RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 TNS2Q63HR2 1409 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 SMIM31A0A1B0GVY4 71 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 APOC4-APOC2K7ER74 178 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 DAB1O75553 588 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 APOC2P02655 101 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 PDGFRBP09619 1106 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 SPATA31C1P0DKV0 1188 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 CYP2C8P10632 490 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 VDRP11473 427 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 ANPEPP15144 967 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 ACADSBP45954 432 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 IMPG1Q17R60 797 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 FAM83EQ2M2I3 478 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 GOLGA7BQ2TAP0 167 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 LRRC38Q5VT99 294 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 KYAT3Q6YP21 454 aaKnown RBP11.43□□□□□ -0.58
HPS4-202ENST00000398145 RIPOR1Q6ZS17 1223 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 ADCK1Q86TW2 530 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 KIAA1257Q9ULG3 409 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 TRDMT1O14717 391 aaKnown RBP11.42□□□□□ -0.58
HPS4-202ENST00000398145 MEIS2O14770 477 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 ALOX15BO15296 676 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 TAL1P17542 331 aaPredicted RBP11.42□□□□□ -0.58
HPS4-202ENST00000398145 ORC1Q13415 861 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 MAP4K3Q8IVH8 894 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 OR6Y1Q8NGX8 325 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 FAM172AQ8WUF8 416 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 AGO4Q9HCK5 861 aaKnown RBP11.42□□□□□ -0.58
HPS4-202ENST00000398145 KCNQ5Q9NR82 932 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 SCHIP1Q9P0W5 487 aaPredicted RBP11.42□□□□□ -0.58
HPS4-202ENST00000398145 ZNF70Q9UC06 446 aaPredicted RBP11.42□□□□□ -0.58
HPS4-202ENST00000398145 ZMYM2Q9UBW7 1377 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 F8W8V4 182 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 TBC1D4O60343 1298 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 BST1Q10588 318 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 MAMLD1Q13495 774 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 DCTN2Q13561 401 aaKnown RBP11.42□□□□□ -0.58
HPS4-202ENST00000398145 ACVR2BQ13705 512 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 DPYSL3Q14195 570 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 TWF2Q6IBS0 349 aaKnown RBP11.42□□□□□ -0.58
HPS4-202ENST00000398145 STRA8Q7Z7C7 330 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 LRRC71Q8N4P6 559 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 ALLCQ8N6M5 410 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 CALML6Q8TD86 181 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 USP33Q8TEY7 942 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 FAR2Q96K12 515 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 C10orf88Q9H8K7 445 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 DDX28Q9NUL7 540 aaKnown RBP11.42□□□□□ -0.58
HPS4-202ENST00000398145 PRMT7Q9NVM4 692 aaPredicted RBP11.42□□□□□ -0.58
HPS4-202ENST00000398145 IFT172Q9UG01 1749 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 SPDYE2BA6NHP3 402 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 SPDYE6P0CI01 402 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 SOX11P35716 441 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 LRRC8BQ6P9F7 803 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 B3GNT6Q6ZMB0 384 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 WDR49Q8IV35 697 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 TDRD5Q8NAT2 981 aaKnown RBP11.42□□□□□ -0.58
HPS4-202ENST00000398145 ZSWIM2Q8NEG5 633 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 ASAP3Q8TDY4 903 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 LRRC39Q96DD0 335 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 HSD17B14Q9BPX1 270 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 TMEM79Q9BSE2 394 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 MAP3K20Q9NYL2 800 aaKnown RBP11.42□□□□□ -0.58
HPS4-202ENST00000398145 CLIC5Q9NZA1 410 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 SLC12A4Q9UP95 1085 aa11.42□□□□□ -0.58
HPS4-202ENST00000398145 GSC2O15499 205 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 TRIM13O60858 407 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 VIL1P09327 827 aaKnown RBP11.41□□□□□ -0.58
HPS4-202ENST00000398145 ME2P23368 584 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 PTPN11Q06124 597 aaPredicted RBP11.41□□□□□ -0.58
HPS4-202ENST00000398145 TSTA3Q13630 321 aaPredicted RBP11.41□□□□□ -0.58
HPS4-202ENST00000398145 ATP13A4Q4VNC1 1196 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 SLITRK1Q96PX8 696 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 SARS2Q9NP81 518 aaKnown RBP11.41□□□□□ -0.58
HPS4-202ENST00000398145 NCKIPSDQ9NZQ3 722 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 BCL9O00512 1426 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 A0A1W2PPM1 405 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 DPPA5A6NC42 116 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 NFIBO00712 420 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 PIAS1O75925 651 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 MOCS2O96007 188 aaPredicted RBP11.41□□□□□ -0.58
HPS4-202ENST00000398145 GP5P40197 560 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 GLRBP48167 497 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 CHN2P52757 468 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 ADARP55265 1226 aaKnown RBP11.41□□□□□ -0.58
HPS4-202ENST00000398145 SOX10P56693 466 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 MRPS15P82914 257 aaKnown RBP11.41□□□□□ -0.58
HPS4-202ENST00000398145 SLC25A3Q00325 362 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 NKX2-3Q8TAU0 364 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 USP13Q92995 863 aaPredicted RBP11.41□□□□□ -0.58
HPS4-202ENST00000398145 ECSITQ9BQ95 431 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 FHDC1Q9C0D6 1143 aaPredicted RBP11.41□□□□□ -0.58
HPS4-202ENST00000398145 CACYBPQ9HB71 228 aaKnown RBP11.41□□□□□ -0.58
HPS4-202ENST00000398145 DDX4Q9NQI0 724 aaKnown RBP11.41□□□□□ -0.58
HPS4-202ENST00000398145 KIF17Q9P2E2 1029 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 SAE1Q9UBE0 346 aaPredicted RBP11.41□□□□□ -0.58
HPS4-202ENST00000398145 TCRBV7S2A1N4TA0A589 114 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 PSMD10O75832 226 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 MYL4P12829 197 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 DAB2P98082 770 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms