RNA–Protein interactions for RNA: ENST00000405025.5

HDAC11-206, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-206ENST00000405025 USP34Q70CQ2 3546 aa27.72■■■□□ 2.03
HDAC11-206ENST00000405025 FGFR1OPO95684 399 aaKnown RBP27.71■■■□□ 2.03
HDAC11-206ENST00000405025 EGFP01133 1207 aa27.71■■■□□ 2.03
HDAC11-206ENST00000405025 CALCAP01258 141 aa27.71■■■□□ 2.03
HDAC11-206ENST00000405025 CYP17A1P05093 508 aa27.71■■■□□ 2.03
HDAC11-206ENST00000405025 CETN1Q12798 172 aa27.71■■■□□ 2.03
HDAC11-206ENST00000405025 GAB4Q2WGN9 574 aa27.71■■■□□ 2.03
HDAC11-206ENST00000405025 SGO2Q562F6 1265 aa27.71■■■□□ 2.03
HDAC11-206ENST00000405025 PKN3Q6P5Z2 889 aa27.71■■■□□ 2.03
HDAC11-206ENST00000405025 TMEM270Q6UE05 265 aa27.71■■■□□ 2.03
HDAC11-206ENST00000405025 MAMSTRQ6ZN01 415 aa27.71■■■□□ 2.03
HDAC11-206ENST00000405025 PIGZQ86VD9 579 aa27.71■■■□□ 2.03
HDAC11-206ENST00000405025 DDX42Q86XP3 938 aaKnown RBP eCLIP27.71■■■□□ 2.03
HDAC11-206ENST00000405025 P2RY13Q9BPV8 354 aa27.71■■■□□ 2.03
HDAC11-206ENST00000405025 NACA2Q9H009 215 aa27.71■■■□□ 2.03
HDAC11-206ENST00000405025 CYLDQ9NQC7 956 aa27.71■■■□□ 2.03
HDAC11-206ENST00000405025 NUDT5Q9UKK9 219 aa27.71■■■□□ 2.03
HDAC11-206ENST00000405025 PCDHB4Q9Y5E5 795 aa27.71■■■□□ 2.03
HDAC11-206ENST00000405025 USP3Q9Y6I4 520 aa27.71■■■□□ 2.03
HDAC11-206ENST00000405025 DMDP11532 3685 aa27.7■■■□□ 2.03
HDAC11-206ENST00000405025 RNF225M0QZC1 329 aaPredicted RBP27.7■■■□□ 2.02
HDAC11-206ENST00000405025 MDM4O15151 490 aa27.7■■■□□ 2.02
HDAC11-206ENST00000405025 NFATC1O95644 943 aa27.7■■■□□ 2.02
HDAC11-206ENST00000405025 IRF1P10914 325 aa27.7■■■□□ 2.02
HDAC11-206ENST00000405025 HOXC13P31276 330 aa27.7■■■□□ 2.02
HDAC11-206ENST00000405025 GRSF1Q12849 480 aaKnown RBP eCLIP27.7■■■□□ 2.023e-6■■□□□ 12.8
HDAC11-206ENST00000405025 CCDC186Q7Z3E2 898 aa27.7■■■□□ 2.02
HDAC11-206ENST00000405025 CREBRFQ8IUR6 639 aa27.7■■■□□ 2.02
HDAC11-206ENST00000405025 SPEM1Q8N4L4 309 aa27.7■■■□□ 2.02
HDAC11-206ENST00000405025 TFAP2BQ92481 460 aa27.7■■■□□ 2.02
HDAC11-206ENST00000405025 EZH1Q92800 747 aaPredicted RBP27.7■■■□□ 2.02
HDAC11-206ENST00000405025 KREMEN1Q96MU8 473 aa27.7■■■□□ 2.02
HDAC11-206ENST00000405025 ATG2BQ96BY7 2078 aa27.69■■■□□ 2.02
HDAC11-206ENST00000405025 MYOFQ9NZM1 2061 aa27.69■■■□□ 2.02
HDAC11-206ENST00000405025 O00370 1275 aa27.69■■■□□ 2.02
HDAC11-206ENST00000405025 CCR3P51677 355 aa27.69■■■□□ 2.02
HDAC11-206ENST00000405025 AMPD2Q01433 879 aa27.69■■■□□ 2.02
HDAC11-206ENST00000405025 PDE4CQ08493 712 aa27.69■■■□□ 2.02
HDAC11-206ENST00000405025 ADGRG2Q8IZP9 1017 aa27.69■■■□□ 2.02
HDAC11-206ENST00000405025 KIAA1958Q8N8K9 716 aa27.69■■■□□ 2.02
HDAC11-206ENST00000405025 GPT2Q8TD30 523 aa27.69■■■□□ 2.02
HDAC11-206ENST00000405025 NELL1Q92832 810 aa27.69■■■□□ 2.02
HDAC11-206ENST00000405025 ZSWIM1Q9BR11 485 aa27.69■■■□□ 2.02
HDAC11-206ENST00000405025 MTPAPQ9NVV4 582 aaKnown RBP eCLIP27.69■■■□□ 2.02
HDAC11-206ENST00000405025 E2F8A0AVK6 867 aa27.68■■■□□ 2.02
HDAC11-206ENST00000405025 VDRP11473 427 aa27.68■■■□□ 2.02
HDAC11-206ENST00000405025 RARGP13631 454 aa27.68■■■□□ 2.02
HDAC11-206ENST00000405025 DHCR24Q15392 516 aa27.68■■■□□ 2.02
HDAC11-206ENST00000405025 RAB41Q5JT25 222 aa27.68■■■□□ 2.02
HDAC11-206ENST00000405025 UBA3Q8TBC4 463 aa27.68■■■□□ 2.02
HDAC11-206ENST00000405025 CD101Q93033 1021 aa27.68■■■□□ 2.02
HDAC11-206ENST00000405025 KLF16Q9BXK1 252 aaPredicted RBP27.68■■■□□ 2.02
HDAC11-206ENST00000405025 UBXN6Q9BZV1 441 aa27.68■■■□□ 2.02
HDAC11-206ENST00000405025 NAGPAQ9UK23 515 aa27.68■■■□□ 2.02
HDAC11-206ENST00000405025 KIAA1549LQ6ZVL6 1849 aa27.67■■■□□ 2.02
HDAC11-206ENST00000405025 SLC9A3R1O14745 358 aaPredicted RBP27.67■■■□□ 2.02
HDAC11-206ENST00000405025 OPRD1P41143 372 aa27.67■■■□□ 2.02
HDAC11-206ENST00000405025 CXCL12P48061 93 aa27.67■■■□□ 2.02
HDAC11-206ENST00000405025 BCAT1P54687 386 aa27.67■■■□□ 2.02
HDAC11-206ENST00000405025 GCNT1Q02742 428 aa27.67■■■□□ 2.02
HDAC11-206ENST00000405025 NR1H3Q13133 447 aa27.67■■■□□ 2.02
HDAC11-206ENST00000405025 ZC3H14Q6PJT7 736 aaKnown RBP27.67■■■□□ 2.02
HDAC11-206ENST00000405025 BBS7Q8IWZ6 715 aa27.67■■■□□ 2.02
HDAC11-206ENST00000405025 SYNPOQ8N3V7 929 aa27.67■■■□□ 2.02
HDAC11-206ENST00000405025 RBBP8NLQ8NC74 664 aaPredicted RBP27.67■■■□□ 2.02
HDAC11-206ENST00000405025 GBP4Q96PP9 640 aa27.67■■■□□ 2.02
HDAC11-206ENST00000405025 CRACR2AQ9BSW2 395 aa27.67■■■□□ 2.02
HDAC11-206ENST00000405025 ZSCAN32Q9NX65 697 aa27.67■■■□□ 2.02
HDAC11-206ENST00000405025 SH3BP1Q9Y3L3 701 aa27.67■■■□□ 2.02
HDAC11-206ENST00000405025 XPO1O14980 1071 aaKnown RBP27.66■■■□□ 2.02
HDAC11-206ENST00000405025 GREM1O60565 184 aa27.66■■■□□ 2.02
HDAC11-206ENST00000405025 PAEPP09466 180 aa27.66■■■□□ 2.02
HDAC11-206ENST00000405025 BRD2P25440 801 aaKnown RBP27.66■■■□□ 2.02
HDAC11-206ENST00000405025 ATP5C1P36542 298 aaKnown RBP27.66■■■□□ 2.02
HDAC11-206ENST00000405025 ZNF132P52740 706 aa27.66■■■□□ 2.02
HDAC11-206ENST00000405025 DMWDQ09019 674 aa27.66■■■□□ 2.02
HDAC11-206ENST00000405025 BST2Q10589 180 aaKnown RBP27.66■■■□□ 2.02
HDAC11-206ENST00000405025 PKDCCQ504Y2 493 aa27.66■■■□□ 2.02
HDAC11-206ENST00000405025 RHBDF2Q6PJF5 856 aa27.66■■■□□ 2.02
HDAC11-206ENST00000405025 ZBTB44Q8NCP5 570 aa27.66■■■□□ 2.02
HDAC11-206ENST00000405025 NDRG1Q92597 394 aaKnown RBP27.66■■■□□ 2.02
HDAC11-206ENST00000405025 IPO9Q96P70 1041 aaKnown RBP27.66■■■□□ 2.02
HDAC11-206ENST00000405025 HESX1Q9UBX0 185 aa27.66■■■□□ 2.02
HDAC11-206ENST00000405025 K7ESF4 209 aa27.65■■■□□ 2.02
HDAC11-206ENST00000405025 RNF40O75150 1001 aa27.65■■■□□ 2.02
HDAC11-206ENST00000405025 DRD1P21728 446 aa27.65■■■□□ 2.02
HDAC11-206ENST00000405025 TKTL1P51854 596 aa27.65■■■□□ 2.02
HDAC11-206ENST00000405025 APBA1Q02410 837 aa27.65■■■□□ 2.02
HDAC11-206ENST00000405025 C10orf120Q5SQS8 335 aa27.65■■■□□ 2.02
HDAC11-206ENST00000405025 GJB7Q6PEY0 223 aa27.65■■■□□ 2.02
HDAC11-206ENST00000405025 BHLHA9Q7RTU4 235 aa27.65■■■□□ 2.02
HDAC11-206ENST00000405025 C12orf40Q86WS4 652 aa27.65■■■□□ 2.02
HDAC11-206ENST00000405025 ULBP1Q9BZM6 244 aa27.65■■■□□ 2.02
HDAC11-206ENST00000405025 POLR3BQ9NW08 1133 aaPredicted RBP27.65■■■□□ 2.02
HDAC11-206ENST00000405025 TBC1D14Q9P2M4 693 aa27.65■■■□□ 2.02
HDAC11-206ENST00000405025 KIAA1257Q9ULG3 409 aa27.65■■■□□ 2.02
HDAC11-206ENST00000405025 PCDHGA2Q9Y5H1 932 aa27.65■■■□□ 2.02
HDAC11-206ENST00000405025 ANTXRLA6NF34 631 aa27.64■■■□□ 2.02
HDAC11-206ENST00000405025 SLC6A11P48066 632 aa27.64■■■□□ 2.02
HDAC11-206ENST00000405025 SLC8A3P57103 927 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms