RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 MAMDC4Q6UXC1 1216 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 CENPUQ71F23 418 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 ECHDC2Q86YB7 292 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 EXOC2Q96KP1 924 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 TTPALQ9BTX7 342 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 TLR10Q9BXR5 811 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 STMN4Q9H169 189 aaPredicted RBP11.86□□□□□ -0.51
SNX13-202ENST00000409604 CWC15Q9P013 229 aaKnown RBP11.86□□□□□ -0.51
SNX13-202ENST00000409604 SALL4Q9UJQ4 1053 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 FBXL5Q9UKA1 691 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 REXO2Q9Y3B8 237 aaKnown RBP11.86□□□□□ -0.51
SNX13-202ENST00000409604 SNX10Q9Y5X0 201 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 MYH7P12883 1935 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 CHRNA1P02708 482 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 MAPK8IP2Q13387 824 aaPredicted RBP11.86□□□□□ -0.51
SNX13-202ENST00000409604 USP41Q3LFD5 358 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 RAPGEF5Q92565 580 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 PCED1BQ96HM7 432 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 MARCH2Q9P0N8 246 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 AFF4Q9UHB7 1163 aaKnown RBP11.86□□□□□ -0.51
SNX13-202ENST00000409604 VPS28Q9UK41 221 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 GJD2Q9UKL4 321 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 DSEQ9UL01 958 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 SLC8A2Q9UPR5 921 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 PLAAQ9Y263 795 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 UNCXA6NJT0 531 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 C9IYK1 514 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 NRP1O14786 923 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 CCL16O15467 120 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 ATG7O95352 703 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 TPH1P17752 444 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 SLC1A1P43005 524 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 EPHB4P54760 987 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 FUT10Q6P4F1 479 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 FAM35AQ86V20 835 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 AGR3Q8TD06 166 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 VPS11Q9H270 941 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 DMAC2Q9NW81 257 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 DDX56Q9NY93 547 aaKnown RBP11.86□□□□□ -0.51
SNX13-202ENST00000409604 MPP6Q9NZW5 540 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 RNF14Q9UBS8 474 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 ADAM28Q9UKQ2 775 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 COL1A2P08123 1366 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 ZMYM2Q9UBW7 1377 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 BUD23O43709 281 aaKnown RBP11.85□□□□□ -0.51
SNX13-202ENST00000409604 EDN1P05305 212 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 VCPP55072 806 aaKnown RBP11.85□□□□□ -0.51
SNX13-202ENST00000409604 TAP1Q03518 808 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 POU5F1BQ06416 359 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 TAF10Q12962 218 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 LRRC14Q15048 493 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 CNGA2Q16280 664 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 LGSNQ5TDP6 509 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 RAP1GAP2Q684P5 730 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 DCLRE1AQ6PJP8 1040 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 TAS2R42Q7RTR8 314 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 JAMLQ86YT9 394 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 TTC13Q8NBP0 860 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 ATL2Q8NHH9 583 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 PPP4R1Q8TF05 950 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 KIAA1257Q9ULG3 409 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 TRUB2O95900 331 aaKnown RBP11.85□□□□□ -0.51
SNX13-202ENST00000409604 TUBP50607 506 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 TBX4P57082 545 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 BOLA3Q53S33 107 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 VARS2Q5ST30 1063 aaKnown RBP11.85□□□□□ -0.51
SNX13-202ENST00000409604 SH3PXD2AQ5TCZ1 1133 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 NYAP1Q6ZVC0 841 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 ARFGAP2Q8N6H7 521 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 PXYLP1Q8TE99 480 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 CDKL2Q92772 493 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 BADQ92934 168 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 SNX27Q96L92 541 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 MIOSQ9NXC5 875 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 RASGRF2O14827 1237 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 TADA3O75528 432 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 RARAP10276 462 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 ETS1P14921 441 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 NOMO3P69849 1222 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 SLC6A3Q01959 620 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 MAMLD1Q13495 774 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 BZW1Q7L1Q6 419 aaKnown RBP11.85□□□□□ -0.51
SNX13-202ENST00000409604 USP38Q8NB14 1042 aa11.85□□□□□ -0.51
SNX13-202ENST00000409604 UNKQ9C0B0 810 aaKnown RBP11.85□□□□□ -0.51
SNX13-202ENST00000409604 GNEQ9Y223 722 aaKnown RBP11.85□□□□□ -0.51
SNX13-202ENST00000409604 ERBB2P04626 1255 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 GSTA1P08263 222 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 GSTA2P09210 222 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 GABRR2P28476 465 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 CHRNA3P32297 505 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 ARHGAP25P42331 645 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 SCNN1BP51168 640 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 PRAMEP78395 509 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 SOX4Q06945 474 aaPredicted RBP11.84□□□□□ -0.51
SNX13-202ENST00000409604 MTMR3Q13615 1198 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 SLC12A1Q13621 1099 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 CBX2Q14781 532 aaPredicted RBP11.84□□□□□ -0.51
SNX13-202ENST00000409604 SOWAHAQ2M3V2 549 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.84□□□□□ -0.51
SNX13-202ENST00000409604 DENND1CQ8IV53 801 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms