RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 LRRC45Q96CN5 670 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 CDCA5Q96FF9 252 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 TEKT5Q96M29 485 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 ZNF570Q96NI8 536 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 ZIM3Q96PE6 472 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 TSPAN18Q96SJ8 248 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 MMS19Q96T76 1030 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 FTOQ9C0B1 505 aaKnown RBP eCLIP5.83□□□□□ -1.48
CLK1-202ENST00000409403 FAM192AQ9GZU8 254 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 UBA5Q9GZZ9 404 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 OR10A5Q9H207 317 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 RABEP2Q9H5N1 569 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 ZWILCHQ9H900 591 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 ARHGAP20Q9P2F6 1191 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 CIDEBQ9UHD4 219 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 NARFQ9UHQ1 456 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 TSPYL4Q9UJ04 414 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 GUCA1BQ9UMX6 200 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 SLC12A4Q9UP95 1085 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 GPR45Q9Y5Y3 372 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 C5orf42Q9H799 3197 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 GPR75-ASB3A0A0A6YYF3 556 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 TEX51A0A1B0GUA7 166 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 DNM1LO00429 736 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 ASAP2O43150 1006 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 USO1O60763 962 aaKnown RBP5.82□□□□□ -1.48
CLK1-202ENST00000409403 LPLP06858 475 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 LINGO3P0C6S8 592 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 PF4V1P10720 104 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 IDEP14735 1019 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 ATF2P15336 505 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 AGXTP21549 392 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 APEX1P27695 318 aaKnown RBP5.82□□□□□ -1.48
CLK1-202ENST00000409403 PSMD7P51665 324 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 SREBF2Q12772 1141 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 ITGB3BPQ13352 177 aaPredicted RBP5.82□□□□□ -1.48
CLK1-202ENST00000409403 PNOCQ13519 176 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 SNX1Q13596 522 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 MORC3Q14149 939 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 POSTNQ15063 836 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 TAF11Q15544 211 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 DDX60LQ5H9U9 1706 aaKnown RBP5.82□□□□□ -1.48
CLK1-202ENST00000409403 CCDC122Q5T0U0 273 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 TBC1D9BQ66K14 1250 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 C8orf74Q6P047 294 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 PRR23BQ6ZRT6 265 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 USP34Q70CQ2 3546 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 KCNK18Q7Z418 384 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 CROCCP2Q86T23 111 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 MYLK4Q86YV6 388 aaPredicted RBP5.82□□□□□ -1.48
CLK1-202ENST00000409403 IQCKQ8N0W5 287 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 ACRBPQ8NEB7 543 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 SMCR8Q8TEV9 937 aaPredicted RBP5.82□□□□□ -1.48
CLK1-202ENST00000409403 MAIP1Q8WWC4 291 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 RSAD2Q8WXG1 361 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 JADE3Q92613 823 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 ARL8AQ96BM9 186 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 CCDC43Q96MW1 224 aaKnown RBP5.82□□□□□ -1.48
CLK1-202ENST00000409403 RAB3IPQ96QF0 476 aaPredicted RBP5.82□□□□□ -1.48
CLK1-202ENST00000409403 NUP88Q99567 741 aaPredicted RBP5.82□□□□□ -1.48
CLK1-202ENST00000409403 LZTS2Q9BRK4 669 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 TTYH1Q9H313 450 aaPredicted RBP5.82□□□□□ -1.48
CLK1-202ENST00000409403 MMADHCQ9H3L0 296 aaPredicted RBP5.82□□□□□ -1.48
CLK1-202ENST00000409403 NDST4Q9H3R1 872 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 DMAP1Q9NPF5 467 aaPredicted RBP5.82□□□□□ -1.48
CLK1-202ENST00000409403 PLCB1Q9NQ66 1216 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.82□□□□□ -1.485e-6■□□□□ 10.5
CLK1-202ENST00000409403 WDR35Q9P2L0 1181 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 ADD3Q9UEY8 706 aaKnown RBP5.82□□□□□ -1.48
CLK1-202ENST00000409403 MAN1B1Q9UKM7 699 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 TMPRSS11EQ9UL52 423 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 DENND2AQ9ULE3 1009 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 PNMA8BQ9ULN7 279 aaPredicted RBP5.82□□□□□ -1.48
CLK1-202ENST00000409403 SYNRGQ9UMZ2 1314 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 WDR37Q9Y2I8 494 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 HYOU1Q9Y4L1 999 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 ASB3Q9Y575 518 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.82□□□□□ -1.48
CLK1-202ENST00000409403 CLIC4Q9Y696 253 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 EPN1Q9Y6I3 576 aaPredicted RBP5.82□□□□□ -1.48
CLK1-202ENST00000409403 SLC4A7Q9Y6M7 1214 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 RIC1Q4ADV7 1423 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 MROH7-TTC4A0A0A0MT08 1334 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 MYPNQ86TC9 1320 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 UBE2Q2LH0YL09 131 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 N4BP3O15049 544 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 ORC4O43929 436 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 DIAPH2O60879 1101 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 TAF5LO75529 589 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 BAG3O95817 575 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 ATP1A1P05023 1023 aaKnown RBP5.82□□□□□ -1.48
CLK1-202ENST00000409403 PFKMP08237 780 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 OSMP13725 252 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 SLC5A3P53794 718 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 ITGA1P56199 1179 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 CXCL9Q07325 125 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 KLC1Q07866 573 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 CCDC152Q4G0S7 254 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 CCDC178Q5BJE1 867 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 TTC39AQ5SRH9 613 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms