RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 PEX26Q7Z412 305 aa14.91□□□□□ -0.02
SKA1-202ENST00000398452 ELMOD1Q8N336 334 aa14.91□□□□□ -0.02
SKA1-202ENST00000398452 MRPL43Q8N983 215 aaKnown RBP14.91□□□□□ -0.02
SKA1-202ENST00000398452 ZMIZ2Q8NF64 920 aa14.91□□□□□ -0.02
SKA1-202ENST00000398452 TPCN2Q8NHX9 752 aa14.91□□□□□ -0.02
SKA1-202ENST00000398452 ATRIPQ8WXE1 791 aa14.91□□□□□ -0.02
SKA1-202ENST00000398452 IRGQQ8WZA9 623 aa14.91□□□□□ -0.02
SKA1-202ENST00000398452 MCRS1Q96EZ8 462 aa14.91□□□□□ -0.02
SKA1-202ENST00000398452 NCAPGQ9BPX3 1015 aa14.91□□□□□ -0.02
SKA1-202ENST00000398452 ULBP1Q9BZM6 244 aa14.91□□□□□ -0.02
SKA1-202ENST00000398452 THEGQ9P2T0 379 aa14.91□□□□□ -0.02
SKA1-202ENST00000398452 DNAI1Q9UI46 699 aa14.91□□□□□ -0.02
SKA1-202ENST00000398452 AMFRQ9UKV5 643 aa14.91□□□□□ -0.02
SKA1-202ENST00000398452 STAP1Q9ULZ2 295 aa14.91□□□□□ -0.02
SKA1-202ENST00000398452 CHD9Q3L8U1 2897 aa14.91□□□□□ -0.02
SKA1-202ENST00000398452 VWA8A3KMH1 1905 aa14.9□□□□□ -0.02
SKA1-202ENST00000398452 CTAGE9A4FU28 777 aa14.9□□□□□ -0.02
SKA1-202ENST00000398452 ADAM12O43184 909 aa14.9□□□□□ -0.02
SKA1-202ENST00000398452 PAPSS1O43252 624 aaPredicted RBP14.9□□□□□ -0.02
SKA1-202ENST00000398452 HSF2BPO75031 334 aa14.9□□□□□ -0.02
SKA1-202ENST00000398452 PALMO75781 387 aa14.9□□□□□ -0.02
SKA1-202ENST00000398452 GLI1P08151 1106 aa14.9□□□□□ -0.02
SKA1-202ENST00000398452 PSMA2P25787 234 aa14.9□□□□□ -0.02
SKA1-202ENST00000398452 SDC4P31431 198 aa14.9□□□□□ -0.02
SKA1-202ENST00000398452 SLC1A1P43005 524 aa14.9□□□□□ -0.02
SKA1-202ENST00000398452 SSR1P43307 286 aaKnown RBP14.9□□□□□ -0.02
SKA1-202ENST00000398452 RPL34P49207 117 aaKnown RBP14.9□□□□□ -0.02
SKA1-202ENST00000398452 CACNA2D1P54289 1103 aa14.9□□□□□ -0.02
SKA1-202ENST00000398452 EPHB3P54753 998 aa14.9□□□□□ -0.02
SKA1-202ENST00000398452 ERVFC1P60507 584 aa14.9□□□□□ -0.02
SKA1-202ENST00000398452 PIGHQ14442 188 aaPredicted RBP14.9□□□□□ -0.02
SKA1-202ENST00000398452 ODF2Q5BJF6 829 aa14.9□□□□□ -0.02
SKA1-202ENST00000398452 ITIH5Q86UX2 942 aa14.9□□□□□ -0.02
SKA1-202ENST00000398452 SLC35F6Q8N357 371 aa14.9□□□□□ -0.02
SKA1-202ENST00000398452 KIF18AQ8NI77 898 aa14.9□□□□□ -0.02
SKA1-202ENST00000398452 SPATA17Q96L03 361 aa14.9□□□□□ -0.02
SKA1-202ENST00000398452 SLITRK1Q96PX8 696 aa14.9□□□□□ -0.02
SKA1-202ENST00000398452 ASNSD1Q9NWL6 643 aa14.9□□□□□ -0.02
SKA1-202ENST00000398452 TJP2Q9UDY2 1190 aa14.9□□□□□ -0.02
SKA1-202ENST00000398452 CHORDC1Q9UHD1 332 aaPredicted RBP14.9□□□□□ -0.02
SKA1-202ENST00000398452 KIAA1671Q9BY89 1806 aa14.89□□□□□ -0.03
SKA1-202ENST00000398452 C2orf71A6NGG8 1288 aa14.89□□□□□ -0.03
SKA1-202ENST00000398452 LILRB3O75022 631 aa14.89□□□□□ -0.03
SKA1-202ENST00000398452 RNF8O76064 485 aa14.89□□□□□ -0.03
SKA1-202ENST00000398452 USP17L7P0C7H9 530 aa14.89□□□□□ -0.03
SKA1-202ENST00000398452 CSH1P0DML2 217 aa14.89□□□□□ -0.03
SKA1-202ENST00000398452 CSH2P0DML3 217 aa14.89□□□□□ -0.03
SKA1-202ENST00000398452 PDGFRAP16234 1089 aa14.89□□□□□ -0.03
SKA1-202ENST00000398452 GPD1P21695 349 aa14.89□□□□□ -0.03
SKA1-202ENST00000398452 YWHAQP27348 245 aa14.89□□□□□ -0.03
SKA1-202ENST00000398452 DAOAP59103 153 aa14.89□□□□□ -0.03
SKA1-202ENST00000398452 YWHAZP63104 245 aaKnown RBP14.89□□□□□ -0.03
SKA1-202ENST00000398452 RAB41Q5JT25 222 aa14.89□□□□□ -0.03
SKA1-202ENST00000398452 BTBD8Q5XKL5 378 aa14.89□□□□□ -0.03
SKA1-202ENST00000398452 C11orf63Q6NUN7 778 aa14.89□□□□□ -0.03
SKA1-202ENST00000398452 OLFML1Q6UWY5 402 aa14.89□□□□□ -0.03
SKA1-202ENST00000398452 SYT10Q6XYQ8 523 aa14.89□□□□□ -0.03
SKA1-202ENST00000398452 NYAP1Q6ZVC0 841 aa14.89□□□□□ -0.03
SKA1-202ENST00000398452 SLC26A9Q7LBE3 791 aa14.89□□□□□ -0.03
SKA1-202ENST00000398452 TCEAL8Q8IYN2 117 aa14.89□□□□□ -0.03
SKA1-202ENST00000398452 SCML4Q8N228 414 aa14.89□□□□□ -0.03
SKA1-202ENST00000398452 FBXO32Q969P5 355 aa14.89□□□□□ -0.03
SKA1-202ENST00000398452 NAPGQ99747 312 aaPredicted RBP14.89□□□□□ -0.03
SKA1-202ENST00000398452 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.89□□□□□ -0.03
SKA1-202ENST00000398452 MAGED2Q9UNF1 606 aaPredicted RBP14.89□□□□□ -0.03
SKA1-202ENST00000398452 JRKLQ9Y4A0 524 aa14.89□□□□□ -0.03
SKA1-202ENST00000398452 YIPF1Q9Y548 306 aa14.89□□□□□ -0.03
SKA1-202ENST00000398452 PCDHGC5Q9Y5F6 944 aa14.89□□□□□ -0.03
SKA1-202ENST00000398452 CAPN6Q9Y6Q1 641 aa14.89□□□□□ -0.03
SKA1-202ENST00000398452 MYH10P35580 1976 aa14.89□□□□□ -0.03
SKA1-202ENST00000398452 TCF20Q9UGU0 1960 aaKnown RBP14.88□□□□□ -0.03
SKA1-202ENST00000398452 TMEM191CA6NGB0 347 aa14.88□□□□□ -0.03
SKA1-202ENST00000398452 HHLA1C9JL84 531 aa14.88□□□□□ -0.03
SKA1-202ENST00000398452 FSCN2O14926 492 aa14.88□□□□□ -0.03
SKA1-202ENST00000398452 TGM5O43548 720 aa14.88□□□□□ -0.03
SKA1-202ENST00000398452 BUB1BO60566 1050 aaPredicted RBP14.88□□□□□ -0.03
SKA1-202ENST00000398452 GRAP2O75791 330 aa14.88□□□□□ -0.03
SKA1-202ENST00000398452 ABL1P00519 1130 aa14.88□□□□□ -0.03
SKA1-202ENST00000398452 C1RP00736 705 aa14.88□□□□□ -0.03
SKA1-202ENST00000398452 RALAP11233 206 aa14.88□□□□□ -0.03
SKA1-202ENST00000398452 GPR15P49685 360 aa14.88□□□□□ -0.03
SKA1-202ENST00000398452 HADHQ16836 314 aaKnown RBP14.88□□□□□ -0.03
SKA1-202ENST00000398452 ZFYVE27Q5T4F4 411 aa14.88□□□□□ -0.03
SKA1-202ENST00000398452 SDHAF4Q5VUM1 108 aa14.88□□□□□ -0.03
SKA1-202ENST00000398452 LLGL2Q6P1M3 1020 aa14.88□□□□□ -0.03
SKA1-202ENST00000398452 UBL4BQ8N7F7 174 aa14.88□□□□□ -0.03
SKA1-202ENST00000398452 KREMEN2Q8NCW0 462 aa14.88□□□□□ -0.03
SKA1-202ENST00000398452 PDZD8Q8NEN9 1154 aa14.88□□□□□ -0.03
SKA1-202ENST00000398452 FNIP1Q8TF40 1166 aa14.88□□□□□ -0.03
SKA1-202ENST00000398452 GIPC2Q8TF65 315 aa14.88□□□□□ -0.03
SKA1-202ENST00000398452 RNF139Q8WU17 664 aa14.88□□□□□ -0.03
SKA1-202ENST00000398452 IRX2Q9BZI1 471 aaPredicted RBP14.88□□□□□ -0.03
SKA1-202ENST00000398452 POPDC2Q9HBU9 364 aa14.88□□□□□ -0.03
SKA1-202ENST00000398452 RRN3Q9NYV6 651 aa14.88□□□□□ -0.03
SKA1-202ENST00000398452 UXTQ9UBK9 157 aaPredicted RBP14.88□□□□□ -0.03
SKA1-202ENST00000398452 COG5Q9UP83 839 aa14.88□□□□□ -0.03
SKA1-202ENST00000398452 USTQ9Y2C2 406 aa14.88□□□□□ -0.03
SKA1-202ENST00000398452 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.88□□□□□ -0.03
SKA1-202ENST00000398452 INSL5Q9Y5Q6 135 aa14.88□□□□□ -0.03
SKA1-202ENST00000398452 NLRC5Q86WI3 1866 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms