RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 CDH16O75309 829 aa11.58□□□□□ -0.55
IFT140-202ENST00000397417 MMP3P08254 477 aa11.58□□□□□ -0.55
IFT140-202ENST00000397417 HOXD13P35453 343 aa11.58□□□□□ -0.55
IFT140-202ENST00000397417 ATXN1P54253 815 aaKnown RBP11.58□□□□□ -0.55
IFT140-202ENST00000397417 SNRPFP62306 86 aaKnown RBP11.58□□□□□ -0.55
IFT140-202ENST00000397417 CDC42EP1Q00587 391 aa11.58□□□□□ -0.55
IFT140-202ENST00000397417 PLIN5Q00G26 463 aa11.58□□□□□ -0.55
IFT140-202ENST00000397417 MORC4Q8TE76 937 aa11.58□□□□□ -0.55
IFT140-202ENST00000397417 DHX33Q9H6R0 707 aaKnown RBP11.58□□□□□ -0.55
IFT140-202ENST00000397417 HMGXB4Q9UGU5 601 aa11.58□□□□□ -0.55
IFT140-202ENST00000397417 NRCAMQ92823 1304 aa11.58□□□□□ -0.56
IFT140-202ENST00000397417 F5P12259 2224 aa11.58□□□□□ -0.56
IFT140-202ENST00000397417 PIRTP0C851 137 aa11.58□□□□□ -0.56
IFT140-202ENST00000397417 AARSP49588 968 aaKnown RBP eCLIP11.58□□□□□ -0.56
IFT140-202ENST00000397417 YWHAZP63104 245 aaKnown RBP11.58□□□□□ -0.56
IFT140-202ENST00000397417 PTPN20Q4JDL3 420 aa11.58□□□□□ -0.56
IFT140-202ENST00000397417 PLEKHO2Q8TD55 490 aa11.58□□□□□ -0.56
IFT140-202ENST00000397417 ZC3H15Q8WU90 426 aaKnown RBP11.58□□□□□ -0.56
IFT140-202ENST00000397417 TFAP2BQ92481 460 aa11.58□□□□□ -0.56
IFT140-202ENST00000397417 DPF3Q92784 378 aa11.58□□□□□ -0.56
IFT140-202ENST00000397417 EXOC2Q96KP1 924 aa11.58□□□□□ -0.56
IFT140-202ENST00000397417 ASB7Q9H672 318 aa11.58□□□□□ -0.56
IFT140-202ENST00000397417 ETNK1Q9HBU6 452 aa11.58□□□□□ -0.56
IFT140-202ENST00000397417 R3HDM2Q9Y2K5 976 aaKnown RBP11.58□□□□□ -0.56
IFT140-202ENST00000397417 CBX4O00257 560 aa11.58□□□□□ -0.56
IFT140-202ENST00000397417 ALDH1A3P47895 512 aa11.58□□□□□ -0.56
IFT140-202ENST00000397417 USP10Q14694 798 aaKnown RBP11.58□□□□□ -0.56
IFT140-202ENST00000397417 TAF1BQ53T94 588 aaPredicted RBP11.58□□□□□ -0.56
IFT140-202ENST00000397417 FAM183BPQ6ZVS7 135 aa11.58□□□□□ -0.56
IFT140-202ENST00000397417 TADA2BQ86TJ2 420 aa11.58□□□□□ -0.56
IFT140-202ENST00000397417 DDX53Q86TM3 631 aaKnown RBP11.58□□□□□ -0.56
IFT140-202ENST00000397417 ATAD1Q8NBU5 361 aa11.58□□□□□ -0.56
IFT140-202ENST00000397417 MTMR14Q8NCE2 650 aa11.58□□□□□ -0.56
IFT140-202ENST00000397417 NPLOC4Q8TAT6 608 aa11.58□□□□□ -0.56
IFT140-202ENST00000397417 PPWD1Q96BP3 646 aaKnown RBP11.58□□□□□ -0.56
IFT140-202ENST00000397417 DPEP3Q9H4B8 488 aa11.58□□□□□ -0.56
IFT140-202ENST00000397417 TMEM39AQ9NV64 488 aa11.58□□□□□ -0.56
IFT140-202ENST00000397417 IL1RAPL1Q9NZN1 696 aa11.58□□□□□ -0.56
IFT140-202ENST00000397417 MYH3P11055 1940 aa11.58□□□□□ -0.56
IFT140-202ENST00000397417 ATRNL1Q5VV63 1379 aa11.58□□□□□ -0.56
IFT140-202ENST00000397417 FAM47DPA6NHR8 397 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 PPEF2O14830 753 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 GMNNO75496 209 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 SHBGP04278 402 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 BTG3Q14201 252 aaPredicted RBP11.57□□□□□ -0.56
IFT140-202ENST00000397417 KCNA10Q16322 511 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 KYAT1Q16773 422 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 FAM110CQ1W6H9 321 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 LVRNQ6Q4G3 990 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 TTC39CQ8N584 583 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 CALR3Q96L12 384 aaKnown RBP11.57□□□□□ -0.56
IFT140-202ENST00000397417 CNOT10Q9H9A5 744 aaKnown RBP11.57□□□□□ -0.56
IFT140-202ENST00000397417 UTP6Q9NYH9 597 aaKnown RBP11.57□□□□□ -0.56
IFT140-202ENST00000397417 PLK2Q9NYY3 685 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 ARHGAP28Q9P2N2 729 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 SFMBT1Q9UHJ3 866 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 TNFSF13BQ9Y275 285 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 MYH10P35580 1976 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 E5RI56 91 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 TULP2O00295 520 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 AVILO75366 819 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 SOAT2O75908 522 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 ASS1P00966 412 aaKnown RBP11.57□□□□□ -0.56
IFT140-202ENST00000397417 PRLRP16471 622 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 ALDH18A1P54886 795 aaKnown RBP11.57□□□□□ -0.56
IFT140-202ENST00000397417 COPS2P61201 443 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 BST2Q10589 180 aaKnown RBP11.57□□□□□ -0.56
IFT140-202ENST00000397417 SNX17Q15036 470 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 SH3PXD2AQ5TCZ1 1133 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 TAF2Q6P1X5 1199 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 KCNT2Q6UVM3 1135 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 CRLF3Q8IUI8 442 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 ARRDC4Q8NCT1 418 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 PTPRN2Q92932 1015 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 SCLYQ96I15 445 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 PABPC3Q9H361 631 aaKnown RBP11.57□□□□□ -0.56
IFT140-202ENST00000397417 LMO2P25791 158 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 PNPLA4P41247 253 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 STILQ15468 1287 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 POM121L1PQ3SYA9 428 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 C16orf59Q7L2K0 433 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 AFAP1L2Q8N4X5 818 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 PRELID2Q8N945 189 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 TFB1MQ8WVM0 346 aaKnown RBP11.57□□□□□ -0.56
IFT140-202ENST00000397417 CAPNS2Q96L46 248 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 EGFL8Q99944 293 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 TRIM55Q9BYV6 548 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 TRPV6Q9H1D0 765 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 CYP4F12Q9HCS2 524 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 NT5MQ9NPB1 228 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 LMCD1Q9NZU5 365 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 PCDHGC5Q9Y5F6 944 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 NHSL1Q5SYE7 1610 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 A0A0G2JLL6 359 aaPredicted RBP11.57□□□□□ -0.56
IFT140-202ENST00000397417 AGRPO00253 132 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 RPL17P18621 184 aaKnown RBP11.57□□□□□ -0.56
IFT140-202ENST00000397417 ATICP31939 592 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 RASSF2P50749 326 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 NOMO3P69849 1222 aa11.57□□□□□ -0.56
IFT140-202ENST00000397417 KLHL38Q2WGJ6 581 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms