RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 TGM2P21980 687 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 EEF1DP29692 281 aaKnown RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 RFC1P35251 1148 aaPredicted RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 SCNN1AP37088 669 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 PMS1P54277 932 aaKnown RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 RGS1Q08116 209 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 PUS10Q3MIT2 529 aaKnown RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 VPS26BQ4G0F5 336 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 TIGD5Q53EQ6 642 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 COLEC12Q5KU26 742 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 KIAA0319Q5VV43 1072 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 PPP4R4Q6NUP7 873 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 HORMAD1Q86X24 394 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 KLHL7Q8IXQ5 586 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 BHMTQ93088 406 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 OTUD5Q96G74 571 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 NIFKQ9BYG3 293 aaKnown RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 CYP3A43Q9HB55 503 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 CBX8Q9HC52 389 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 STMN3Q9NZ72 180 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 MBD2Q9UBB5 411 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 SUCOQ9UBS9 1254 aaKnown RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 ZNF214Q9UL59 606 aaPredicted RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 PSAT1Q9Y617 370 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 COL2A1P02458 1487 aaPredicted RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 LTBP4Q8N2S1 1624 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 COL11A1P12107 1806 aaPredicted RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 TRAV19A0A0A6YYK7 116 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 hCG_1642624A0A1W2PR95 340 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 LRRD1A4D1F6 860 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 SLCO1B7G3V0H7 640 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 KCNK3O14649 394 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 ZNF862O60290 1169 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 ITGALP20701 1170 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 SERPINA4P29622 427 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 GRK4P32298 578 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 PEX5P50542 639 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 BCAR1P56945 870 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 GFPT1Q06210 699 aaPredicted RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 ENPEPQ07075 957 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 SLC39A6Q13433 755 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 SPATA31A5Q5VU36 1347 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 C16orf86Q6ZW13 317 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 KCTD1Q719H9 257 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 SPATA31A7Q8IWB4 1347 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 ZFP28Q8NHY6 868 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 HCAR2Q8TDS4 363 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 ABTB1Q969K4 478 aaPredicted RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 MRPL17Q9NRX2 175 aaKnown RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 MAD2L2Q9UI95 211 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 AGO2Q9UKV8 859 aaKnown RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 DTNAQ9Y4J8 743 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 PSMD11O00231 422 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 SLC28A1O00337 649 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 APOA1P02647 267 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 MT-ND3P03897 115 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 VIL1P09327 827 aaKnown RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 CSH1P0DML2 217 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 CSH2P0DML3 217 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 TXNP10599 105 aaKnown RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 PLS3P13797 630 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 POLR2EP19388 210 aaKnown RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 RPL9P32969 192 aaKnown RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 CAPZA1P52907 286 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 PLTPP55058 493 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 COPZ1P61923 177 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 KNOP1Q1ED39 458 aaKnown RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 RALGPS1Q5JS13 557 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 ARHGEF19Q8IW93 802 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 LRRC47Q8N1G4 583 aaKnown RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 PDCD6IPQ8WUM4 868 aaKnown RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 C15orf40Q8WUR7 153 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 SUCLG2Q96I99 432 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 FBRSQ9HAH7 460 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 KLC4Q9NSK0 619 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 DZANK1Q9NVP4 752 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 NFE2L3Q9Y4A8 694 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 EPN1Q9Y6I3 576 aaPredicted RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 NCKAP5O14513 1909 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 DLX3O60479 287 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 RAB2AP61019 212 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 CUL3Q13618 768 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 DNAL1Q4LDG9 190 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 MTFR2Q6P444 385 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 KDM7AQ6ZMT4 941 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 GUF1Q8N442 669 aaKnown RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 ASZ1Q8WWH4 475 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 RFFLQ8WZ73 363 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 PPP1R36Q96LQ0 422 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 KCNS3Q9BQ31 491 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 MRIQ9BWK5 157 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 EFCAB1Q9HAE3 211 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 EMILIN3Q9NT22 766 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 SNX7Q9UNH6 387 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 LZTS1Q9Y250 596 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 SLC27A6Q9Y2P4 619 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 COL5A3P25940 1745 aaPredicted RBP2.81□□□□□ -1.96
CHD9-202ENST00000398510 KNL1Q8NG31 2342 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 LY75O60449 1722 aa2.81□□□□□ -1.96
CHD9-202ENST00000398510 ONECUT3O60422 494 aaPredicted RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms