RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 DEFB107AQ8IZN7 70 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 FBXL13Q8NEE6 735 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 ERLEC1Q96DZ1 483 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 AGO4Q9HCK5 861 aaKnown RBP17.74■□□□□ 0.43
PTPRA-205ENST00000399903 ATAD5Q96QE3 1844 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 F8VP50 259 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 XPO1O14980 1071 aaKnown RBP17.74■□□□□ 0.43
PTPRA-205ENST00000399903 VILLO15195 856 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 WDR46O15213 610 aaKnown RBP17.74■□□□□ 0.43
PTPRA-205ENST00000399903 LYPLA1O75608 230 aaPredicted RBP17.74■□□□□ 0.43
PTPRA-205ENST00000399903 ELK3P41970 407 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 HSD17B4P51659 736 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 CCR3P51677 355 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 ADGRD1Q6QNK2 874 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 HAUS6Q7Z4H7 955 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 ZFP28Q8NHY6 868 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 APOPT1Q96IL0 206 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 USP29Q9HBJ7 922 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 ANLNQ9NQW6 1124 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 E2F8A0AVK6 867 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 PDLIM1O00151 329 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 PGM5Q15124 567 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 TMEM259Q4ZIN3 620 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 FKBP1CQ5VVH2 108 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 POLNQ7Z5Q5 900 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 AGR3Q8TD06 166 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 HELQQ8TDG4 1101 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 DCAKDQ8WVC6 231 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 YIPF2Q9BWQ6 316 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 FOXP3Q9BZS1 431 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 PTTG2Q9NZH5 202 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 SEL1LQ9UBV2 794 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 PAIP2BQ9ULR5 123 aaKnown RBP17.74■□□□□ 0.43
PTPRA-205ENST00000399903 DOLKQ9UPQ8 538 aa17.74■□□□□ 0.43
PTPRA-205ENST00000399903 A0A088AWK7 358 aa17.73■□□□□ 0.43
PTPRA-205ENST00000399903 CDK4P11802 303 aa17.73■□□□□ 0.43
PTPRA-205ENST00000399903 DSG3P32926 999 aa17.73■□□□□ 0.43
PTPRA-205ENST00000399903 RPL5P46777 297 aaKnown RBP17.73■□□□□ 0.43
PTPRA-205ENST00000399903 PSMC5P62195 406 aa17.73■□□□□ 0.43
PTPRA-205ENST00000399903 PDE1CQ14123 709 aaPredicted RBP17.73■□□□□ 0.43
PTPRA-205ENST00000399903 ZNF394Q53GI3 561 aa17.73■□□□□ 0.43
PTPRA-205ENST00000399903 DPY19L2Q6NUT2 758 aa17.73■□□□□ 0.43
PTPRA-205ENST00000399903 TMEM270Q6UE05 265 aa17.73■□□□□ 0.43
PTPRA-205ENST00000399903 RNF148Q8N7C7 305 aa17.73■□□□□ 0.43
PTPRA-205ENST00000399903 ACSS3Q9H6R3 686 aa17.73■□□□□ 0.43
PTPRA-205ENST00000399903 C1orf112Q9NSG2 853 aa17.73■□□□□ 0.43
PTPRA-205ENST00000399903 TTLL13PA6NNM8 815 aa17.73■□□□□ 0.43
PTPRA-205ENST00000399903 H3BSA7 217 aa17.73■□□□□ 0.43
PTPRA-205ENST00000399903 WEE2P0C1S8 567 aa17.73■□□□□ 0.43
PTPRA-205ENST00000399903 YWHABP31946 246 aaKnown RBP17.73■□□□□ 0.43
PTPRA-205ENST00000399903 RARRES1P49788 294 aa17.73■□□□□ 0.43
PTPRA-205ENST00000399903 DCTN2Q13561 401 aaKnown RBP17.73■□□□□ 0.43
PTPRA-205ENST00000399903 TLR1Q15399 786 aa17.73■□□□□ 0.43
PTPRA-205ENST00000399903 RELL1Q8IUW5 271 aa17.73■□□□□ 0.43
PTPRA-205ENST00000399903 FAM71DQ8N9W8 422 aa17.73■□□□□ 0.43
PTPRA-205ENST00000399903 DDX1Q92499 740 aaKnown RBP17.73■□□□□ 0.43
PTPRA-205ENST00000399903 ALKBH8Q96BT7 664 aaKnown RBP17.73■□□□□ 0.43
PTPRA-205ENST00000399903 KBTBD13C9JR72 458 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 GRIN3BO60391 1043 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 FSTL1Q12841 308 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 TNFAIP1Q13829 316 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 TCEAL1Q15170 157 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 MYLK3Q32MK0 819 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 ZBTB46Q86UZ6 589 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 IGDCC3Q8IVU1 814 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 MTMR14Q8NCE2 650 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 EXD1Q8NHP7 514 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 PPP1R36Q96LQ0 422 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 GGA3Q9NZ52 723 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 PLA2G4CQ9UP65 541 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 VWA5AO00534 786 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 STAMBPO95630 424 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 CCDC166P0CW27 439 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 FAXCQ5TGI0 409 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.72■□□□□ 0.43
PTPRA-205ENST00000399903 ACTL9Q8TC94 416 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 MCEEQ96PE7 176 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 PDCD2LQ9BRP1 358 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 TMEM206Q9H813 350 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 PCDHB4Q9Y5E5 795 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 VCPP55072 806 aaKnown RBP17.72■□□□□ 0.43
PTPRA-205ENST00000399903 PDK1Q15118 436 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 HSP90AA5PQ58FG0 334 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 MROH9Q5TGP6 573 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 TMCO4Q5TGY1 634 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 SV2AQ7L0J3 742 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 ZNF554Q86TJ5 538 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 METTL25Q8N6Q8 603 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 VTI1AQ96AJ9 217 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 RMI1Q9H9A7 625 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 KCNK4Q9NYG8 393 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 STRIP2Q9ULQ0 834 aa17.72■□□□□ 0.43
PTPRA-205ENST00000399903 NDC80O14777 642 aa17.71■□□□□ 0.43
PTPRA-205ENST00000399903 CFLARO15519 480 aa17.71■□□□□ 0.43
PTPRA-205ENST00000399903 PSTPIP1O43586 416 aa17.71■□□□□ 0.43
PTPRA-205ENST00000399903 MAP3K6O95382 1288 aa17.71■□□□□ 0.43
PTPRA-205ENST00000399903 TFAP2AP05549 437 aa17.71■□□□□ 0.43
PTPRA-205ENST00000399903 P4HBP07237 508 aaKnown RBP17.71■□□□□ 0.43
PTPRA-205ENST00000399903 SRGAP2CP0DJJ0 459 aa17.71■□□□□ 0.43
PTPRA-205ENST00000399903 SRGAP2BP0DMP2 458 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms