RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 DNA2P51530 1060 aa20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 SLC6A3Q01959 620 aa20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 MTMR3Q13615 1198 aa20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 RSPO2Q6UXX9 243 aaPredicted RBP20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 KLHL7Q8IXQ5 586 aa20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 ARL8AQ96BM9 186 aa20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 PIWIL1Q96J94 861 aaKnown RBP20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 DMAP1Q9NPF5 467 aaPredicted RBP20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 ABI2Q9NYB9 513 aaPredicted RBP20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 IP6K2Q9UHH9 426 aa20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 RSPH14Q9UHP6 348 aa20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 NR2E3Q9Y5X4 410 aa20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 SPOPO43791 374 aa20.24■□□□□ 0.83
PDLIM2-204ENST00000397760 CPB1P15086 417 aa20.24■□□□□ 0.83
PDLIM2-204ENST00000397760 CYP2F1P24903 491 aa20.24■□□□□ 0.83
PDLIM2-204ENST00000397760 RNASE9P60153 205 aaKnown RBP20.24■□□□□ 0.83
PDLIM2-204ENST00000397760 ADIGQ0VDE8 80 aa20.24■□□□□ 0.83
PDLIM2-204ENST00000397760 SPDYCQ5MJ68 293 aa20.24■□□□□ 0.83
PDLIM2-204ENST00000397760 DDX53Q86TM3 631 aaKnown RBP20.24■□□□□ 0.83
PDLIM2-204ENST00000397760 CPNE8Q86YQ8 564 aa20.24■□□□□ 0.83
PDLIM2-204ENST00000397760 ZBTB9Q96C00 473 aa20.24■□□□□ 0.83
PDLIM2-204ENST00000397760 CARD9Q9H257 536 aa20.24■□□□□ 0.83
PDLIM2-204ENST00000397760 MTRRQ9UBK8 725 aa20.24■□□□□ 0.83
PDLIM2-204ENST00000397760 LCMT1Q9UIC8 334 aa20.24■□□□□ 0.83
PDLIM2-204ENST00000397760 PCDHB5Q9Y5E4 795 aa20.24■□□□□ 0.83
PDLIM2-204ENST00000397760 ZSCAN5CA6NGD5 496 aaPredicted RBP20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 HHLA1C9JL84 531 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 KRIT1O00522 736 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 C2CD2LO14523 706 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 LINC00271P0C7V0 271 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 SLC1A1P43005 524 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 CORO7P57737 925 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 OGDHQ02218 1023 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 GPR17Q13304 367 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 PSMD5Q16401 504 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 RASIP1Q5U651 963 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 EMC1Q8N766 993 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 FBXO22Q8NEZ5 403 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 SP7Q8TDD2 431 aaPredicted RBP20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 CLEC4CQ8WTT0 213 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 CLP1Q92989 425 aaKnown RBP20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 FUBP3Q96I24 572 aaKnown RBP eCLIP20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 PGLYRP2Q96PD5 576 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 HERC2P3Q9BVR0 1158 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 BACE2Q9Y5Z0 518 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 VWA8A3KMH1 1905 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 PTPRSQ13332 1948 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 ESYT3A0FGR9 886 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 GRIK1P39086 918 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 GLUD2P49448 558 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 NDUFV1P49821 464 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 TKTL1P51854 596 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 GNGT1P63211 74 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 TAF5Q15542 800 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 FOXR1Q6PIV2 292 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 SIX6OS1Q8N1H7 587 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 ATP6V1G3Q96LB4 118 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 FAM114A2Q9NRY5 505 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 CDY1Q9Y6F8 540 aa20.23■□□□□ 0.83
PDLIM2-204ENST00000397760 F8VP50 259 aa20.22■□□□□ 0.83
PDLIM2-204ENST00000397760 GRAP2O75791 330 aa20.22■□□□□ 0.83
PDLIM2-204ENST00000397760 ECHS1P30084 290 aa20.22■□□□□ 0.83
PDLIM2-204ENST00000397760 MAGEA9P43362 315 aa20.22■□□□□ 0.83
PDLIM2-204ENST00000397760 DSG1Q02413 1049 aa20.22■□□□□ 0.83
PDLIM2-204ENST00000397760 KRT17Q04695 432 aa20.22■□□□□ 0.83
PDLIM2-204ENST00000397760 ZNF252P-AS1Q0IIN9 211 aa20.22■□□□□ 0.83
PDLIM2-204ENST00000397760 SMARCB1Q12824 385 aa20.22■□□□□ 0.83
PDLIM2-204ENST00000397760 PIGHQ14442 188 aaPredicted RBP20.22■□□□□ 0.83
PDLIM2-204ENST00000397760 RAB41Q5JT25 222 aa20.22■□□□□ 0.83
PDLIM2-204ENST00000397760 GPRIN1Q7Z2K8 1008 aa20.22■□□□□ 0.83
PDLIM2-204ENST00000397760 SPATS2Q86XZ4 545 aaKnown RBP20.22■□□□□ 0.83
PDLIM2-204ENST00000397760 ATAD1Q8NBU5 361 aa20.22■□□□□ 0.83
PDLIM2-204ENST00000397760 FNIP1Q8TF40 1166 aa20.22■□□□□ 0.83
PDLIM2-204ENST00000397760 LCHNA4D1U4 455 aa20.21■□□□□ 0.83
PDLIM2-204ENST00000397760 GOLGA6L10A6NI86 522 aa20.21■□□□□ 0.83
PDLIM2-204ENST00000397760 MIF4GDA9UHW6 222 aaKnown RBP20.21■□□□□ 0.83
PDLIM2-204ENST00000397760 DDX3YO15523 660 aaKnown RBP20.21■□□□□ 0.83
PDLIM2-204ENST00000397760 FGF18O76093 207 aa20.21■□□□□ 0.83
PDLIM2-204ENST00000397760 KRT14P02533 472 aa20.21■□□□□ 0.83
PDLIM2-204ENST00000397760 RPL17P18621 184 aaKnown RBP20.21■□□□□ 0.83
PDLIM2-204ENST00000397760 PSMA2P25787 234 aa20.21■□□□□ 0.83
PDLIM2-204ENST00000397760 MAN1A1P33908 653 aa20.21■□□□□ 0.83
PDLIM2-204ENST00000397760 SCNN1AP37088 669 aa20.21■□□□□ 0.83
PDLIM2-204ENST00000397760 MAGEA10P43363 369 aaPredicted RBP20.21■□□□□ 0.83
PDLIM2-204ENST00000397760 ADCY1Q08828 1119 aa20.21■□□□□ 0.83
PDLIM2-204ENST00000397760 C9orf50Q5SZB4 431 aa20.21■□□□□ 0.83
PDLIM2-204ENST00000397760 SLC8B1Q6J4K2 584 aa20.21■□□□□ 0.83
PDLIM2-204ENST00000397760 VSTM1Q6UX27 236 aa20.21■□□□□ 0.83
PDLIM2-204ENST00000397760 RNF19BQ6ZMZ0 732 aa20.21■□□□□ 0.83
PDLIM2-204ENST00000397760 SLC26A9Q7LBE3 791 aa20.21■□□□□ 0.83
PDLIM2-204ENST00000397760 SCN4BQ8IWT1 228 aa20.21■□□□□ 0.83
PDLIM2-204ENST00000397760 VPS52Q8N1B4 723 aa20.21■□□□□ 0.83
PDLIM2-204ENST00000397760 ARFGAP2Q8N6H7 521 aa20.21■□□□□ 0.83
PDLIM2-204ENST00000397760 KHSRPQ92945 711 aaKnown RBP eCLIP20.21■□□□□ 0.83
PDLIM2-204ENST00000397760 CD101Q93033 1021 aa20.21■□□□□ 0.83
PDLIM2-204ENST00000397760 PNPLA8Q9NP80 782 aa20.21■□□□□ 0.83
PDLIM2-204ENST00000397760 USTQ9Y2C2 406 aa20.21■□□□□ 0.83
PDLIM2-204ENST00000397760 ATXN2Q99700 1313 aaKnown RBP20.21■□□□□ 0.83
PDLIM2-204ENST00000397760 MTMR11A4FU01 709 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms