Q9UL51 889 aa15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 MTMR6Q9Y217 621 aa15.1■□□□□ 0.01
HLA-DQB2-229ENST00000411527 SRRM3A6NNA2 597 aaPredicted RBP15.09■□□□□ 0.01
HLA-DQB2-229ENST00000411527 SPTLC2O15270 562 aa15.09■□□□□ 0.01
HLA-DQB2-229ENST00000411527 ZBTB24O43167 697 aaPredicted RBP15.09■□□□□ 0.01
HLA-DQB2-229ENST00000411527 SERPINF2P08697 491 aa15.09■□□□□ 0.01
HLA-DQB2-229ENST00000411527 ZDHHC11BP0C7U3 371 aa15.09■□□□□ 0.01
HLA-DQB2-229ENST00000411527 NTSR1P30989 418 aa15.09■□□□□ 0.01
HLA-DQB2-229ENST00000411527 CASP4P49662 377 aa15.09■□□□□ 0.01
HLA-DQB2-229ENST00000411527 TUBP50607 506 aa15.09■□□□□ 0.01
HLA-DQB2-229ENST00000411527 ZNF33AQ06730 810 aa15.09■□□□□ 0.01
HLA-DQB2-229ENST00000411527 BIRC3Q13489 604 aa15.09■□□□□ 0.01
HLA-DQB2-229ENST00000411527 ZNF699Q32M78 642 aa15.09■□□□□ 0.01
HLA-DQB2-229ENST00000411527 ZNF667Q5HYK9 610 aa15.09■□□□□ 0.01
HLA-DQB2-229ENST00000411527 GRAMD4Q6IC98 578 aa15.09■□□□□ 0.01
HLA-DQB2-229ENST00000411527 MIB1Q86YT6 1006 aa15.09■□□□□ 0.01
HLA-DQB2-229ENST00000411527 IQUBQ8NA54 791 aa15.09■□□□□ 0.01
HLA-DQB2-229ENST00000411527 LINC00301Q8NCQ3 95 aa15.09■□□□□ 0.01
HLA-DQB2-229ENST00000411527 ZCCHC14Q8WYQ9 949 aaKnown RBP15.09■□□□□ 0.01
HLA-DQB2-229ENST00000411527 ELMO3Q96BJ8 720 aa15.09■□□□□ 0.01
HLA-DQB2-229ENST00000411527 SMARCD1Q96GM5 515 aa15.09■□□□□ 0.01
HLA-DQB2-229ENST00000411527 TNIP3Q96KP6 325 aa15.09■□□□□ 0.01
HLA-DQB2-229ENST00000411527 C7orf25Q9BPX7 421 aa15.09■□□□□ 0.01
HLA-DQB2-229ENST00000411527 COMMD8Q9NX08 183 aa15.09■□□□□ 0.01
HLA-DQB2-229ENST00000411527 TFIP11Q9UBB9 837 aaKnown RBP15.09■□□□□ 0.01
HLA-DQB2-229ENST00000411527 NEUROG3Q9Y4Z2 214 aa15.09■□□□□ 0.01
HLA-DQB2-229ENST00000411527 UBE4BO95155 1302 aa15.09■□□□□ 0.01
HLA-DQB2-229ENST00000411527 FAM208BQ5VWN6 2430 aa15.08■□□□□ 0.01
HLA-DQB2-229ENST00000411527 A0A1W2PQF6 199 aa15.08■□□□□ 0
HLA-DQB2-229ENST00000411527 FAM92AA1XBS5 289 aa15.08■□□□□ 0
HLA-DQB2-229ENST00000411527 UPK3BL1B0FP48 263 aa15.08■□□□□ 0
HLA-DQB2-229ENST00000411527 UPK3BL2E5RIL1 263 aa15.08■□□□□ 0
HLA-DQB2-229ENST00000411527 EXOC3O60645 756 aa15.08■□□□□ 0
HLA-DQB2-229ENST00000411527 OPHN1O60890 802 aa15.08■□□□□ 0
HLA-DQB2-229ENST00000411527 AP1G2O75843 785 aa15.08■□□□□ 0
HLA-DQB2-229ENST00000411527 CASP1P29466 404 aa15.08■□□□□ 0
HLA-DQB2-229ENST00000411527 PGFP49763 221 aa15.08■□□□□ 0
HLA-DQB2-229ENST00000411527 EGFLAMQ63HQ2 1017 aa15.08■□□□□ 0
HLA-DQB2-229ENST00000411527 SDE2Q6IQ49 451 aa15.08■□□□□ 0
HLA-DQB2-229ENST00000411527 CNNM4Q6P4Q7 775 aa15.08■□□□□ 0
HLA-DQB2-229ENST00000411527 SCARA5Q6ZMJ2 495 aa15.08■□□□□ 0
HLA-DQB2-229ENST00000411527 UNC13DQ70J99 1090 aa15.08■□□□□ 0
HLA-DQB2-229ENST00000411527 ACOT1Q86TX2 421 aa15.08■□□□□ 0
HLA-DQB2-229ENST00000411527 FUKQ8N0W3 1084 aa15.08■□□□□ 0
HLA-DQB2-229ENST00000411527 PLEKHO2Q8TD55 490 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms