RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 APOC4-APOC2K7ER74 178 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 SMAPO00193 183 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 PIK3R2O00459 728 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 MDM4O15151 490 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 INPPL1O15357 1258 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 FKTNO75072 461 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 GRAP2O75791 330 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 B3GAT3O94766 335 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 FBXO21O94952 628 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 APOC2P02655 101 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 FAM200BP0CF97 657 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 CKBP12277 381 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 LCP1P13796 627 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 NPR3P17342 541 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 LMAN1P49257 510 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 SCNN1GP51170 649 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 ITGA8P53708 1063 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 CDH6P55285 790 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 YWHAZP63104 245 aaKnown RBP6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 ATP11AP98196 1134 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 ZNF844Q08AG5 666 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 GRIK3Q13003 919 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 TUSC3Q13454 348 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 KRT81Q14533 505 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 SLC29A2Q14542 456 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 TAF5Q15542 800 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 TRIP13Q15645 432 aaPredicted RBP6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 C15orf59Q2T9L4 293 aaPredicted RBP6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 SMTNL2Q2TAL5 461 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 TJAP1Q5JTD0 557 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 ERMARDQ5T6L9 678 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 RHBDF2Q6PJF5 856 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 DCLRE1AQ6PJP8 1040 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 TRIM67Q6ZTA4 783 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 ZNF771Q7L3S4 317 aaPredicted RBP6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 STRADAQ7RTN6 431 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 PIGZQ86VD9 579 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 HOOK3Q86VS8 718 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 OSTM1Q86WC4 334 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 ECHDC2Q86YB7 292 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 RFX6Q8HWS3 928 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 RELL1Q8IUW5 271 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 FUKQ8N0W3 1084 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 ARFGAP2Q8N6H7 521 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 RNF169Q8NCN4 708 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 ACTL9Q8TC94 416 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 FAM172AQ8WUF8 416 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 RSAD2Q8WXG1 361 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 HSPH1Q92598 858 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 LPPQ93052 612 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 CFAP57Q96MR6 1250 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 RNF157Q96PX1 679 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 LPIN3Q9BQK8 851 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 ACBD6Q9BR61 282 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 MED10Q9BTT4 135 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 CALN1Q9BXU9 219 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 B3GNT5Q9BYG0 378 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 ROPN1BQ9BZX4 212 aaPredicted RBP6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 SEMA4AQ9H3S1 761 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 ROPN1Q9HAT0 212 aaPredicted RBP6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 PCDH9Q9HC56 1237 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 NGRNQ9NPE2 291 aaKnown RBP6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 RGS18Q9NS28 235 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 DDX43Q9NXZ2 648 aaKnown RBP6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 KANSL3Q9P2N6 904 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 TPX2Q9ULW0 747 aaKnown RBP6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 PTCH2Q9Y6C5 1203 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 SCN10AQ9Y5Y9 1956 aa6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 SGK1O00141 431 aa6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 MCF2LO15068 1137 aa6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 TP73O15350 636 aa6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 RIPK2O43353 540 aa6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 HCRTO43612 131 aa6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 MGEA5O60502 916 aa6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 ATP2C2O75185 946 aa6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 CYP11A1P05108 521 aa6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 ODC1P11926 461 aa6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 COL6A1P12109 1028 aa6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 ZFXP17010 805 aaPredicted RBP6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 CAPN2P17655 700 aa6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 GRK4P32298 578 aa6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 NOS2P35228 1153 aa6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 MATKP42679 507 aa6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 ARSEP51690 589 aa6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 AFF1P51825 1210 aaKnown RBP6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 FAM189BP81408 668 aa6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 MRPS5P82675 430 aaKnown RBP6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 SKOR1P84550 965 aa6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 OTUD4Q01804 1114 aaKnown RBP6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 DMTNQ08495 405 aa6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 MORF4L2Q15014 288 aa6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 MAPRE1Q15691 268 aaKnown RBP6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 CDO1Q16878 200 aa6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 SLC25A52Q3SY17 297 aa6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 KRT71Q3SY84 523 aa6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 TIGD5Q53EQ6 642 aa6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 TTMPQ5BVD1 217 aa6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 SH3PXD2AQ5TCZ1 1133 aa6.54□□□□□ -1.36
GTF3C3-202ENST00000409364 IZUMO3Q5VZ72 239 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms