RNA–Protein interactions for RNA: ENST00000403663.6

TRIOBP-203, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-203ENST00000403663 LPPQ93052 612 aa24.58■■□□□ 1.53
TRIOBP-203ENST00000403663 PWWP2AQ96N64 755 aa24.58■■□□□ 1.53
TRIOBP-203ENST00000403663 PAIP2Q9BPZ3 127 aaKnown RBP24.58■■□□□ 1.53
TRIOBP-203ENST00000403663 FAM105AQ9NUU6 356 aa24.58■■□□□ 1.53
TRIOBP-203ENST00000403663 SCN1AP35498 2009 aa24.58■■□□□ 1.53
TRIOBP-203ENST00000403663 FSCN2O14926 492 aa24.58■■□□□ 1.53
TRIOBP-203ENST00000403663 SP100P23497 879 aaPredicted RBP24.58■■□□□ 1.53
TRIOBP-203ENST00000403663 ZNF449Q6P9G9 518 aa24.58■■□□□ 1.53
TRIOBP-203ENST00000403663 APBB1IPQ7Z5R6 666 aaPredicted RBP24.58■■□□□ 1.53
TRIOBP-203ENST00000403663 RBBP8NLQ8NC74 664 aaPredicted RBP24.58■■□□□ 1.53
TRIOBP-203ENST00000403663 C18orf25Q96B23 403 aaPredicted RBP24.58■■□□□ 1.53
TRIOBP-203ENST00000403663 FAM136AQ96C01 138 aa24.58■■□□□ 1.53
TRIOBP-203ENST00000403663 KIF12Q96FN5 646 aa24.58■■□□□ 1.53
TRIOBP-203ENST00000403663 ANKRD36BP1Q96IX9 119 aa24.58■■□□□ 1.53
TRIOBP-203ENST00000403663 PCDHB18PQ96TA0 734 aa24.58■■□□□ 1.53
TRIOBP-203ENST00000403663 TRAFD1O14545 582 aaPredicted RBP24.57■■□□□ 1.52
TRIOBP-203ENST00000403663 DCTN3O75935 186 aa24.57■■□□□ 1.52
TRIOBP-203ENST00000403663 AFF1P51825 1210 aaKnown RBP24.57■■□□□ 1.52
TRIOBP-203ENST00000403663 AP3M2P53677 418 aa24.57■■□□□ 1.52
TRIOBP-203ENST00000403663 LRRC8DQ7L1W4 858 aa24.57■■□□□ 1.52
TRIOBP-203ENST00000403663 C2CD2Q9Y426 696 aa24.57■■□□□ 1.52
TRIOBP-203ENST00000403663 RASA4BC9J798 803 aa24.57■■□□□ 1.52
TRIOBP-203ENST00000403663 RASA4O43374 803 aa24.57■■□□□ 1.52
TRIOBP-203ENST00000403663 RTN3O95197 1032 aaPredicted RBP24.57■■□□□ 1.52
TRIOBP-203ENST00000403663 CBX6O95503 412 aa24.57■■□□□ 1.52
TRIOBP-203ENST00000403663 TNNC2P02585 160 aa24.57■■□□□ 1.52
TRIOBP-203ENST00000403663 ITGB3P05106 788 aa24.57■■□□□ 1.52
TRIOBP-203ENST00000403663 PTK6Q13882 451 aa24.57■■□□□ 1.52
TRIOBP-203ENST00000403663 DSC3Q14574 896 aa24.57■■□□□ 1.52
TRIOBP-203ENST00000403663 ZNF564Q8TBZ8 553 aaPredicted RBP24.57■■□□□ 1.52
TRIOBP-203ENST00000403663 ZFAND2BQ8WV99 257 aa24.57■■□□□ 1.52
TRIOBP-203ENST00000403663 ZFP42Q96MM3 310 aa24.57■■□□□ 1.52
TRIOBP-203ENST00000403663 SLCO1B3Q9NPD5 702 aa24.57■■□□□ 1.52
TRIOBP-203ENST00000403663 ACP6Q9NPH0 428 aa24.57■■□□□ 1.52
TRIOBP-203ENST00000403663 CHST7Q9NS84 486 aa24.57■■□□□ 1.52
TRIOBP-203ENST00000403663 TUBGCP4Q9UGJ1 667 aa24.57■■□□□ 1.52
TRIOBP-203ENST00000403663 RPL26L1Q9UNX3 145 aaKnown RBP24.57■■□□□ 1.52
TRIOBP-203ENST00000403663 KRT19P08727 400 aa24.56■■□□□ 1.52
TRIOBP-203ENST00000403663 ALDH3A1P30838 453 aa24.56■■□□□ 1.52
TRIOBP-203ENST00000403663 NOP14P78316 857 aaKnown RBP24.56■■□□□ 1.52
TRIOBP-203ENST00000403663 TLE2Q04725 743 aa24.56■■□□□ 1.52
TRIOBP-203ENST00000403663 TRIP13Q15645 432 aaPredicted RBP24.56■■□□□ 1.52
TRIOBP-203ENST00000403663 PAWRQ96IZ0 340 aaKnown RBP24.56■■□□□ 1.52
TRIOBP-203ENST00000403663 ADAM2Q99965 735 aa24.56■■□□□ 1.52
TRIOBP-203ENST00000403663 XYLT2Q9H1B5 865 aa24.56■■□□□ 1.52
TRIOBP-203ENST00000403663 CHST12Q9NRB3 414 aa24.56■■□□□ 1.52
TRIOBP-203ENST00000403663 C1orf112Q9NSG2 853 aa24.56■■□□□ 1.52
TRIOBP-203ENST00000403663 NBNO60934 754 aa24.56■■□□□ 1.52
TRIOBP-203ENST00000403663 ASS1P00966 412 aaKnown RBP24.56■■□□□ 1.52
TRIOBP-203ENST00000403663 RASSF2P50749 326 aa24.56■■□□□ 1.52
TRIOBP-203ENST00000403663 FAAP100Q0VG06 881 aa24.56■■□□□ 1.52
TRIOBP-203ENST00000403663 MAML1Q92585 1016 aa24.56■■□□□ 1.52
TRIOBP-203ENST00000403663 NUP85Q9BW27 656 aa24.56■■□□□ 1.52
TRIOBP-203ENST00000403663 TRAIPQ9BWF2 469 aa24.56■■□□□ 1.52
TRIOBP-203ENST00000403663 DCLRE1BQ9H816 532 aa24.56■■□□□ 1.52
TRIOBP-203ENST00000403663 DLGAP2Q9P1A6 1054 aa24.56■■□□□ 1.52
TRIOBP-203ENST00000403663 SELPP16109 830 aa24.55■■□□□ 1.52
TRIOBP-203ENST00000403663 CAV1Q03135 178 aa24.55■■□□□ 1.52
TRIOBP-203ENST00000403663 MUM1Q2TAK8 710 aa24.55■■□□□ 1.52
TRIOBP-203ENST00000403663 ANKRD33Q7Z3H0 272 aa24.55■■□□□ 1.52
TRIOBP-203ENST00000403663 RTN4RL1Q86UN2 441 aaPredicted RBP24.55■■□□□ 1.52
TRIOBP-203ENST00000403663 ATG4AQ8WYN0 398 aa24.55■■□□□ 1.52
TRIOBP-203ENST00000403663 PLEKHA5Q9HAU0 1116 aa24.55■■□□□ 1.52
TRIOBP-203ENST00000403663 CNTN3Q9P232 1028 aa24.55■■□□□ 1.52
TRIOBP-203ENST00000403663 LAMA2P24043 3122 aaKnown RBP24.55■■□□□ 1.52
TRIOBP-203ENST00000403663 PPEF2O14830 753 aa24.55■■□□□ 1.52
TRIOBP-203ENST00000403663 CALCAP01258 141 aa24.55■■□□□ 1.52
TRIOBP-203ENST00000403663 STAT4Q14765 748 aa24.55■■□□□ 1.52
TRIOBP-203ENST00000403663 ZBTB6Q15916 424 aa24.55■■□□□ 1.52
TRIOBP-203ENST00000403663 WDR44Q5JSH3 913 aa24.55■■□□□ 1.52
TRIOBP-203ENST00000403663 PPP1R15BQ5SWA1 713 aa24.55■■□□□ 1.52
TRIOBP-203ENST00000403663 RGS9BPQ6ZS82 235 aa24.55■■□□□ 1.52
TRIOBP-203ENST00000403663 SYDE1Q6ZW31 735 aaPredicted RBP24.55■■□□□ 1.52
TRIOBP-203ENST00000403663 DENND1AQ8TEH3 1009 aa24.55■■□□□ 1.52
TRIOBP-203ENST00000403663 NMRK1Q9NWW6 199 aa24.55■■□□□ 1.52
TRIOBP-203ENST00000403663 WDR35Q9P2L0 1181 aa24.55■■□□□ 1.52
TRIOBP-203ENST00000403663 ANAPC5Q9UJX4 755 aa24.55■■□□□ 1.52
TRIOBP-203ENST00000403663 SMIM28A0A1B0GU29 152 aa24.54■■□□□ 1.52
TRIOBP-203ENST00000403663 ZC3H11AO75152 810 aaKnown RBP eCLIP24.54■■□□□ 1.52
TRIOBP-203ENST00000403663 ATF7P17544 494 aaPredicted RBP24.54■■□□□ 1.52
TRIOBP-203ENST00000403663 POLR2BP30876 1174 aaKnown RBP24.54■■□□□ 1.52
TRIOBP-203ENST00000403663 TRPC3Q13507 836 aa24.54■■□□□ 1.52
TRIOBP-203ENST00000403663 TMED2Q15363 201 aa24.54■■□□□ 1.52
TRIOBP-203ENST00000403663 OR52E8Q6IFG1 317 aa24.54■■□□□ 1.52
TRIOBP-203ENST00000403663 IRGCQ6NXR0 463 aa24.54■■□□□ 1.52
TRIOBP-203ENST00000403663 PRUNE1Q86TP1 453 aa24.54■■□□□ 1.52
TRIOBP-203ENST00000403663 UCMAQ8WVF2 138 aa24.54■■□□□ 1.52
TRIOBP-203ENST00000403663 C10orf82Q8WW14 230 aa24.54■■□□□ 1.52
TRIOBP-203ENST00000403663 LINC01599Q8WXQ3 324 aa24.54■■□□□ 1.52
TRIOBP-203ENST00000403663 SHC3Q92529 594 aa24.54■■□□□ 1.52
TRIOBP-203ENST00000403663 SEZ6LQ9BYH1 1024 aa24.54■■□□□ 1.52
TRIOBP-203ENST00000403663 TLE6Q9H808 572 aa24.54■■□□□ 1.52
TRIOBP-203ENST00000403663 DPP3Q9NY33 737 aa24.54■■□□□ 1.52
TRIOBP-203ENST00000403663 TANC1Q9C0D5 1861 aa24.54■■□□□ 1.52
TRIOBP-203ENST00000403663 SIGLEC16A6NMB1 481 aa24.53■■□□□ 1.52
TRIOBP-203ENST00000403663 SPAG7O75391 227 aa24.53■■□□□ 1.52
TRIOBP-203ENST00000403663 LMNAP02545 664 aaKnown RBP24.53■■□□□ 1.52
TRIOBP-203ENST00000403663 ATF2P15336 505 aa24.53■■□□□ 1.52
TRIOBP-203ENST00000403663 RNF220Q5VTB9 566 aa24.53■■□□□ 1.52
TRIOBP-203ENST00000403663 IFT43Q96FT9 208 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms