RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 DPEP3Q9H4B8 488 aa17.97■□□□□ 0.47
SCRN1-203ENST00000409570 DNAAF2Q9NVR5 837 aaKnown RBP17.97■□□□□ 0.47
SCRN1-203ENST00000409570 DEC1Q9P2X7 70 aa17.97■□□□□ 0.47
SCRN1-203ENST00000409570 FBXO2Q9UK22 296 aaPredicted RBP17.97■□□□□ 0.47
SCRN1-203ENST00000409570 CLIC4Q9Y696 253 aa17.97■□□□□ 0.47
SCRN1-203ENST00000409570 CELSR3Q9NYQ7 3312 aa17.97■□□□□ 0.47
SCRN1-203ENST00000409570 GOLGA4Q13439 2230 aaKnown RBP17.96■□□□□ 0.47
SCRN1-203ENST00000409570 A0A1W2PQF6 199 aa17.96■□□□□ 0.47
SCRN1-203ENST00000409570 CLDN5O00501 218 aa17.96■□□□□ 0.47
SCRN1-203ENST00000409570 TRIM24O15164 1050 aa17.96■□□□□ 0.47
SCRN1-203ENST00000409570 CST3P01034 146 aaPredicted RBP17.96■□□□□ 0.47
SCRN1-203ENST00000409570 YWHAQP27348 245 aa17.96■□□□□ 0.47
SCRN1-203ENST00000409570 WASP42768 502 aa17.96■□□□□ 0.47
SCRN1-203ENST00000409570 HNRNPDQ14103 355 aaKnown RBP17.96■□□□□ 0.47
SCRN1-203ENST00000409570 BTBD8Q5XKL5 378 aa17.96■□□□□ 0.47
SCRN1-203ENST00000409570 TRAPPC11Q7Z392 1133 aa17.96■□□□□ 0.47
SCRN1-203ENST00000409570 WDR49Q8IV35 697 aa17.96■□□□□ 0.47
SCRN1-203ENST00000409570 BBS7Q8IWZ6 715 aa17.96■□□□□ 0.47
SCRN1-203ENST00000409570 NUP93Q8N1F7 819 aa17.96■□□□□ 0.47
SCRN1-203ENST00000409570 OR6B3Q8NGW1 331 aa17.96■□□□□ 0.47
SCRN1-203ENST00000409570 FBXO32Q969P5 355 aa17.96■□□□□ 0.47
SCRN1-203ENST00000409570 WBP2Q969T9 261 aa17.96■□□□□ 0.47
SCRN1-203ENST00000409570 CAMK1GQ96NX5 476 aa17.96■□□□□ 0.47
SCRN1-203ENST00000409570 B3GNT5Q9BYG0 378 aa17.96■□□□□ 0.47
SCRN1-203ENST00000409570 ELOVL4Q9GZR5 314 aa17.96■□□□□ 0.47
SCRN1-203ENST00000409570 CD248Q9HCU0 757 aa17.96■□□□□ 0.47
SCRN1-203ENST00000409570 PANK4Q9NVE7 773 aa17.96■□□□□ 0.47
SCRN1-203ENST00000409570 SMC3Q9UQE7 1217 aa17.96■□□□□ 0.47
SCRN1-203ENST00000409570 CABIN1Q9Y6J0 2220 aa17.96■□□□□ 0.47
SCRN1-203ENST00000409570 SMG1Q96Q15 3661 aaKnown RBP17.96■□□□□ 0.47
SCRN1-203ENST00000409570 GJB3O75712 270 aa17.95■□□□□ 0.46
SCRN1-203ENST00000409570 SYPP08247 313 aa17.95■□□□□ 0.46
SCRN1-203ENST00000409570 FAM163BP0C2L3 166 aa17.95■□□□□ 0.46
SCRN1-203ENST00000409570 NTSR1P30989 418 aa17.95■□□□□ 0.46
SCRN1-203ENST00000409570 SCAPQ12770 1279 aa17.95■□□□□ 0.46
SCRN1-203ENST00000409570 PREPLQ4J6C6 727 aaPredicted RBP17.95■□□□□ 0.46
SCRN1-203ENST00000409570 C10orf76Q5T2E6 689 aa17.95■□□□□ 0.46
SCRN1-203ENST00000409570 TMEM25Q86YD3 366 aa17.95■□□□□ 0.46
SCRN1-203ENST00000409570 TRIML1Q8N9V2 468 aa17.95■□□□□ 0.46
SCRN1-203ENST00000409570 GLIS3Q8NEA6 775 aa17.95■□□□□ 0.46
SCRN1-203ENST00000409570 PDZD8Q8NEN9 1154 aa17.95■□□□□ 0.46
SCRN1-203ENST00000409570 OVCA2Q8WZ82 227 aa17.95■□□□□ 0.46
SCRN1-203ENST00000409570 HSPA12BQ96MM6 686 aa17.95■□□□□ 0.46
SCRN1-203ENST00000409570 CLIC6Q96NY7 704 aa17.95■□□□□ 0.46
SCRN1-203ENST00000409570 DUSP9Q99956 384 aaKnown RBP17.95■□□□□ 0.46
SCRN1-203ENST00000409570 SPHK2Q9NRA0 654 aa17.95■□□□□ 0.46
SCRN1-203ENST00000409570 CHORDC1Q9UHD1 332 aaPredicted RBP17.95■□□□□ 0.46
SCRN1-203ENST00000409570 SH3BP1Q9Y3L3 701 aa17.95■□□□□ 0.46
SCRN1-203ENST00000409570 STARD13Q9Y3M8 1113 aa17.95■□□□□ 0.46
SCRN1-203ENST00000409570 GPSM3Q9Y4H4 160 aa17.95■□□□□ 0.46
SCRN1-203ENST00000409570 SRPRBQ9Y5M8 271 aaKnown RBP17.95■□□□□ 0.46
SCRN1-203ENST00000409570 A0A1W2PQD8 194 aa17.94■□□□□ 0.46
SCRN1-203ENST00000409570 SH3BP5O60239 455 aa17.94■□□□□ 0.46
SCRN1-203ENST00000409570 RTN3O95197 1032 aaPredicted RBP17.94■□□□□ 0.46
SCRN1-203ENST00000409570 NDUFV2P19404 249 aa17.94■□□□□ 0.46
SCRN1-203ENST00000409570 TRIP6Q15654 476 aaKnown RBP17.94■□□□□ 0.46
SCRN1-203ENST00000409570 ANO4Q32M45 955 aa17.94■□□□□ 0.46
SCRN1-203ENST00000409570 HECTD3Q5T447 861 aa17.94■□□□□ 0.46
SCRN1-203ENST00000409570 SNX30Q5VWJ9 437 aa17.94■□□□□ 0.46
SCRN1-203ENST00000409570 EGFLAMQ63HQ2 1017 aa17.94■□□□□ 0.46
SCRN1-203ENST00000409570 SCAMP5Q8TAC9 235 aa17.94■□□□□ 0.46
SCRN1-203ENST00000409570 IPO4Q8TEX9 1081 aaKnown RBP17.94■□□□□ 0.46
SCRN1-203ENST00000409570 ACOX2Q99424 681 aa17.94■□□□□ 0.46
SCRN1-203ENST00000409570 CCSER2Q9H7U1 834 aa17.94■□□□□ 0.46
SCRN1-203ENST00000409570 CD93Q9NPY3 652 aa17.94■□□□□ 0.46
SCRN1-203ENST00000409570 HSPBP1Q9NZL4 362 aa17.94■□□□□ 0.46
SCRN1-203ENST00000409570 CYP8B1Q9UNU6 501 aa17.94■□□□□ 0.46
SCRN1-203ENST00000409570 GCN1Q92616 2671 aaKnown RBP17.94■□□□□ 0.46
SCRN1-203ENST00000409570 URB1O60287 2271 aaKnown RBP17.93■□□□□ 0.46
SCRN1-203ENST00000409570 A0A087X0B3 334 aa17.93■□□□□ 0.46
SCRN1-203ENST00000409570 ZNF217O75362 1048 aa17.93■□□□□ 0.46
SCRN1-203ENST00000409570 HOXD13P35453 343 aa17.93■□□□□ 0.46
SCRN1-203ENST00000409570 SLC14A1Q13336 389 aa17.93■□□□□ 0.46
SCRN1-203ENST00000409570 C19orf48Q6RUI8 117 aa17.93■□□□□ 0.46
SCRN1-203ENST00000409570 NUDT18Q6ZVK8 323 aa17.93■□□□□ 0.46
SCRN1-203ENST00000409570 B3GALNT2Q8NCR0 500 aa17.93■□□□□ 0.46
SCRN1-203ENST00000409570 ADAMTS14Q8WXS8 1223 aa17.93■□□□□ 0.46
SCRN1-203ENST00000409570 ERLEC1Q96DZ1 483 aa17.93■□□□□ 0.46
SCRN1-203ENST00000409570 ZNF419Q96HQ0 510 aaPredicted RBP17.93■□□□□ 0.46
SCRN1-203ENST00000409570 KCNK16Q96T55 309 aa17.93■□□□□ 0.46
SCRN1-203ENST00000409570 IL37Q9NZH6 218 aa17.93■□□□□ 0.46
SCRN1-203ENST00000409570 ASXL3Q9C0F0 2248 aa17.92■□□□□ 0.46
SCRN1-203ENST00000409570 ZDHHC11BP0C7U3 371 aa17.92■□□□□ 0.46
SCRN1-203ENST00000409570 FTH1P19P0C7X4 201 aa17.92■□□□□ 0.46
SCRN1-203ENST00000409570 TXLNAP40222 546 aa17.92■□□□□ 0.46
SCRN1-203ENST00000409570 TUBP50607 506 aa17.92■□□□□ 0.46
SCRN1-203ENST00000409570 TNNC1P63316 161 aa17.92■□□□□ 0.46
SCRN1-203ENST00000409570 PLEKHG6Q3KR16 790 aa17.92■□□□□ 0.46
SCRN1-203ENST00000409570 WDR72Q3MJ13 1102 aa17.92■□□□□ 0.46
SCRN1-203ENST00000409570 GRAMD4Q6IC98 578 aa17.92■□□□□ 0.46
SCRN1-203ENST00000409570 CCDC73Q6ZRK6 1079 aa17.92■□□□□ 0.46
SCRN1-203ENST00000409570 PNPLA1Q8N8W4 532 aa17.92■□□□□ 0.46
SCRN1-203ENST00000409570 HPS3Q969F9 1004 aa17.92■□□□□ 0.46
SCRN1-203ENST00000409570 GABRG3Q99928 467 aa17.92■□□□□ 0.46
SCRN1-203ENST00000409570 PANK2Q9BZ23 570 aa17.92■□□□□ 0.46
SCRN1-203ENST00000409570 GMIPQ9P107 970 aa17.92■□□□□ 0.46
SCRN1-203ENST00000409570 A8MXQ7 604 aa17.91■□□□□ 0.46
SCRN1-203ENST00000409570 DLATP10515 647 aaKnown RBP17.91■□□□□ 0.46
SCRN1-203ENST00000409570 IRF1P10914 325 aa17.91■□□□□ 0.46
SCRN1-203ENST00000409570 TNNI1P19237 187 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms