RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 CES2O00748 559 aa28.79■■■□□ 2.2
CPNE1-203ENST00000397442 ATF6P18850 670 aa28.79■■■□□ 2.2
CPNE1-203ENST00000397442 TFE3P19532 575 aaPredicted RBP28.79■■■□□ 2.2
CPNE1-203ENST00000397442 SDC4P31431 198 aa28.79■■■□□ 2.2
CPNE1-203ENST00000397442 MATKP42679 507 aa28.79■■■□□ 2.2
CPNE1-203ENST00000397442 CAPZA3Q96KX2 299 aa28.79■■■□□ 2.2
CPNE1-203ENST00000397442 POPDC2Q9HBU9 364 aa28.79■■■□□ 2.2
CPNE1-203ENST00000397442 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP28.79■■■□□ 2.2
CPNE1-203ENST00000397442 CHD7Q9P2D1 2997 aa28.79■■■□□ 2.2
CPNE1-203ENST00000397442 PLXNA3P51805 1871 aa28.78■■■□□ 2.2
CPNE1-203ENST00000397442 H0YGN5 161 aa28.78■■■□□ 2.2
CPNE1-203ENST00000397442 LTFP02788 710 aa28.78■■■□□ 2.2
CPNE1-203ENST00000397442 CNPP09543 421 aaKnown RBP28.78■■■□□ 2.2
CPNE1-203ENST00000397442 USP46P62068 366 aa28.78■■■□□ 2.2
CPNE1-203ENST00000397442 CREMQ03060 361 aa28.78■■■□□ 2.2
CPNE1-203ENST00000397442 WHAMMP3Q1A5X7 153 aa28.78■■■□□ 2.2
CPNE1-203ENST00000397442 RHOT1Q8IXI2 618 aa28.78■■■□□ 2.2
CPNE1-203ENST00000397442 PBKQ96KB5 322 aa28.78■■■□□ 2.2
CPNE1-203ENST00000397442 CARD9Q9H257 536 aa28.78■■■□□ 2.2
CPNE1-203ENST00000397442 MTUS1Q9ULD2 1270 aa28.78■■■□□ 2.2
CPNE1-203ENST00000397442 IRAK3Q9Y616 596 aa28.78■■■□□ 2.2
CPNE1-203ENST00000397442 MYO16Q9Y6X6 1858 aa28.78■■■□□ 2.2
CPNE1-203ENST00000397442 PDE2AO00408 941 aaPredicted RBP28.77■■■□□ 2.2
CPNE1-203ENST00000397442 PSTPIP1O43586 416 aa28.77■■■□□ 2.2
CPNE1-203ENST00000397442 RPL10AP62906 217 aaKnown RBP28.77■■■□□ 2.2
CPNE1-203ENST00000397442 ATP11AP98196 1134 aa28.77■■■□□ 2.2
CPNE1-203ENST00000397442 SLC25A11Q02978 314 aaKnown RBP28.77■■■□□ 2.2
CPNE1-203ENST00000397442 IFRD2Q12894 506 aaPredicted RBP28.77■■■□□ 2.2
CPNE1-203ENST00000397442 SYPL2Q5VXT5 272 aa28.77■■■□□ 2.2
CPNE1-203ENST00000397442 TXNRD3NBQ6F5E7 133 aa28.77■■■□□ 2.2
CPNE1-203ENST00000397442 TMC7Q7Z402 723 aa28.77■■■□□ 2.2
CPNE1-203ENST00000397442 POF1BQ8WVV4 589 aa28.77■■■□□ 2.2
CPNE1-203ENST00000397442 CENPIQ92674 756 aaPredicted RBP28.77■■■□□ 2.2
CPNE1-203ENST00000397442 NT5C3BQ969T7 300 aa28.77■■■□□ 2.2
CPNE1-203ENST00000397442 MS4A14Q96JA4 679 aa28.77■■■□□ 2.2
CPNE1-203ENST00000397442 TCF25Q9BQ70 676 aa28.77■■■□□ 2.2
CPNE1-203ENST00000397442 ZNF638Q14966 1978 aaKnown RBP28.77■■■□□ 2.2
CPNE1-203ENST00000397442 FAM92AA1XBS5 289 aa28.77■■■□□ 2.2
CPNE1-203ENST00000397442 CXCL14O95715 111 aa28.77■■■□□ 2.2
CPNE1-203ENST00000397442 RB1P06400 928 aa28.77■■■□□ 2.2
CPNE1-203ENST00000397442 PBX2P40425 430 aa28.77■■■□□ 2.2
CPNE1-203ENST00000397442 TUFMP49411 452 aaKnown RBP28.77■■■□□ 2.2
CPNE1-203ENST00000397442 LRRC38Q5VT99 294 aa28.77■■■□□ 2.2
CPNE1-203ENST00000397442 EHD2Q9NZN4 543 aa28.77■■■□□ 2.2
CPNE1-203ENST00000397442 NAALADL1Q9UQQ1 740 aa28.77■■■□□ 2.2
CPNE1-203ENST00000397442 RNF8O76064 485 aa28.76■■■□□ 2.19
CPNE1-203ENST00000397442 IL1R2P27930 398 aa28.76■■■□□ 2.19
CPNE1-203ENST00000397442 NOS2P35228 1153 aa28.76■■■□□ 2.19
CPNE1-203ENST00000397442 PCK1P35558 622 aa28.76■■■□□ 2.19
CPNE1-203ENST00000397442 SSR1P43307 286 aaKnown RBP28.76■■■□□ 2.19
CPNE1-203ENST00000397442 PGFP49763 221 aa28.76■■■□□ 2.19
CPNE1-203ENST00000397442 UBE3AQ05086 875 aa28.76■■■□□ 2.19
CPNE1-203ENST00000397442 CDO1Q16878 200 aa28.76■■■□□ 2.19
CPNE1-203ENST00000397442 DCAF6Q58WW2 860 aa28.76■■■□□ 2.19
CPNE1-203ENST00000397442 OTUD1Q5VV17 481 aaPredicted RBP28.76■■■□□ 2.19
CPNE1-203ENST00000397442 DENND5BQ6ZUT9 1274 aa28.76■■■□□ 2.19
CPNE1-203ENST00000397442 FAM172AQ8WUF8 416 aa28.76■■■□□ 2.19
CPNE1-203ENST00000397442 NPY6RQ99463 290 aa28.76■■■□□ 2.19
CPNE1-203ENST00000397442 CALCOCO1Q9P1Z2 691 aa28.76■■■□□ 2.19
CPNE1-203ENST00000397442 SCML2Q9UQR0 700 aa28.76■■■□□ 2.19
CPNE1-203ENST00000397442 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.75■■■□□ 2.19
CPNE1-203ENST00000397442 MIPP30301 263 aa28.75■■■□□ 2.19
CPNE1-203ENST00000397442 HDAC4P56524 1084 aa28.75■■■□□ 2.19
CPNE1-203ENST00000397442 RWDD2BP57060 319 aa28.75■■■□□ 2.19
CPNE1-203ENST00000397442 PITX1P78337 314 aaPredicted RBP28.75■■■□□ 2.19
CPNE1-203ENST00000397442 CAMK1Q14012 370 aa28.75■■■□□ 2.19
CPNE1-203ENST00000397442 SLC25A52Q3SY17 297 aa28.75■■■□□ 2.19
CPNE1-203ENST00000397442 BSPRYQ5W0U4 402 aa28.75■■■□□ 2.19
CPNE1-203ENST00000397442 BNIPLQ7Z465 357 aa28.75■■■□□ 2.19
CPNE1-203ENST00000397442 SCD5Q86SK9 330 aa28.75■■■□□ 2.19
CPNE1-203ENST00000397442 TGS1Q96RS0 853 aaKnown RBP28.75■■■□□ 2.19
CPNE1-203ENST00000397442 TBCBQ99426 244 aa28.75■■■□□ 2.19
CPNE1-203ENST00000397442 CARD6Q9BX69 1037 aa28.75■■■□□ 2.19
CPNE1-203ENST00000397442 FBXO44Q9H4M3 255 aa28.75■■■□□ 2.19
CPNE1-203ENST00000397442 SMARCAL1Q9NZC9 954 aa28.75■■■□□ 2.19
CPNE1-203ENST00000397442 PYGMP11217 842 aa28.74■■■□□ 2.19
CPNE1-203ENST00000397442 ERVK-21P61565 698 aa28.74■■■□□ 2.19
CPNE1-203ENST00000397442 ZNF211Q13398 564 aaPredicted RBP28.74■■■□□ 2.19
CPNE1-203ENST00000397442 MTMR3Q13615 1198 aa28.74■■■□□ 2.19
CPNE1-203ENST00000397442 ATP13A4Q4VNC1 1196 aa28.74■■■□□ 2.19
CPNE1-203ENST00000397442 CYP4V2Q6ZWL3 525 aaPredicted RBP28.74■■■□□ 2.19
CPNE1-203ENST00000397442 RASGEF1CQ8N431 466 aa28.74■■■□□ 2.19
CPNE1-203ENST00000397442 LRRN4CLQ8ND94 238 aa28.74■■■□□ 2.19
CPNE1-203ENST00000397442 CEP295NLQ96MC4 621 aa28.74■■■□□ 2.19
CPNE1-203ENST00000397442 PEBP4Q96S96 227 aa28.74■■■□□ 2.19
CPNE1-203ENST00000397442 CYP4F11Q9HBI6 524 aa28.74■■■□□ 2.19
CPNE1-203ENST00000397442 NGRNQ9NPE2 291 aaKnown RBP28.74■■■□□ 2.19
CPNE1-203ENST00000397442 TLR9Q9NR96 1032 aa28.74■■■□□ 2.19
CPNE1-203ENST00000397442 SBDSQ9Y3A5 250 aaKnown RBP eCLIP28.74■■■□□ 2.19
CPNE1-203ENST00000397442 GRM6O15303 877 aa28.74■■■□□ 2.19
CPNE1-203ENST00000397442 CEP104O60308 925 aa28.74■■■□□ 2.19
CPNE1-203ENST00000397442 AADACL2Q6P093 401 aa28.74■■■□□ 2.19
CPNE1-203ENST00000397442 BEND5Q7L4P6 421 aa28.74■■■□□ 2.19
CPNE1-203ENST00000397442 POLNQ7Z5Q5 900 aa28.74■■■□□ 2.19
CPNE1-203ENST00000397442 TCEAL8Q8IYN2 117 aa28.74■■■□□ 2.19
CPNE1-203ENST00000397442 KATNAL2Q8IYT4 538 aa28.74■■■□□ 2.19
CPNE1-203ENST00000397442 MRPL43Q8N983 215 aaKnown RBP28.74■■■□□ 2.19
CPNE1-203ENST00000397442 GIPC2Q8TF65 315 aa28.74■■■□□ 2.19
CPNE1-203ENST00000397442 KLHL5Q96PQ7 755 aa28.74■■■□□ 2.19
CPNE1-203ENST00000397442 PBX4Q9BYU1 374 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms