RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 DEC1Q9P2X7 70 aa12.66□□□□□ -0.38
SYNE4-203ENST00000397428 TNRC6BQ9UPQ9 1833 aaKnown RBP12.66□□□□□ -0.38
SYNE4-203ENST00000397428 AKAP13Q12802 2813 aa12.66□□□□□ -0.38
SYNE4-203ENST00000397428 UBE4BO95155 1302 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 PLXND1Q9Y4D7 1925 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 TBC1D3BA6NDS4 549 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 STX6O43752 255 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 GREM1O60565 184 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 ENGP17813 658 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 HOXD12P35452 270 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 PGFP49763 221 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 AP3M2P53677 418 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 IFRD2Q12894 506 aaPredicted RBP12.65□□□□□ -0.38
SYNE4-203ENST00000397428 SEMA3BQ13214 749 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 KNOP1Q1ED39 458 aaKnown RBP12.65□□□□□ -0.38
SYNE4-203ENST00000397428 UAP1L1Q3KQV9 507 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 PREPLQ4J6C6 727 aaPredicted RBP12.65□□□□□ -0.38
SYNE4-203ENST00000397428 BTBD8Q5XKL5 378 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 UNC13DQ70J99 1090 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 PIP4P1Q86T03 277 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 BBS7Q8IWZ6 715 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 NELFCDQ8IXH7 590 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 FUKQ8N0W3 1084 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 NAT16Q8N8M0 369 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 ZMIZ2Q8NF64 920 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 PARD3BQ8TEW8 1205 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 HMGB4Q8WW32 186 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 GATA6Q92908 595 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 TNIP3Q96KP6 325 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 SPACA7Q96KW9 195 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 NUSAP1Q9BXS6 441 aaKnown RBP12.65□□□□□ -0.38
SYNE4-203ENST00000397428 SDCBP2Q9H190 292 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 CD248Q9HCU0 757 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 ZDHHC4Q9NPG8 344 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 DMAC2Q9NW81 257 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 ZMIZ1Q9ULJ6 1067 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 SLC6A14Q9UN76 642 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 CEP295Q9C0D2 2601 aa12.65□□□□□ -0.38
SYNE4-203ENST00000397428 A0A1W2PQF6 199 aa12.64□□□□□ -0.39
SYNE4-203ENST00000397428 TCRBV21S2A2A0A5A6 115 aa12.64□□□□□ -0.39
SYNE4-203ENST00000397428 TMEM8BA6NDV4 472 aa12.64□□□□□ -0.39
SYNE4-203ENST00000397428 PHACTR2O75167 634 aa12.64□□□□□ -0.39
SYNE4-203ENST00000397428 BEST1O76090 585 aa12.64□□□□□ -0.39
SYNE4-203ENST00000397428 YEATS4O95619 227 aa12.64□□□□□ -0.39
SYNE4-203ENST00000397428 GABRG2P18507 467 aa12.64□□□□□ -0.39
SYNE4-203ENST00000397428 SPINK2P20155 84 aa12.64□□□□□ -0.39
SYNE4-203ENST00000397428 ITPKAP23677 461 aa12.64□□□□□ -0.39
SYNE4-203ENST00000397428 NTSR1P30989 418 aa12.64□□□□□ -0.39
SYNE4-203ENST00000397428 CASP4P49662 377 aa12.64□□□□□ -0.39
SYNE4-203ENST00000397428 KDSRQ06136 332 aa12.64□□□□□ -0.39
SYNE4-203ENST00000397428 DUOXA1Q1HG43 343 aa12.64□□□□□ -0.39
SYNE4-203ENST00000397428 SLC36A4Q6YBV0 504 aa12.64□□□□□ -0.39
SYNE4-203ENST00000397428 NUDT18Q6ZVK8 323 aa12.64□□□□□ -0.39
SYNE4-203ENST00000397428 TRMT11Q7Z4G4 463 aaKnown RBP12.64□□□□□ -0.39
SYNE4-203ENST00000397428 FAM35AQ86V20 835 aa12.64□□□□□ -0.39
SYNE4-203ENST00000397428 PGBD3Q8N328 593 aa12.64□□□□□ -0.39
SYNE4-203ENST00000397428 DEFB124Q8NES8 71 aa12.64□□□□□ -0.39
SYNE4-203ENST00000397428 CEP76Q8TAP6 659 aa12.64□□□□□ -0.39
SYNE4-203ENST00000397428 SMARCD1Q96GM5 515 aa12.64□□□□□ -0.39
SYNE4-203ENST00000397428 SMOQ99835 787 aa12.64□□□□□ -0.39
SYNE4-203ENST00000397428 SCNM1Q9BWG6 230 aa12.64□□□□□ -0.39
SYNE4-203ENST00000397428 KLF16Q9BXK1 252 aaPredicted RBP12.64□□□□□ -0.39
SYNE4-203ENST00000397428 ADAM33Q9BZ11 813 aa12.64□□□□□ -0.39
SYNE4-203ENST00000397428 SMYD3Q9H7B4 428 aa12.64□□□□□ -0.39
SYNE4-203ENST00000397428 SLC39A2Q9NP94 309 aa12.64□□□□□ -0.39
SYNE4-203ENST00000397428 DMAP1Q9NPF5 467 aaPredicted RBP12.64□□□□□ -0.39
SYNE4-203ENST00000397428 BCCIPQ9P287 314 aaKnown RBP eCLIP12.64□□□□□ -0.39
SYNE4-203ENST00000397428 RALYQ9UKM9 306 aaKnown RBP12.64□□□□□ -0.39
SYNE4-203ENST00000397428 SH3BP1Q9Y3L3 701 aa12.64□□□□□ -0.39
SYNE4-203ENST00000397428 ZFHX4Q86UP3 3567 aa12.64□□□□□ -0.39
SYNE4-203ENST00000397428 ATP8B3O60423 1300 aa12.63□□□□□ -0.39
SYNE4-203ENST00000397428 FAM221BA6H8Z2 402 aa12.63□□□□□ -0.39
SYNE4-203ENST00000397428 TRIM24O15164 1050 aa12.63□□□□□ -0.39
SYNE4-203ENST00000397428 POLR2DO15514 142 aaKnown RBP12.63□□□□□ -0.39
SYNE4-203ENST00000397428 AP5Z1O43299 807 aa12.63□□□□□ -0.39
SYNE4-203ENST00000397428 EXOC3O60645 756 aa12.63□□□□□ -0.39
SYNE4-203ENST00000397428 VNN1O95497 513 aa12.63□□□□□ -0.39
SYNE4-203ENST00000397428 RPN1P04843 607 aaKnown RBP12.63□□□□□ -0.39
SYNE4-203ENST00000397428 SERPINF2P08697 491 aa12.63□□□□□ -0.39
SYNE4-203ENST00000397428 CASP1P29466 404 aa12.63□□□□□ -0.39
SYNE4-203ENST00000397428 SLC5A3P53794 718 aa12.63□□□□□ -0.39
SYNE4-203ENST00000397428 NCOA4Q13772 614 aa12.63□□□□□ -0.39
SYNE4-203ENST00000397428 SGSM1Q2NKQ1 1148 aa12.63□□□□□ -0.39
SYNE4-203ENST00000397428 ZNF667Q5HYK9 610 aa12.63□□□□□ -0.39
SYNE4-203ENST00000397428 LYSMD4Q5XG99 296 aa12.63□□□□□ -0.39
SYNE4-203ENST00000397428 ACOT1Q86TX2 421 aa12.63□□□□□ -0.39
SYNE4-203ENST00000397428 MIB1Q86YT6 1006 aa12.63□□□□□ -0.39
SYNE4-203ENST00000397428 SLC9A9Q8IVB4 645 aa12.63□□□□□ -0.39
SYNE4-203ENST00000397428 ZNF513Q8N8E2 541 aaPredicted RBP12.63□□□□□ -0.39
SYNE4-203ENST00000397428 TERB1Q8NA31 727 aa12.63□□□□□ -0.39
SYNE4-203ENST00000397428 ZNF396Q96N95 335 aaPredicted RBP12.63□□□□□ -0.39
SYNE4-203ENST00000397428 MED10Q9BTT4 135 aa12.63□□□□□ -0.39
SYNE4-203ENST00000397428 FBXO44Q9H4M3 255 aa12.63□□□□□ -0.39
SYNE4-203ENST00000397428 SLC32A1Q9H598 525 aa12.63□□□□□ -0.39
SYNE4-203ENST00000397428 MAGEF1Q9HAY2 307 aa12.63□□□□□ -0.39
SYNE4-203ENST00000397428 CAPN10Q9HC96 672 aa12.63□□□□□ -0.39
SYNE4-203ENST00000397428 GMIPQ9P107 970 aa12.63□□□□□ -0.39
SYNE4-203ENST00000397428 WDR35Q9P2L0 1181 aa12.63□□□□□ -0.39
SYNE4-203ENST00000397428 SPEGQ15772 3267 aa12.62□□□□□ -0.39
SYNE4-203ENST00000397428 LRRIQ3A6PVS8 624 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms