RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 WBP2Q969T9 261 aa18.69■□□□□ 0.58
LSM5-204ENST00000409909 DNAI2Q9GZS0 605 aa18.69■□□□□ 0.58
LSM5-204ENST00000409909 NMUR1Q9HB89 426 aa18.69■□□□□ 0.58
LSM5-204ENST00000409909 TLR8Q9NR97 1041 aaKnown RBP18.69■□□□□ 0.58
LSM5-204ENST00000409909 KIAA1468Q9P260 1216 aa18.69■□□□□ 0.58
LSM5-204ENST00000409909 MYO16Q9Y6X6 1858 aa18.69■□□□□ 0.58
LSM5-204ENST00000409909 MYOFQ9NZM1 2061 aa18.69■□□□□ 0.58
LSM5-204ENST00000409909 TLR5O60602 858 aa18.68■□□□□ 0.58
LSM5-204ENST00000409909 CYP17A1P05093 508 aa18.68■□□□□ 0.58
LSM5-204ENST00000409909 DRD1P21728 446 aa18.68■□□□□ 0.58
LSM5-204ENST00000409909 OPRD1P41143 372 aa18.68■□□□□ 0.58
LSM5-204ENST00000409909 NRLP54845 237 aa18.68■□□□□ 0.58
LSM5-204ENST00000409909 PPP2R5DQ14738 602 aa18.68■□□□□ 0.58
LSM5-204ENST00000409909 DHCR24Q15392 516 aa18.68■□□□□ 0.58
LSM5-204ENST00000409909 ARHGAP17Q68EM7 881 aa18.68■□□□□ 0.58
LSM5-204ENST00000409909 DDX42Q86XP3 938 aaKnown RBP eCLIP18.68■□□□□ 0.58
LSM5-204ENST00000409909 LMO3Q8TAP4 145 aa18.68■□□□□ 0.58
LSM5-204ENST00000409909 CD101Q93033 1021 aa18.68■□□□□ 0.58
LSM5-204ENST00000409909 SRRTQ9BXP5 876 aaKnown RBP18.68■□□□□ 0.58
LSM5-204ENST00000409909 POLR3BQ9NW08 1133 aaPredicted RBP18.68■□□□□ 0.58
LSM5-204ENST00000409909 USP3Q9Y6I4 520 aa18.68■□□□□ 0.58
LSM5-204ENST00000409909 A0A1W2PQH9 124 aa18.67■□□□□ 0.58
LSM5-204ENST00000409909 E2F8A0AVK6 867 aa18.67■□□□□ 0.58
LSM5-204ENST00000409909 SLC9A3R1O14745 358 aaPredicted RBP18.67■□□□□ 0.58
LSM5-204ENST00000409909 RNF40O75150 1001 aa18.67■□□□□ 0.58
LSM5-204ENST00000409909 RHBDF2Q6PJF5 856 aa18.67■□□□□ 0.58
LSM5-204ENST00000409909 SCD5Q86SK9 330 aa18.67■□□□□ 0.58
LSM5-204ENST00000409909 TRIM59Q8IWR1 403 aa18.67■□□□□ 0.58
LSM5-204ENST00000409909 TRIML1Q8N9V2 468 aa18.67■□□□□ 0.58
LSM5-204ENST00000409909 MED15Q96RN5 788 aa18.67■□□□□ 0.58
LSM5-204ENST00000409909 EPC1Q9H2F5 836 aa18.67■□□□□ 0.58
LSM5-204ENST00000409909 CYLDQ9NQC7 956 aa18.67■□□□□ 0.58
LSM5-204ENST00000409909 DCHS1Q96JQ0 3298 aa18.66■□□□□ 0.58
LSM5-204ENST00000409909 CHURC1-FNTBB4DL54 471 aa18.66■□□□□ 0.58
LSM5-204ENST00000409909 FNTBP49356 437 aa18.66■□□□□ 0.58
LSM5-204ENST00000409909 MARSP56192 900 aaKnown RBP18.66■□□□□ 0.58
LSM5-204ENST00000409909 TTC30AQ86WT1 665 aa18.66■□□□□ 0.58
LSM5-204ENST00000409909 ANKRD52Q8NB46 1076 aa18.66■□□□□ 0.58
LSM5-204ENST00000409909 KLF16Q9BXK1 252 aaPredicted RBP18.66■□□□□ 0.58
LSM5-204ENST00000409909 UBXN6Q9BZV1 441 aa18.66■□□□□ 0.58
LSM5-204ENST00000409909 NACA2Q9H009 215 aa18.66■□□□□ 0.58
LSM5-204ENST00000409909 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.66■□□□□ 0.58
LSM5-204ENST00000409909 NUDT5Q9UKK9 219 aa18.66■□□□□ 0.58
LSM5-204ENST00000409909 ANTXRLA6NF34 631 aa18.65■□□□□ 0.58
LSM5-204ENST00000409909 TULP2O00295 520 aa18.65■□□□□ 0.58
LSM5-204ENST00000409909 GREM1O60565 184 aa18.65■□□□□ 0.58
LSM5-204ENST00000409909 IRF1P10914 325 aa18.65■□□□□ 0.58
LSM5-204ENST00000409909 TBXAS1P24557 533 aaPredicted RBP18.65■□□□□ 0.58
LSM5-204ENST00000409909 SLC6A11P48066 632 aa18.65■□□□□ 0.58
LSM5-204ENST00000409909 MESP2Q0VG99 397 aa18.65■□□□□ 0.58
LSM5-204ENST00000409909 KCNH2Q12809 1159 aa18.65■□□□□ 0.58
LSM5-204ENST00000409909 RAB41Q5JT25 222 aa18.65■□□□□ 0.58
LSM5-204ENST00000409909 HEATR6Q6AI08 1181 aaKnown RBP18.65■□□□□ 0.58
LSM5-204ENST00000409909 CCDC186Q7Z3E2 898 aa18.65■□□□□ 0.58
LSM5-204ENST00000409909 PIGZQ86VD9 579 aa18.65■□□□□ 0.58
LSM5-204ENST00000409909 BBS7Q8IWZ6 715 aa18.65■□□□□ 0.58
LSM5-204ENST00000409909 DCLK2Q8N568 766 aa18.65■□□□□ 0.58
LSM5-204ENST00000409909 KAT5Q92993 513 aa18.65■□□□□ 0.58
LSM5-204ENST00000409909 EXOC4Q96A65 974 aa18.65■□□□□ 0.58
LSM5-204ENST00000409909 NT5C1BQ96P26 610 aa18.65■□□□□ 0.58
LSM5-204ENST00000409909 TBC1D14Q9P2M4 693 aa18.65■□□□□ 0.58
LSM5-204ENST00000409909 SH3BP1Q9Y3L3 701 aa18.65■□□□□ 0.58
LSM5-204ENST00000409909 K7EQS6 105 aa18.64■□□□□ 0.57
LSM5-204ENST00000409909 RNF225M0QZC1 329 aaPredicted RBP18.64■□□□□ 0.57
LSM5-204ENST00000409909 MDM4O15151 490 aa18.64■□□□□ 0.57
LSM5-204ENST00000409909 P4HA2O15460 535 aa18.64■□□□□ 0.57
LSM5-204ENST00000409909 HRO43593 1189 aa18.64■□□□□ 0.57
LSM5-204ENST00000409909 ATG13O75143 517 aa18.64■□□□□ 0.57
LSM5-204ENST00000409909 GNA14O95837 355 aa18.64■□□□□ 0.57
LSM5-204ENST00000409909 RARGP13631 454 aa18.64■□□□□ 0.57
LSM5-204ENST00000409909 HOXA6P31267 233 aa18.64■□□□□ 0.57
LSM5-204ENST00000409909 ATP5C1P36542 298 aaKnown RBP18.64■□□□□ 0.57
LSM5-204ENST00000409909 ANP32AP39687 249 aaKnown RBP18.64■□□□□ 0.57
LSM5-204ENST00000409909 YWHAEP62258 255 aaKnown RBP18.64■□□□□ 0.57
LSM5-204ENST00000409909 GOLGA7BQ2TAP0 167 aa18.64■□□□□ 0.57
LSM5-204ENST00000409909 FBXO43Q4G163 708 aa18.64■□□□□ 0.57
LSM5-204ENST00000409909 SGO2Q562F6 1265 aa18.64■□□□□ 0.57
LSM5-204ENST00000409909 LY6G5CQ5SRR4 150 aa18.64■□□□□ 0.57
LSM5-204ENST00000409909 C12orf40Q86WS4 652 aa18.64■□□□□ 0.57
LSM5-204ENST00000409909 SFTPA1Q8IWL2 248 aa18.64■□□□□ 0.57
LSM5-204ENST00000409909 EHBP1Q8NDI1 1231 aa18.64■□□□□ 0.57
LSM5-204ENST00000409909 RPLP0P6Q8NHW5 317 aa18.64■□□□□ 0.57
LSM5-204ENST00000409909 RUBCNQ92622 972 aa18.64■□□□□ 0.57
LSM5-204ENST00000409909 RWDD2AQ9UIY3 292 aa18.64■□□□□ 0.57
LSM5-204ENST00000409909 NAGPAQ9UK23 515 aa18.64■□□□□ 0.57
LSM5-204ENST00000409909 TSPAN16Q9UKR8 245 aa18.64■□□□□ 0.57
LSM5-204ENST00000409909 KIAA1549LQ6ZVL6 1849 aa18.63■□□□□ 0.57
LSM5-204ENST00000409909 ADH1CP00326 375 aa18.63■□□□□ 0.57
LSM5-204ENST00000409909 CD19P15391 556 aa18.63■□□□□ 0.57
LSM5-204ENST00000409909 PDE4CQ08493 712 aa18.63■□□□□ 0.57
LSM5-204ENST00000409909 SRSF5Q13243 272 aaKnown RBP18.63■□□□□ 0.57
LSM5-204ENST00000409909 C10orf120Q5SQS8 335 aa18.63■□□□□ 0.57
LSM5-204ENST00000409909 KLHDC10Q6PID8 442 aa18.63■□□□□ 0.57
LSM5-204ENST00000409909 TMEM270Q6UE05 265 aa18.63■□□□□ 0.57
LSM5-204ENST00000409909 HTR3DQ70Z44 454 aa18.63■□□□□ 0.57
LSM5-204ENST00000409909 RRAGAQ7L523 313 aa18.63■□□□□ 0.57
LSM5-204ENST00000409909 LONP2Q86WA8 852 aa18.63■□□□□ 0.57
LSM5-204ENST00000409909 ARHGEF19Q8IW93 802 aa18.63■□□□□ 0.57
LSM5-204ENST00000409909 PPM1KQ8N3J5 372 aa18.63■□□□□ 0.57
LSM5-204ENST00000409909 TFAP2BQ92481 460 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms