RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 HJURPQ8NCD3 748 aaPredicted RBP8.23□□□□□ -1.09
USP47-203ENST00000399455 POLMQ9NP87 494 aaPredicted RBP8.23□□□□□ -1.09
USP47-203ENST00000399455 DDX4Q9NQI0 724 aaKnown RBP8.23□□□□□ -1.09
USP47-203ENST00000399455 RAB6BQ9NRW1 208 aa8.23□□□□□ -1.09
USP47-203ENST00000399455 AHSPQ9NZD4 102 aa8.23□□□□□ -1.09
USP47-203ENST00000399455 KIF13AQ9H1H9 1805 aa8.23□□□□□ -1.09
USP47-203ENST00000399455 CAMTA1Q9Y6Y1 1673 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 PDZK1P1A8MUH7 402 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 LACTBL1A8MY62 500 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 H3BM21 787 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 MYL2P10916 166 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 CLCN1P35523 988 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 POU4F1Q01851 419 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 SEZ6Q53EL9 994 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 SMG7Q92540 1137 aaKnown RBP8.22□□□□□ -1.09
USP47-203ENST00000399455 NAF1Q96HR8 494 aaKnown RBP8.22□□□□□ -1.09
USP47-203ENST00000399455 GPR20Q99678 358 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 ZDHHC6Q9H6R6 413 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 ST3GAL5Q9UNP4 418 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 ABCC6O95255 1503 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 SYCE1LA8MT33 242 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 MED24O75448 989 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 LMNAP02545 664 aaKnown RBP8.22□□□□□ -1.09
USP47-203ENST00000399455 UCHL3P15374 230 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 SLCO1A2P46721 670 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 ATP1A2P50993 1020 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 SCNN1GP51170 649 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 DAB2P98082 770 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 PPARDQ03181 441 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 PTK7Q13308 1070 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 SHC4Q6S5L8 630 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 PRR23CQ6ZRP0 262 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 TTPALQ9BTX7 342 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 SMPD4Q9NXE4 827 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 LTN1O94822 1766 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 A0A0G2JLL6 359 aaPredicted RBP8.22□□□□□ -1.09
USP47-203ENST00000399455 RECQL4O94761 1208 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 KELP23276 732 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 PMS2P54278 862 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 SH3BGRP55822 239 aaPredicted RBP8.22□□□□□ -1.09
USP47-203ENST00000399455 OTOP2Q7RTS6 562 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 PRRT2Q7Z6L0 340 aaPredicted RBP8.22□□□□□ -1.09
USP47-203ENST00000399455 BSNDQ8WZ55 320 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 C2orf49Q9BVC5 232 aaPredicted RBP8.22□□□□□ -1.09
USP47-203ENST00000399455 SYTL2Q9HCH5 934 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 RNF112Q9ULX5 631 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 KPNA3O00505 521 aaPredicted RBP8.22□□□□□ -1.09
USP47-203ENST00000399455 CYP3A4P08684 503 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 CENPAP49450 140 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 PRKCZQ05513 592 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 USP4Q13107 963 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 NUDCD3Q8IVD9 361 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 OR9Q1Q8NGQ5 310 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 LENG9Q96B70 501 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 PRDM16Q9HAZ2 1276 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 CREBZFQ9NS37 354 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 SPASTQ9UBP0 616 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 CLUHO75153 1309 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 AFDNP55196 1824 aaKnown RBP8.22□□□□□ -1.09
USP47-203ENST00000399455 CCDC195A0A1B0GUA6 201 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 HDCP19113 662 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 SP100P23497 879 aaPredicted RBP8.22□□□□□ -1.09
USP47-203ENST00000399455 GRIN1Q05586 938 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 XRCC4Q13426 336 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 GRM3Q14832 879 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 TCEA2Q15560 299 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 KLHL35Q6PF15 583 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 C12orf50Q8NA57 414 aaPredicted RBP8.22□□□□□ -1.09
USP47-203ENST00000399455 TDRD5Q8NAT2 981 aaKnown RBP8.22□□□□□ -1.09
USP47-203ENST00000399455 ATXN7L3BQ96GX2 97 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 GAD1Q99259 594 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 CNPY3Q9BT09 278 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 ZC3H7BQ9UGR2 993 aaKnown RBP8.22□□□□□ -1.09
USP47-203ENST00000399455 TIMM13Q9Y5L4 95 aaPredicted RBP8.22□□□□□ -1.09
USP47-203ENST00000399455 CCDC189A1A4V9 331 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 CLK3P49761 638 aaKnown RBP8.22□□□□□ -1.09
USP47-203ENST00000399455 PKP1Q13835 747 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 CRY2Q49AN0 593 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 OLFML2BQ68BL8 750 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 TPGS1Q6ZTW0 290 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 ADSSL1Q8N142 457 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 C1orf54Q8WWF1 131 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 TMEM159Q96B96 161 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 TCF25Q9BQ70 676 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 RPRD1BQ9NQG5 326 aaKnown RBP8.22□□□□□ -1.09
USP47-203ENST00000399455 GGT7Q9UJ14 662 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 SUFUQ9UMX1 484 aa8.22□□□□□ -1.09
USP47-203ENST00000399455 GPR25O00155 361 aa8.21□□□□□ -1.09
USP47-203ENST00000399455 IGF2BP3O00425 579 aaKnown RBP eCLIP8.21□□□□□ -1.09
USP47-203ENST00000399455 AOC2O75106 756 aa8.21□□□□□ -1.09
USP47-203ENST00000399455 PHF2O75151 1096 aa8.21□□□□□ -1.09
USP47-203ENST00000399455 FGFR1P11362 822 aa8.21□□□□□ -1.09
USP47-203ENST00000399455 PLA2G4AP47712 749 aa8.21□□□□□ -1.09
USP47-203ENST00000399455 ANTXR2P58335 489 aa8.21□□□□□ -1.09
USP47-203ENST00000399455 RTP1P59025 263 aa8.21□□□□□ -1.09
USP47-203ENST00000399455 GPM6BQ13491 265 aa8.21□□□□□ -1.09
USP47-203ENST00000399455 NPAS4Q8IUM7 802 aa8.21□□□□□ -1.09
USP47-203ENST00000399455 SENP8Q96LD8 212 aa8.21□□□□□ -1.09
USP47-203ENST00000399455 CAPN10Q9HC96 672 aa8.21□□□□□ -1.09
USP47-203ENST00000399455 PRDM10Q9NQV6 1147 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms