RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 IFT80Q9P2H3 777 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 STEAP1Q9UHE8 339 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 JAG2Q9Y219 1238 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 SYNJ1O43426 1573 aa5.4□□□□□ -1.55
HMGB3P18-201ENST00000406327 COL15A1P39059 1388 aa5.4□□□□□ -1.55
HMGB3P18-201ENST00000406327 CFTRP13569 1480 aa5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 GOLGA3Q08378 1498 aa5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 RNASET2O00584 256 aaKnown RBP5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 TSPAN3O60637 253 aa5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 SCAF4O95104 1147 aaKnown RBP5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 TFRCP02786 760 aaKnown RBP5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 CENPBP07199 599 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 CSF1RP07333 972 aa5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 HGFP14210 728 aa5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 HIBADHP31937 336 aaKnown RBP5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 PRKAA2P54646 552 aa5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 EIF5P55010 431 aaKnown RBP5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 MPP1Q00013 466 aa5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 MAPK7Q13164 816 aa5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 SLC12A1Q13621 1099 aa5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 ST3GAL2Q16842 350 aa5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 PTCHD3Q3KNS1 767 aa5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 TBRG1Q3YBR2 411 aa5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 TBC1D10BQ4KMP7 808 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 UBXN11Q5T124 520 aa5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 MAP3K21Q5TCX8 1036 aa5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 MAMDC4Q6UXC1 1216 aa5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 DSTYKQ6XUX3 929 aa5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 ABRAQ8N0Z2 381 aa5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 TMEM132CQ8N3T6 1108 aa5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 FAM109AQ8N4B1 249 aa5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 ZNF808Q8N4W9 903 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 Q8NA96 180 aa5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 SIMC1Q8NDZ2 872 aa5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 RNF31Q96EP0 1072 aa5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 COG8Q96MW5 612 aa5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 WDR24Q96S15 920 aa5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 EIF3CQ99613 913 aaKnown RBP5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 DAPP1Q9UN19 280 aa5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 SORCS3Q9UPU3 1222 aa5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 RRP7AQ9Y3A4 280 aaKnown RBP5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 CEP164Q9UPV0 1460 aa5.39□□□□□ -1.55
HMGB3P18-201ENST00000406327 TRGV11A0A075B6L2 103 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 KRTAP23-1A1A580 65 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 A6NLC8 198 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 PATE3B3GLJ2 98 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 B9A039 149 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 PSMD9O00233 223 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 ZNF185O15231 689 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 ACO1P21399 889 aaKnown RBP5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 KLRK1P26718 216 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 SERPINA4P29622 427 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 GSTM5P46439 218 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 RXRGP48443 463 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 DGKQP52824 942 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 PDE1CQ14123 709 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 CD300EQ496F6 205 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 NAA35Q5VZE5 725 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 C4orf50Q6ZRC1 276 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 Q6ZRM9 215 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 ANKS1BQ7Z6G8 1248 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 TRABD2AQ86V40 505 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 IZUMO1Q8IYV9 350 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 TSPYL6Q8N831 410 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 NGDNQ8NEJ9 315 aaKnown RBP5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 OR1N1Q8NGS0 311 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 CEP70Q8NHQ1 597 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 SUN3Q8TAQ9 357 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 TMEM171Q8WVE6 324 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 OVCA2Q8WZ82 227 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 KCNC2Q96PR1 638 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 TPSD1Q9BZJ3 242 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 VPS45Q9NRW7 570 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 SMC4Q9NTJ3 1288 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 LIN7CQ9NUP9 197 aaKnown RBP5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 TMEM74BQ9NUR3 256 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 VSX1Q9NZR4 365 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 SERTAD3Q9UJW9 196 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 BAG5Q9UL15 447 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 CNTN6Q9UQ52 1028 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 DERAQ9Y315 318 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 DUSP10Q9Y6W6 482 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 XDHP47989 1333 aa5.38□□□□□ -1.55
HMGB3P18-201ENST00000406327 E7EVH7 732 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 GPR42O15529 346 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 SEPT4O43236 478 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 PPP6R2O75170 966 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 BAIAP3O94812 1187 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 FAM163BP0C2L3 166 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 RXRAP19793 462 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 CTSWP56202 376 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 TIRAPP58753 221 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 CHRNDQ07001 517 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 GRM4Q14833 912 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 SMAD1Q15797 465 aaKnown RBP5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 CYP2A13Q16696 494 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 BTBD16Q32M84 506 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 P3H1Q32P28 736 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms