RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 TFB1MQ8WVM0 346 aaKnown RBP14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 TRAPPC12Q8WVT3 735 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 ZNF669Q96BR6 464 aaPredicted RBP14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 PLEKHA8Q96JA3 519 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 HIPK3Q9H422 1215 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 H2AFY2Q9P0M6 372 aaPredicted RBP14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 VCLP18206 1134 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 ITIH2P19823 946 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 AKAP5P24588 427 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 NPTX2P47972 431 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 DDX39BQ13838 428 aaKnown RBP14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 HERC6Q8IVU3 1022 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 ANKS1AQ92625 1134 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 KRT35Q92764 455 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 SPRP35270 261 aaPredicted RBP14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 FXR1P51114 621 aaKnown RBP eCLIP14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 PPIGQ13427 754 aaKnown RBP eCLIP14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 ZNF614Q8N883 585 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 FEZF2Q8TBJ5 459 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 RBM12Q9NTZ6 932 aaKnown RBP14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 CLASP2O75122 1294 aaKnown RBP14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 NAB2Q15742 525 aa14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 MRPL42Q9Y6G3 142 aaKnown RBP14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 UBXN8O00124 270 aa14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 LHX1P48742 406 aa14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 ITGA8P53708 1063 aa14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 ANKS6Q68DC2 871 aa14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 SLC27A1Q6PCB7 646 aa14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 HORMAD1Q86X24 394 aa14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 PARP9Q8IXQ6 854 aa14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 CALML6Q8TD86 181 aa14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 SMPD4Q9NXE4 827 aa14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 WWOXQ9NZC7 414 aa14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 DDX20Q9UHI6 824 aaKnown RBP14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 A0A1B0GTH6 734 aa14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 CBX4O00257 560 aa14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 POU4F1Q01851 419 aa14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 CRHR2Q13324 411 aa14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 TTC39BQ5VTQ0 682 aaPredicted RBP14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 LONP2Q86WA8 852 aa14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 RGL4Q8IZJ4 473 aa14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 COPS7BQ9H9Q2 264 aaPredicted RBP14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 RHOCP08134 193 aa14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 ALOX15P16050 662 aaPredicted RBP14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 SOX10P56693 466 aa14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 MAP3K10Q02779 954 aa14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 PTPAQ15257 358 aa14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 FAM171A1Q5VUB5 890 aa14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 SLC2A3P11169 496 aa14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 SERPINB9P50453 376 aa14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 SLC16A1P53985 500 aa14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 PSMC6P62333 389 aa14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 CNGA3Q16281 694 aa14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 BTNL9Q6UXG8 535 aa14.73□□□□□ -0.05
PCDHA11-201ENST00000398640 PHF20L1A8MW92 1017 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 GUCA1CO95843 209 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 YBX3P16989 372 aaKnown RBP eCLIP14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 CREMQ03060 361 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 TATDN1Q6P1N9 297 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 RUBCNQ92622 972 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 GRAMD1AQ96CP6 724 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 KIF2CQ99661 725 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 ZBTB39O15060 712 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 CASP4P49662 377 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 FUT11Q495W5 492 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 ELMO3Q96BJ8 720 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 KCTD10Q9H3F6 313 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 SLC28A3Q9HAS3 691 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 A0A0G2JLL6 359 aaPredicted RBP14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 MAGEA4P43358 317 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 RHOAP61586 193 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 PRKCZQ05513 592 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 CDC16Q13042 620 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 ZNF284Q2VY69 593 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 DEPDC1Q5TB30 811 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 PRRT2Q7Z6L0 340 aaPredicted RBP14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 IL25Q9H293 177 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 SLC24A3Q9HC58 644 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 PKD2L2Q9NZM6 624 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 C2orf81A6NN90 581 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 FGFR1P11362 822 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 TP53BP2Q13625 1128 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 PTK6Q13882 451 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 IRAK1BP1Q5VVH5 260 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 DDX42Q86XP3 938 aaKnown RBP eCLIP14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 NT5DC4Q86YG4 428 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 GALNT4Q8N4A0 578 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 RIN2Q8WYP3 895 aaPredicted RBP14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 RAD51CO43502 376 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 RBP3P10745 1247 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 ITGA7Q13683 1181 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 PLEKHM3Q6ZWE6 761 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 CTU1Q7Z7A3 348 aaKnown RBP14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 CCDC3Q9BQI4 270 aa14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 UBE2OQ9C0C9 1292 aaKnown RBP14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 MRPL17Q9NRX2 175 aaKnown RBP14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 SMG5Q9UPR3 1016 aaKnown RBP14.72□□□□□ -0.05
PCDHA11-201ENST00000398640 FGBP02675 491 aa14.71□□□□□ -0.05
PCDHA11-201ENST00000398640 TCEA2Q15560 299 aa14.71□□□□□ -0.05
PCDHA11-201ENST00000398640 SLC5A5Q92911 643 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms