RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 SOCS7O14512 581 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 GYG2O15488 501 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 PLA2G6O60733 806 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 AVILO75366 819 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 GABBR2O75899 941 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 MTA2O94776 668 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 PARNO95453 639 aaKnown RBP5.23□□□□□ -1.57
SSR1-202ENST00000397511 CPA3P15088 417 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 TCF7P36402 384 aaPredicted RBP5.23□□□□□ -1.57
SSR1-202ENST00000397511 HDAC4P56524 1084 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 BASP1P80723 227 aaKnown RBP5.23□□□□□ -1.57
SSR1-202ENST00000397511 MAP3K10Q02779 954 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 KLF1Q13351 362 aaPredicted RBP5.23□□□□□ -1.57
SSR1-202ENST00000397511 TNFAIP1Q13829 316 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 PTK6Q13882 451 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 CAPSQ13938 189 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 ADRM1Q16186 407 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 PDCD4Q53EL6 469 aaKnown RBP5.23□□□□□ -1.57
SSR1-202ENST00000397511 XKR3Q5GH77 459 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 SH3PXD2AQ5TCZ1 1133 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 FAXCQ5TGI0 409 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 ANKRD22Q5VYY1 191 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 THOC7Q6I9Y2 204 aaKnown RBP5.23□□□□□ -1.57
SSR1-202ENST00000397511 LRRC8BQ6P9F7 803 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 RHBDF2Q6PJF5 856 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 TRIM67Q6ZTA4 783 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 NIPA1Q7RTP0 329 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 AGBL3Q8NEM8 1001 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 JOSD2Q8TAC2 188 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 GRK7Q8WTQ7 553 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 EIF2AQ9BY44 585 aaKnown RBP5.23□□□□□ -1.57
SSR1-202ENST00000397511 FAM117AQ9C073 453 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 MRPL47Q9HD33 250 aaKnown RBP5.23□□□□□ -1.57
SSR1-202ENST00000397511 PARVAQ9NVD7 372 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 FAIMQ9NVQ4 179 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 NDE1Q9NXR1 346 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 KLHL42Q9P2K6 505 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 GRID1Q9ULK0 1009 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 PHTF1Q9UMS5 762 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 EFR3BQ9Y2G0 817 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 TCRBV7S3A2A0A539 114 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 C2orf71A6NGG8 1288 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 BOLA2-SMG1P6H3BVE0 249 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 NDC80O14777 642 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 LSM1O15116 133 aaKnown RBP5.22□□□□□ -1.57
SSR1-202ENST00000397511 STRNO43815 780 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 CST8O60676 142 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 CDH16O75309 829 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 SUPT20HL2P0C7V6 817 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 KRT4P19013 534 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 GARTP22102 1010 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 PSMA2P25787 234 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 CRABP2P29373 138 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 ACADVLP49748 655 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 WDR4P57081 412 aaKnown RBP5.22□□□□□ -1.57
SSR1-202ENST00000397511 MED21Q13503 144 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 SPIDRQ14159 915 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 TFDP1Q14186 410 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 PSMD6Q15008 389 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 STXBP2Q15833 593 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 CLPPQ16740 277 aaPredicted RBP5.22□□□□□ -1.57
SSR1-202ENST00000397511 BBS9Q3SYG4 887 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 SUPT20HL1Q3ZLR7 823 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 SLC45A4Q5BKX6 768 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 C6orf163Q5TEZ5 329 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 NPNTQ6UXI9 565 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 SATL1Q86VE3 508 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 KIAA0319LQ8IZA0 1049 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 SCYL3Q8IZE3 742 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 UBA3Q8TBC4 463 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 FNDC8Q8TC99 324 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 COPS5Q92905 334 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 GPRASP2Q96D09 838 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 TEX13BQ9BXU2 312 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 ACAD9Q9H845 621 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 KIAA1586Q9HCI6 787 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 PIM2Q9P1W9 311 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 HMGXB4Q9UGU5 601 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 CROTQ9UKG9 612 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 SYNPO2Q9UMS6 1093 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 AFG3L2Q9Y4W6 797 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 NR2E3Q9Y5X4 410 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 USP34Q70CQ2 3546 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 MAGEB3O15480 346 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 GSC2O15499 205 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 LIASO43766 372 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 RNASEH1O60930 286 aaKnown RBP5.22□□□□□ -1.57
SSR1-202ENST00000397511 CBFA2T3O75081 653 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 TMEM191BP0C7N4 346 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 CDK4P11802 303 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 UBA1P22314 1058 aaKnown RBP5.22□□□□□ -1.57
SSR1-202ENST00000397511 IL1R2P27930 398 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 STAT5BP51692 787 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 CLCN3P51790 818 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 GEMIN4P57678 1058 aaKnown RBP5.22□□□□□ -1.57
SSR1-202ENST00000397511 COG7P83436 770 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 OTUD4Q01804 1114 aaKnown RBP5.22□□□□□ -1.57
SSR1-202ENST00000397511 MMRN1Q13201 1228 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 MOGSQ13724 837 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 THOC5Q13769 683 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms