RNA–Protein interactions for RNA: ENST00000405375.5

CDKN1A-203, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-203ENST00000405375 CDHR5Q9HBB8 845 aa16.93■□□□□ 0.3
CDKN1A-203ENST00000405375 GPATCH2LQ9NWQ4 482 aa16.93■□□□□ 0.3
CDKN1A-203ENST00000405375 GJD2Q9UKL4 321 aa16.93■□□□□ 0.3
CDKN1A-203ENST00000405375 CHMP2BQ9UQN3 213 aa16.93■□□□□ 0.3
CDKN1A-203ENST00000405375 GINS2Q9Y248 185 aa16.93■□□□□ 0.3
CDKN1A-203ENST00000405375 HES2Q9Y543 173 aa16.93■□□□□ 0.3
CDKN1A-203ENST00000405375 TEX264Q9Y6I9 313 aa16.93■□□□□ 0.3
CDKN1A-203ENST00000405375 CCL15-CCL14A0A0B4J2E2 113 aa16.92■□□□□ 0.3
CDKN1A-203ENST00000405375 RRN3P2A6NIE6 340 aa16.92■□□□□ 0.3
CDKN1A-203ENST00000405375 H7C0C1 242 aa16.92■□□□□ 0.3
CDKN1A-203ENST00000405375 MDM4O15151 490 aa16.92■□□□□ 0.3
CDKN1A-203ENST00000405375 TGM2P21980 687 aa16.92■□□□□ 0.3
CDKN1A-203ENST00000405375 ELK3P41970 407 aa16.92■□□□□ 0.3
CDKN1A-203ENST00000405375 ATP5OP48047 213 aa16.92■□□□□ 0.3
CDKN1A-203ENST00000405375 HDAC4P56524 1084 aa16.92■□□□□ 0.3
CDKN1A-203ENST00000405375 CCL15Q16663 113 aa16.92■□□□□ 0.3
CDKN1A-203ENST00000405375 CA9Q16790 459 aa16.92■□□□□ 0.3
CDKN1A-203ENST00000405375 SOWAHAQ2M3V2 549 aa16.92■□□□□ 0.3
CDKN1A-203ENST00000405375 ARHGAP17Q68EM7 881 aa16.92■□□□□ 0.3
CDKN1A-203ENST00000405375 SCYL2Q6P3W7 929 aa16.92■□□□□ 0.3
CDKN1A-203ENST00000405375 APBB1IPQ7Z5R6 666 aaPredicted RBP16.92■□□□□ 0.3
CDKN1A-203ENST00000405375 UNC93AQ86WB7 457 aa16.92■□□□□ 0.3
CDKN1A-203ENST00000405375 ECHDC2Q86YB7 292 aa16.92■□□□□ 0.3
CDKN1A-203ENST00000405375 CCDC63Q8NA47 563 aa16.92■□□□□ 0.3
CDKN1A-203ENST00000405375 FAF2Q96CS3 445 aa16.92■□□□□ 0.3
CDKN1A-203ENST00000405375 TINF2Q9BSI4 451 aa16.92■□□□□ 0.3
CDKN1A-203ENST00000405375 B3GNT5Q9BYG0 378 aa16.92■□□□□ 0.3
CDKN1A-203ENST00000405375 GCOM2Q9BZD3 368 aaPredicted RBP16.92■□□□□ 0.3
CDKN1A-203ENST00000405375 FAM49AQ9H0Q0 323 aaPredicted RBP16.92■□□□□ 0.3
CDKN1A-203ENST00000405375 CFAP73A6NFT4 308 aa16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 UNCXA6NJT0 531 aa16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 FGFR1P11362 822 aa16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 MNAT1P51948 309 aa16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 CATSPER4Q7RTX7 472 aa16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 ZDHHC17Q8IUH5 632 aa16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 ZNF670Q9BS34 389 aa16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 SLCO1B3Q9NPD5 702 aa16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 CNTN3Q9P232 1028 aa16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 PAK5Q9P286 719 aa16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 HESX1Q9UBX0 185 aa16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 PHTF1Q9UMS5 762 aa16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 TCRBV9S1A1TA0A576 114 aa16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 APOL1O14791 398 aa16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 EDF1O60869 148 aaKnown RBP16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 ZWINTO95229 277 aa16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 MSH2P43246 934 aa16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 GTF2A2P52657 109 aa16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 BCAR1P56945 870 aa16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 CCDC15Q0P6D6 951 aa16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 GLRA4Q5JXX5 417 aa16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 C9orf57Q5W0N0 161 aa16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 IQSEC1Q6DN90 963 aa16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 NOTUMQ6P988 496 aa16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 AGGF1Q8N302 714 aaeCLIP16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 BEST2Q8NFU1 509 aa16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 CYTH2Q99418 400 aa16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 C11orf84Q9BUA3 381 aaPredicted RBP16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 DPEP3Q9H4B8 488 aa16.91■□□□□ 0.3
CDKN1A-203ENST00000405375 BCLAF3A2AJT9 711 aaKnown RBP16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 CFAP69A5D8W1 941 aa16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 ZNF487B1APH4 448 aa16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 ATP2A2P16615 1042 aaKnown RBP16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 TFE3P19532 575 aaPredicted RBP16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 YARSP54577 528 aaKnown RBP16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 CDC42EP1Q00587 391 aa16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 SWT1Q5T5J6 900 aaKnown RBP16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 LVRNQ6Q4G3 990 aa16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 ANKRD23Q86SG2 305 aa16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 FAM228AQ86W67 206 aa16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 OSMRQ99650 979 aa16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 LPIN3Q9BQK8 851 aa16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 NXF3Q9H4D5 531 aaKnown RBP16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 ECT2Q9H8V3 914 aa16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 MBLAC1A4D2B0 266 aaPredicted RBP16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 KBTBD13C9JR72 458 aa16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 KCNN4O15554 427 aa16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 HCRTO43612 131 aa16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 RECQL4O94761 1208 aa16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 DARSP14868 501 aaKnown RBP16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 RBL1P28749 1068 aa16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 MAGEA6P43360 314 aa16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 PTPN9P43378 593 aa16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 RPL34P49207 117 aaKnown RBP16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 PCBP1Q15365 356 aaKnown RBP eCLIP16.9■□□□□ 0.31e-11■■■■■ 48.5
CDKN1A-203ENST00000405375 SNCBQ16143 134 aa16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 FAM182AQ5T1J6 154 aa16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 ZNF276Q8N554 614 aa16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 BANPQ8N9N5 519 aa16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 OR6B3Q8NGW1 331 aa16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 CENPIQ92674 756 aaPredicted RBP16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 NCAPGQ9BPX3 1015 aa16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 RAB6BQ9NRW1 208 aa16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 HEY1Q9Y5J3 304 aa16.9■□□□□ 0.3
CDKN1A-203ENST00000405375 CHUKO15111 745 aa16.89■□□□□ 0.29
CDKN1A-203ENST00000405375 SNX16P57768 344 aa16.89■□□□□ 0.29
CDKN1A-203ENST00000405375 SYCP2LQ5T4T6 812 aa16.89■□□□□ 0.29
CDKN1A-203ENST00000405375 HHATQ5VTY9 493 aa16.89■□□□□ 0.29
CDKN1A-203ENST00000405375 SLC26A9Q7LBE3 791 aa16.89■□□□□ 0.29
CDKN1A-203ENST00000405375 TBC1D1Q86TI0 1168 aaPredicted RBP16.89■□□□□ 0.29
CDKN1A-203ENST00000405375 NPLOC4Q8TAT6 608 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms