RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 TRIM72Q6ZMU5 477 aa17.03■□□□□ 0.32
CDK11B-204ENST00000407249 FEZF2Q8TBJ5 459 aa17.03■□□□□ 0.32
CDK11B-204ENST00000407249 PTCD3Q96EY7 689 aaKnown RBP17.03■□□□□ 0.32
CDK11B-204ENST00000407249 FAM213AQ9BRX8 229 aa17.03■□□□□ 0.32
CDK11B-204ENST00000407249 AASDHPPTQ9NRN7 309 aa17.03■□□□□ 0.32
CDK11B-204ENST00000407249 KIAA1522Q9P206 1035 aaPredicted RBP17.03■□□□□ 0.32
CDK11B-204ENST00000407249 FETUBQ9UGM5 382 aa17.03■□□□□ 0.32
CDK11B-204ENST00000407249 RABGEF1Q9UJ41 708 aa17.03■□□□□ 0.32
CDK11B-204ENST00000407249 KIAA1217Q5T5P2 1943 aa17.03■□□□□ 0.32
CDK11B-204ENST00000407249 WDR91A4D1P6 747 aa17.02■□□□□ 0.32
CDK11B-204ENST00000407249 CXCL11O14625 94 aa17.02■□□□□ 0.32
CDK11B-204ENST00000407249 BIRC5O15392 142 aa17.02■□□□□ 0.32
CDK11B-204ENST00000407249 BANF1O75531 89 aa17.02■□□□□ 0.32
CDK11B-204ENST00000407249 GSTT1P30711 240 aa17.02■□□□□ 0.32
CDK11B-204ENST00000407249 WDR44Q5JSH3 913 aa17.02■□□□□ 0.32
CDK11B-204ENST00000407249 ANKMY2Q8IV38 441 aa17.02■□□□□ 0.32
CDK11B-204ENST00000407249 UPF1Q92900 1129 aaKnown RBP eCLIP17.02■□□□□ 0.32
CDK11B-204ENST00000407249 VCXQ9H320 206 aa17.02■□□□□ 0.32
CDK11B-204ENST00000407249 PDLIM7Q9NR12 457 aa17.02■□□□□ 0.32
CDK11B-204ENST00000407249 CLUHO75153 1309 aa17.02■□□□□ 0.32
CDK11B-204ENST00000407249 A0A0G2JLL6 359 aaPredicted RBP17.02■□□□□ 0.31
CDK11B-204ENST00000407249 HNRNPDLO14979 420 aaKnown RBP17.02■□□□□ 0.31
CDK11B-204ENST00000407249 ZNF862O60290 1169 aa17.02■□□□□ 0.31
CDK11B-204ENST00000407249 DDNO94850 711 aaPredicted RBP17.02■□□□□ 0.31
CDK11B-204ENST00000407249 VCPP55072 806 aaKnown RBP17.02■□□□□ 0.31
CDK11B-204ENST00000407249 RPL7AP62424 266 aaKnown RBP17.02■□□□□ 0.31
CDK11B-204ENST00000407249 MCL1Q07820 350 aa17.02■□□□□ 0.31
CDK11B-204ENST00000407249 WDR81Q562E7 1941 aa17.02■□□□□ 0.31
CDK11B-204ENST00000407249 BRDTQ58F21 947 aaPredicted RBP17.02■□□□□ 0.31
CDK11B-204ENST00000407249 SNX30Q5VWJ9 437 aa17.02■□□□□ 0.31
CDK11B-204ENST00000407249 LMBRD2Q68DH5 695 aaPredicted RBP17.02■□□□□ 0.31
CDK11B-204ENST00000407249 SWSAP1Q6NVH7 229 aa17.02■□□□□ 0.31
CDK11B-204ENST00000407249 PRRT2Q7Z6L0 340 aaPredicted RBP17.02■□□□□ 0.31
CDK11B-204ENST00000407249 TCP10LQ8TDR4 215 aa17.02■□□□□ 0.31
CDK11B-204ENST00000407249 NCSTNQ92542 709 aa17.02■□□□□ 0.31
CDK11B-204ENST00000407249 VPS11Q9H270 941 aa17.02■□□□□ 0.31
CDK11B-204ENST00000407249 PARVAQ9NVD7 372 aa17.02■□□□□ 0.31
CDK11B-204ENST00000407249 ARL8BQ9NVJ2 186 aa17.02■□□□□ 0.31
CDK11B-204ENST00000407249 IP6K2Q9UHH9 426 aa17.02■□□□□ 0.31
CDK11B-204ENST00000407249 GSC2O15499 205 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 ATG7O95352 703 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 KRT1P04264 644 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 SSTR3P32745 418 aaPredicted RBP17.01■□□□□ 0.31
CDK11B-204ENST00000407249 CLDN10P78369 228 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 PRKCEQ02156 737 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 C1QBPQ07021 282 aaKnown RBP17.01■□□□□ 0.31
CDK11B-204ENST00000407249 TFDP1Q14186 410 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 EFTUD2Q15029 972 aaKnown RBP eCLIP17.01■□□□□ 0.312e-6■■■■□ 23.1
CDK11B-204ENST00000407249 HIF1AQ16665 826 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 ZACNQ401N2 412 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 CCDC153Q494R4 210 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 OR52E8Q6IFG1 317 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 SPOPLQ6IQ16 392 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 IRGCQ6NXR0 463 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 ADGRD1Q6QNK2 874 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 ESX1Q8N693 406 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 MZB1Q8WU39 189 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 NKD2Q969F2 451 aaPredicted RBP17.01■□□□□ 0.31
CDK11B-204ENST00000407249 TMEM121Q9BTD3 319 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 DHRS4Q9BTZ2 278 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 TUBB6Q9BUF5 446 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 PCDH9Q9HC56 1237 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 HEY2Q9UBP5 337 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 IVNS1ABPQ9Y6Y0 642 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 A0A0G2JND7 137 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 GOLGA8SH3BPF8 625 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 GOLGA8MH3BSY2 632 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 TM9SF1O15321 606 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 HAUS5O94927 633 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 ITGAVP06756 1048 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 GSTA2P09210 222 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 GARTP22102 1010 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 GLRA2P23416 452 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 PIK3CAP42336 1068 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 TUBA1BP68363 451 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 OCRLQ01968 901 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 PRKG1Q13976 671 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 SEPT7Q16181 437 aaKnown RBP17.01■□□□□ 0.31
CDK11B-204ENST00000407249 CCDC6Q16204 474 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 ACSBG2Q5FVE4 666 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 GRAMD4Q6IC98 578 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 TUBA1AQ71U36 451 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 ERO1BQ86YB8 467 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 NRG4Q8WWG1 115 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 AZIN2Q96A70 460 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 TRIM55Q9BYV6 548 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 MANSC1Q9H8J5 431 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 CYP26B1Q9NR63 512 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 RNF181Q9P0P0 153 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 CHMP2BQ9UQN3 213 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 LRCH1Q9Y2L9 728 aa17.01■□□□□ 0.31
CDK11B-204ENST00000407249 FARP1Q9Y4F1 1045 aaPredicted RBP17.01■□□□□ 0.31
CDK11B-204ENST00000407249 IFNB1P01574 187 aa17■□□□□ 0.31
CDK11B-204ENST00000407249 HLA-DRAP01903 254 aa17■□□□□ 0.31
CDK11B-204ENST00000407249 GNA15P30679 374 aa17■□□□□ 0.31
CDK11B-204ENST00000407249 SSTR1P30872 391 aa17■□□□□ 0.31
CDK11B-204ENST00000407249 SH3BGRP55822 239 aaPredicted RBP17■□□□□ 0.31
CDK11B-204ENST00000407249 SOX10P56693 466 aa17■□□□□ 0.31
CDK11B-204ENST00000407249 TREML2Q5T2D2 321 aa17■□□□□ 0.31
CDK11B-204ENST00000407249 DUS1LQ6P1R4 473 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms