RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 CLASP2O75122 1294 aaKnown RBP7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 AKAP3O75969 853 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 GH2P01242 217 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 EPB41P11171 864 aaKnown RBP7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 UCHL3P15374 230 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 RPL13P26373 211 aaKnown RBP7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 HSD3B2P26439 372 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 HOXA13P31271 388 aaPredicted RBP7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 GJA4P35212 333 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 EPS15P42566 896 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 MATR3P43243 847 aaKnown RBP eCLIP7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 CASP4P49662 377 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 MECP2P51608 486 aaKnown RBP7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 RBM5P52756 815 aaKnown RBP eCLIP7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 NAP1L1P55209 391 aaKnown RBP7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 DLX2Q07687 328 aaPredicted RBP7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 SMAD4Q13485 552 aaKnown RBP7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 SLC15A2Q16348 729 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 EXOC3L4Q17RC7 722 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 KIAA0753Q2KHM9 967 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 KRTAP19-4Q3LI73 84 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 KIAA1755Q5JYT7 1200 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 ALS2CLQ60I27 953 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 C8orf74Q6P047 294 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 GBP6Q6ZN66 633 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 PROSER1Q86XN7 944 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 TTLL6Q8N841 843 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 LRRC57Q8N9N7 239 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 OLIG1Q8TAK6 271 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 SLC5A5Q92911 643 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 SLC35C1Q96A29 364 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 HSD17B14Q9BPX1 270 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 BHMT2Q9H2M3 363 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 TDRD3Q9H7E2 651 aaKnown RBP7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 OLFML3Q9NRN5 406 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 RGL1Q9NZL6 768 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 CWC15Q9P013 229 aaKnown RBP7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 WASF3Q9UPY6 502 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 RABGAP1Q9Y3P9 1069 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 WDR81Q562E7 1941 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 UBE4BO95155 1302 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 GOLGA8KD6RF30 607 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 CLIC2O15247 247 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 TBCAO75347 108 aaKnown RBP7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 PSMD10O75832 226 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 SLITRK3O94933 977 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 GCNT3O95395 438 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 JMJD7P0C870 316 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 MUTP22033 750 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 HSPA1LP34931 641 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 ZNF131P52739 623 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 CYP4A11Q02928 519 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 IKQ13123 557 aaPredicted RBP7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 PPP2R5CQ13362 524 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 RPS6KA1Q15418 735 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 UBE2R2Q712K3 238 aaPredicted RBP7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 OTOP1Q7RTM1 612 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 SLFN11Q7Z7L1 901 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 STK32CQ86UX6 486 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 IFT20Q8IY31 132 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 MREGQ8N565 214 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 C2orf69Q8N8R5 385 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 LINC01356Q8N9X3 169 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 USP38Q8NB14 1042 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 FAM76AQ8TAV0 307 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 SCFD2Q8WU76 684 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 CASKIN2Q8WXE0 1202 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 DYDC2Q96IM9 177 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 PBKQ96KB5 322 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 TMEM209Q96SK2 561 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 FIZ1Q96SL8 496 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 RIC8BQ9NVN3 520 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 DMAC2Q9NW81 257 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 SPATA6Q9NWH7 488 aaPredicted RBP7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 RBPJLQ9UBG7 517 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 STXBP5LQ9Y2K9 1186 aa7.27□□□□□ -1.25
CSNK2A1-204ENST00000400227 RGPD3A6NKT7 1758 aaPredicted RBP7.26□□□□□ -1.25
CSNK2A1-204ENST00000400227 RGPD4Q7Z3J3 1758 aa7.26□□□□□ -1.25
CSNK2A1-204ENST00000400227 NCANO14594 1321 aa7.26□□□□□ -1.25
CSNK2A1-204ENST00000400227 FRMPD4Q14CM0 1322 aa7.26□□□□□ -1.25
CSNK2A1-204ENST00000400227 A0A0A6YYK5 440 aaPredicted RBP7.26□□□□□ -1.25
CSNK2A1-204ENST00000400227 SLC12A8A0AV02 714 aa7.26□□□□□ -1.25
CSNK2A1-204ENST00000400227 SH3D21A4FU49 640 aa7.26□□□□□ -1.25
CSNK2A1-204ENST00000400227 DDX3XO00571 662 aaKnown RBP eCLIP7.26□□□□□ -1.252e-18■■■□□ 15.8
CSNK2A1-204ENST00000400227 PLSCR1O15162 318 aa7.26□□□□□ -1.25
CSNK2A1-204ENST00000400227 PLA2G6O60733 806 aa7.26□□□□□ -1.25
CSNK2A1-204ENST00000400227 GFPT2O94808 682 aa7.26□□□□□ -1.25
CSNK2A1-204ENST00000400227 HEXIM1O94992 359 aaKnown RBP7.26□□□□□ -1.25
CSNK2A1-204ENST00000400227 FERP16591 822 aa7.26□□□□□ -1.25
CSNK2A1-204ENST00000400227 NMT1P30419 496 aaKnown RBP7.26□□□□□ -1.25
CSNK2A1-204ENST00000400227 THBS2P35442 1172 aa7.26□□□□□ -1.25
CSNK2A1-204ENST00000400227 CARSP49589 748 aaKnown RBP7.26□□□□□ -1.25
CSNK2A1-204ENST00000400227 PRELPP51888 382 aa7.26□□□□□ -1.25
CSNK2A1-204ENST00000400227 TRAF1Q13077 416 aa7.26□□□□□ -1.25
CSNK2A1-204ENST00000400227 PPFIA1Q13136 1202 aa7.26□□□□□ -1.25
CSNK2A1-204ENST00000400227 CTTNQ14247 550 aaKnown RBP7.26□□□□□ -1.25
CSNK2A1-204ENST00000400227 FAM153CQ494X1 144 aa7.26□□□□□ -1.25
CSNK2A1-204ENST00000400227 PIK3R6Q5UE93 754 aa7.26□□□□□ -1.25
CSNK2A1-204ENST00000400227 CD276Q5ZPR3 534 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms