RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 DPEP1P16444 411 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 ZFXP17010 805 aaPredicted RBP-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 ZNF16P17020 682 aaPredicted RBP-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 ZNF17P17021 662 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 PTPN1P18031 435 aaKnown RBP-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 NR1D1P20393 614 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 EPHA8P29322 1005 aaPredicted RBP-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 ID1P41134 155 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 LIMK2P53671 638 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 ANTXR2P58335 489 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 PPP3CAQ08209 521 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 SPIRE1Q08AE8 756 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 CCDC85BQ15834 202 aaPredicted RBP-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 ODF3L2Q3SX64 289 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 RABL6Q3YEC7 729 aaPredicted RBP-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 TM4SF20Q53R12 229 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 HERC4Q5GLZ8 1057 aaPredicted RBP-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 DCST1Q5T197 706 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 ASPHD1Q5U4P2 390 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 PPP4R3AQ6IN85 833 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 ANKRD16Q6P6B7 361 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 SASS6Q6UVJ0 657 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 GDPD4Q6W3E5 623 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 MAVSQ7Z434 540 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 SBSPONQ8IVN8 264 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 GID4Q8IVV7 300 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 SYT14Q8NB59 555 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 CMASQ8NFW8 434 aaPredicted RBP-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 CALML6Q8TD86 181 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 CNOT6LQ96LI5 555 aaKnown RBP-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 HS6ST2Q96MM7 605 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 RANBP9Q96S59 729 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 SLC9A7Q96T83 725 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 PINK1Q9BXM7 581 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 ANO3Q9BYT9 981 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 TRIM45Q9H8W5 580 aaPredicted RBP-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 MYNNQ9NPC7 610 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 TNFRSF19Q9NS68 423 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 ING3Q9NXR8 418 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 GABBR1Q9UBS5 961 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 BRPF3Q9ULD4 1205 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 PYGO1Q9Y3Y4 419 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 F8P00451 2351 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 TTBK1Q5TCY1 1321 aaPredicted RBP-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 ADGRA2Q96PE1 1338 aa-1.2□□□□□ -2.6
RNU4-88P-201ENST00000411220 SMARCA4P51532 1647 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 IGKV1D-8A0A087WSZ0 117 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 A0A0G2JNG1 304 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 BCLAF3A2AJT9 711 aaKnown RBP-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 FAM90A27PA6NNH2 459 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 P2RY10O00398 339 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 NPC1O15118 1278 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 NKRFO15226 690 aaKnown RBP eCLIP-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 MAGEB4O15481 346 aaPredicted RBP-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 STRNO43815 780 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 TGDSO95455 350 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 F13A1P00488 732 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 PRSS2P07478 247 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 CLEC2LP0C7M8 214 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 P0C880 135 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 PPP3CBP16298 524 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 CSRP1P21291 193 aaKnown RBP-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 ACVR2AP27037 513 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 CHRNA5P30532 468 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 MAP2K4P45985 399 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 HUNKP57058 714 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 CYP4F2P78329 520 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 ITIH3Q06033 890 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 AP5B1Q2VPB7 878 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 ZNF750Q32MQ0 723 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 TPRNQ4KMQ1 711 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 ATAT1Q5SQI0 421 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 FCRL6Q6DN72 434 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 PWWP2BQ6NUJ5 590 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 SWSAP1Q6NVH7 229 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 NAPRTQ6XQN6 538 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 ZNF534Q76KX8 674 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 MON1BQ7L1V2 547 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 BHLHA15Q7RTS1 189 aaPredicted RBP-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 REC114Q7Z4M0 266 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 ZSCAN2Q7Z7L9 614 aaPredicted RBP-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 CALHM3Q86XJ0 350 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 ARHGEF39Q8N4T4 335 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 MIGA1Q8NAN2 632 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 OR5AN1Q8NGI8 311 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 GAB3Q8WWW8 586 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 TMIGD2Q96BF3 282 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 LGALS12Q96DT0 336 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 MPP4Q96JB8 637 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 ASCL2Q99929 193 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 GDF15Q99988 308 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 ALG8Q9BVK2 526 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 TRIM7Q9C029 511 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 FAM86C1Q9NVL1 165 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 VSX1Q9NZR4 365 aaPredicted RBP-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 INSL5Q9Y5Q6 135 aa-1.21□□□□□ -2.6
RNU4-88P-201ENST00000411220 HUWE1Q7Z6Z7 4374 aaKnown RBP-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 IGKV2-29A2NJV5 120 aaPredicted RBP-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 SRRM5B3KS81 715 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 ARNTLO00327 626 aa-1.22□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms