RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 UBE2TQ9NPD8 197 aaPredicted RBP19.14■□□□□ 0.65
PTPRN2-204ENST00000404321 DENND4CQ5VZ89 1909 aa19.14■□□□□ 0.65
PTPRN2-204ENST00000404321 SLC9A1P19634 815 aa19.13■□□□□ 0.65
PTPRN2-204ENST00000404321 ERCC5P28715 1186 aaPredicted RBP19.13■□□□□ 0.65
PTPRN2-204ENST00000404321 GCNT1Q02742 428 aa19.13■□□□□ 0.65
PTPRN2-204ENST00000404321 LRRC32Q14392 662 aa19.13■□□□□ 0.65
PTPRN2-204ENST00000404321 FSTL4Q6MZW2 842 aa19.13■□□□□ 0.65
PTPRN2-204ENST00000404321 NDRG1Q92597 394 aaKnown RBP19.13■□□□□ 0.65
PTPRN2-204ENST00000404321 ZSWIM1Q9BR11 485 aa19.13■□□□□ 0.65
PTPRN2-204ENST00000404321 NFATC1O95644 943 aa19.12■□□□□ 0.65
PTPRN2-204ENST00000404321 PAEPP09466 180 aa19.12■□□□□ 0.65
PTPRN2-204ENST00000404321 RARGP13631 454 aa19.12■□□□□ 0.65
PTPRN2-204ENST00000404321 KRT5P13647 590 aa19.12■□□□□ 0.65
PTPRN2-204ENST00000404321 GALK1P51570 392 aa19.12■□□□□ 0.65
PTPRN2-204ENST00000404321 TKTL1P51854 596 aa19.12■□□□□ 0.65
PTPRN2-204ENST00000404321 BCAT1P54687 386 aa19.12■□□□□ 0.65
PTPRN2-204ENST00000404321 GRSF1Q12849 480 aaKnown RBP eCLIP19.12■□□□□ 0.65
PTPRN2-204ENST00000404321 CCINQ13939 588 aa19.12■□□□□ 0.65
PTPRN2-204ENST00000404321 C10orf120Q5SQS8 335 aa19.12■□□□□ 0.65
PTPRN2-204ENST00000404321 CCDC186Q7Z3E2 898 aa19.12■□□□□ 0.65
PTPRN2-204ENST00000404321 DDX42Q86XP3 938 aaKnown RBP eCLIP19.12■□□□□ 0.65
PTPRN2-204ENST00000404321 CYLDQ9NQC7 956 aa19.12■□□□□ 0.65
PTPRN2-204ENST00000404321 SH3BP1Q9Y3L3 701 aa19.12■□□□□ 0.65
PTPRN2-204ENST00000404321 USP3Q9Y6I4 520 aa19.12■□□□□ 0.65
PTPRN2-204ENST00000404321 ANAPC1Q9H1A4 1944 aa19.12■□□□□ 0.65
PTPRN2-204ENST00000404321 M0QYV0 167 aa19.11■□□□□ 0.65
PTPRN2-204ENST00000404321 XPO1O14980 1071 aaKnown RBP19.11■□□□□ 0.65
PTPRN2-204ENST00000404321 EGFP01133 1207 aa19.11■□□□□ 0.65
PTPRN2-204ENST00000404321 CYP17A1P05093 508 aa19.11■□□□□ 0.65
PTPRN2-204ENST00000404321 HOXD11P31277 338 aaPredicted RBP19.11■□□□□ 0.65
PTPRN2-204ENST00000404321 ATP5C1P36542 298 aaKnown RBP19.11■□□□□ 0.65
PTPRN2-204ENST00000404321 NBL1P41271 181 aa19.11■□□□□ 0.65
PTPRN2-204ENST00000404321 RGS7P49802 495 aa19.11■□□□□ 0.65
PTPRN2-204ENST00000404321 AMPD2Q01433 879 aa19.11■□□□□ 0.65
PTPRN2-204ENST00000404321 BST2Q10589 180 aaKnown RBP19.11■□□□□ 0.65
PTPRN2-204ENST00000404321 NR1H3Q13133 447 aa19.11■□□□□ 0.65
PTPRN2-204ENST00000404321 DGKKQ5KSL6 1271 aa19.11■□□□□ 0.65
PTPRN2-204ENST00000404321 TRIM65Q6PJ69 517 aa19.11■□□□□ 0.65
PTPRN2-204ENST00000404321 FAM114A1Q8IWE2 563 aa19.11■□□□□ 0.65
PTPRN2-204ENST00000404321 BBS7Q8IWZ6 715 aa19.11■□□□□ 0.65
PTPRN2-204ENST00000404321 P2RY13Q9BPV8 354 aa19.11■□□□□ 0.65
PTPRN2-204ENST00000404321 ULBP1Q9BZM6 244 aa19.11■□□□□ 0.65
PTPRN2-204ENST00000404321 UBXN6Q9BZV1 441 aa19.11■□□□□ 0.65
PTPRN2-204ENST00000404321 SAMSN1Q9NSI8 373 aaKnown RBP19.11■□□□□ 0.65
PTPRN2-204ENST00000404321 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.11■□□□□ 0.65
PTPRN2-204ENST00000404321 C2orf42Q9NWW7 574 aa19.11■□□□□ 0.65
PTPRN2-204ENST00000404321 KIAA1257Q9ULG3 409 aa19.11■□□□□ 0.65
PTPRN2-204ENST00000404321 E2F8A0AVK6 867 aa19.1■□□□□ 0.65
PTPRN2-204ENST00000404321 PIK3R2O00459 728 aa19.1■□□□□ 0.65
PTPRN2-204ENST00000404321 TRDMT1O14717 391 aaKnown RBP19.1■□□□□ 0.65
PTPRN2-204ENST00000404321 SLC9A3R1O14745 358 aaPredicted RBP19.1■□□□□ 0.65
PTPRN2-204ENST00000404321 PRKCSHP14314 528 aaPredicted RBP19.1■□□□□ 0.65
PTPRN2-204ENST00000404321 SATB1Q01826 763 aa19.1■□□□□ 0.65
PTPRN2-204ENST00000404321 ADIGQ0VDE8 80 aa19.1■□□□□ 0.65
PTPRN2-204ENST00000404321 DHCR24Q15392 516 aa19.1■□□□□ 0.65
PTPRN2-204ENST00000404321 ARHGAP44Q17R89 818 aa19.1■□□□□ 0.65
PTPRN2-204ENST00000404321 TMEM196Q5HYL7 178 aa19.1■□□□□ 0.65
PTPRN2-204ENST00000404321 RAB41Q5JT25 222 aa19.1■□□□□ 0.65
PTPRN2-204ENST00000404321 LCLAT1Q6UWP7 414 aa19.1■□□□□ 0.65
PTPRN2-204ENST00000404321 GBP6Q6ZN66 633 aa19.1■□□□□ 0.65
PTPRN2-204ENST00000404321 MIB1Q86YT6 1006 aa19.1■□□□□ 0.65
PTPRN2-204ENST00000404321 ADGRG2Q8IZP9 1017 aa19.1■□□□□ 0.65
PTPRN2-204ENST00000404321 SECISBP2LQ93073 1101 aaKnown RBP19.1■□□□□ 0.65
PTPRN2-204ENST00000404321 KLF16Q9BXK1 252 aaPredicted RBP19.1■□□□□ 0.65
PTPRN2-204ENST00000404321 LRRC4Q9HBW1 653 aa19.1■□□□□ 0.65
PTPRN2-204ENST00000404321 PRMT8Q9NR22 394 aaPredicted RBP19.1■□□□□ 0.65
PTPRN2-204ENST00000404321 FBXO4Q9UKT5 387 aa19.1■□□□□ 0.65
PTPRN2-204ENST00000404321 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.1■□□□□ 0.65
PTPRN2-204ENST00000404321 MIA3Q5JRA6 1907 aa19.1■□□□□ 0.65
PTPRN2-204ENST00000404321 PIEZO1Q92508 2521 aa19.1■□□□□ 0.65
PTPRN2-204ENST00000404321 ZNF638Q14966 1978 aaKnown RBP19.1■□□□□ 0.65
PTPRN2-204ENST00000404321 KIF26AQ9ULI4 1882 aaPredicted RBP19.09■□□□□ 0.65
PTPRN2-204ENST00000404321 KCNJ18B7U540 433 aa19.09■□□□□ 0.65
PTPRN2-204ENST00000404321 PES1O00541 588 aaKnown RBP19.09■□□□□ 0.65
PTPRN2-204ENST00000404321 RALAP11233 206 aa19.09■□□□□ 0.65
PTPRN2-204ENST00000404321 LCP1P13796 627 aa19.09■□□□□ 0.65
PTPRN2-204ENST00000404321 HOXC13P31276 330 aa19.09■□□□□ 0.65
PTPRN2-204ENST00000404321 USP8P40818 1118 aa19.09■□□□□ 0.65
PTPRN2-204ENST00000404321 ZNF132P52740 706 aa19.09■□□□□ 0.65
PTPRN2-204ENST00000404321 YWHAGP61981 247 aaKnown RBP eCLIP19.09■□□□□ 0.65
PTPRN2-204ENST00000404321 KCNJ12Q14500 433 aa19.09■□□□□ 0.65
PTPRN2-204ENST00000404321 MAN2A1Q16706 1144 aa19.09■□□□□ 0.65
PTPRN2-204ENST00000404321 EXOC3L4Q17RC7 722 aa19.09■□□□□ 0.65
PTPRN2-204ENST00000404321 PKN3Q6P5Z2 889 aa19.09■□□□□ 0.65
PTPRN2-204ENST00000404321 RHBDF2Q6PJF5 856 aa19.09■□□□□ 0.65
PTPRN2-204ENST00000404321 RBM43Q6ZSC3 357 aaKnown RBP19.09■□□□□ 0.65
PTPRN2-204ENST00000404321 CD101Q93033 1021 aa19.09■□□□□ 0.65
PTPRN2-204ENST00000404321 ACP6Q9NPH0 428 aa19.09■□□□□ 0.65
PTPRN2-204ENST00000404321 POLR3BQ9NW08 1133 aaPredicted RBP19.09■□□□□ 0.65
PTPRN2-204ENST00000404321 RASAL2Q9UJF2 1139 aa19.09■□□□□ 0.65
PTPRN2-204ENST00000404321 NFE2L3Q9Y4A8 694 aa19.09■□□□□ 0.65
PTPRN2-204ENST00000404321 ZFHX2Q9C0A1 2572 aaPredicted RBP19.09■□□□□ 0.65
PTPRN2-204ENST00000404321 GFRA3O60609 400 aa19.08■□□□□ 0.65
PTPRN2-204ENST00000404321 ZBED1O96006 694 aa19.08■□□□□ 0.65
PTPRN2-204ENST00000404321 HMBSP08397 361 aa19.08■□□□□ 0.65
PTPRN2-204ENST00000404321 PON1P27169 355 aa19.08■□□□□ 0.65
PTPRN2-204ENST00000404321 PLA2G4AP47712 749 aa19.08■□□□□ 0.65
PTPRN2-204ENST00000404321 CXCL12P48061 93 aa19.08■□□□□ 0.65
PTPRN2-204ENST00000404321 SLC6A11P48066 632 aa19.08■□□□□ 0.65
PTPRN2-204ENST00000404321 CCR3P51677 355 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms