RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 ZXDBP98169 803 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 ATP2C1P98194 919 aaPredicted RBP10.07□□□□□ -0.8
NEDD9-203ENST00000397378 MYL7Q01449 175 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 ADALQ6DHV7 355 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 CRELD2Q6UXH1 353 aaPredicted RBP10.07□□□□□ -0.8
NEDD9-203ENST00000397378 DBX2Q6ZNG2 339 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 C12orf40Q86WS4 652 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 ADGRG2Q8IZP9 1017 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 FAM184AQ8NB25 1140 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 MED8Q96G25 268 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 NAF1Q96HR8 494 aaKnown RBP10.07□□□□□ -0.8
NEDD9-203ENST00000397378 CEP295NLQ96MC4 621 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 PLIN2Q99541 437 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 ST6GALNAC4Q9H4F1 302 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 CPNE5Q9HCH3 593 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 GDAP2Q9NXN4 497 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 DDX43Q9NXZ2 648 aaKnown RBP10.07□□□□□ -0.8
NEDD9-203ENST00000397378 GMIPQ9P107 970 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 ANKMY1Q9P2S6 941 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 FTSJ1Q9UET6 329 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 GTF3C4Q9UKN8 822 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 L1RE1Q9UN81 338 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 HEMK1Q9Y5R4 338 aaPredicted RBP10.07□□□□□ -0.8
NEDD9-203ENST00000397378 KNTC1P50748 2209 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 TMEM131Q92545 1883 aa10.06□□□□□ -0.8
NEDD9-203ENST00000397378 MYLKQ15746 1914 aa10.06□□□□□ -0.8
NEDD9-203ENST00000397378 TBC1D3BA6NDS4 549 aa10.06□□□□□ -0.8
NEDD9-203ENST00000397378 LEFTY2O00292 366 aa10.06□□□□□ -0.8
NEDD9-203ENST00000397378 SLC9A3R1O14745 358 aaPredicted RBP10.06□□□□□ -0.8
NEDD9-203ENST00000397378 GABRDO14764 452 aa10.06□□□□□ -0.8
NEDD9-203ENST00000397378 BCAT2O15382 392 aaPredicted RBP10.06□□□□□ -0.8
NEDD9-203ENST00000397378 BRINP1O60477 761 aa10.06□□□□□ -0.8
NEDD9-203ENST00000397378 ACAT1P24752 427 aaKnown RBP10.06□□□□□ -0.8
NEDD9-203ENST00000397378 PCSK1P29120 753 aa10.06□□□□□ -0.8
NEDD9-203ENST00000397378 ACTN2P35609 894 aa10.06□□□□□ -0.8
NEDD9-203ENST00000397378 LHX1P48742 406 aa10.06□□□□□ -0.8
NEDD9-203ENST00000397378 SLC7A9P82251 487 aa10.06□□□□□ -0.8
NEDD9-203ENST00000397378 TARDBPQ13148 414 aaKnown RBP eCLIP10.06□□□□□ -0.8
NEDD9-203ENST00000397378 MAPK8IP2Q13387 824 aaPredicted RBP10.06□□□□□ -0.8
NEDD9-203ENST00000397378 RTP5Q14D33 572 aa10.06□□□□□ -0.8
NEDD9-203ENST00000397378 DHCR24Q15392 516 aa10.06□□□□□ -0.8
NEDD9-203ENST00000397378 PKDCCQ504Y2 493 aa10.06□□□□□ -0.8
NEDD9-203ENST00000397378 ARL6IP4Q66PJ3 421 aaKnown RBP10.06□□□□□ -0.8
NEDD9-203ENST00000397378 FAM171BQ6P995 826 aa10.06□□□□□ -0.8
NEDD9-203ENST00000397378 FILIP1Q7Z7B0 1213 aa10.06□□□□□ -0.8
NEDD9-203ENST00000397378 GPBP1Q86WP2 473 aa10.06□□□□□ -0.8
NEDD9-203ENST00000397378 SPATA2LQ8IUW3 424 aaPredicted RBP10.06□□□□□ -0.8
NEDD9-203ENST00000397378 LRRC52Q8N7C0 313 aa10.06□□□□□ -0.8
NEDD9-203ENST00000397378 SPATA17Q96L03 361 aa10.06□□□□□ -0.8
NEDD9-203ENST00000397378 FAM117AQ9C073 453 aa10.06□□□□□ -0.8
NEDD9-203ENST00000397378 NRSN2Q9GZP1 204 aa10.06□□□□□ -0.8
NEDD9-203ENST00000397378 DOPEY2Q9Y3R5 2298 aa10.06□□□□□ -0.8
NEDD9-203ENST00000397378 TEX15Q9BXT5 2789 aa10.06□□□□□ -0.8
NEDD9-203ENST00000397378 VWA3AA6NCI4 1184 aa10.05□□□□□ -0.8
NEDD9-203ENST00000397378 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.05□□□□□ -0.8
NEDD9-203ENST00000397378 TISP43B9A030 160 aa10.05□□□□□ -0.8
NEDD9-203ENST00000397378 SCAMP3O14828 347 aaKnown RBP10.05□□□□□ -0.8
NEDD9-203ENST00000397378 OLFM2O95897 454 aa10.05□□□□□ -0.8
NEDD9-203ENST00000397378 NCAM1P13591 858 aa10.05□□□□□ -0.8
NEDD9-203ENST00000397378 POLR2BP30876 1174 aaKnown RBP10.05□□□□□ -0.8
NEDD9-203ENST00000397378 PPP3CCP48454 512 aa10.05□□□□□ -0.8
NEDD9-203ENST00000397378 UCNP55089 124 aa10.05□□□□□ -0.8
NEDD9-203ENST00000397378 BNC1Q01954 994 aa10.05□□□□□ -0.8
NEDD9-203ENST00000397378 POSTNQ15063 836 aa10.05□□□□□ -0.8
NEDD9-203ENST00000397378 SF3A1Q15459 793 aaKnown RBP10.05□□□□□ -0.8
NEDD9-203ENST00000397378 RILPL1Q5EBL4 403 aa10.05□□□□□ -0.8
NEDD9-203ENST00000397378 C6orf132Q5T0Z8 1188 aa10.05□□□□□ -0.8
NEDD9-203ENST00000397378 VSTM1Q6UX27 236 aa10.05□□□□□ -0.8
NEDD9-203ENST00000397378 KIAA1324Q6UXG2 1013 aaKnown RBP10.05□□□□□ -0.8
NEDD9-203ENST00000397378 C4orf50Q6ZRC1 276 aa10.05□□□□□ -0.8
NEDD9-203ENST00000397378 OSTM1Q86WC4 334 aa10.05□□□□□ -0.8
NEDD9-203ENST00000397378 SCN4BQ8IWT1 228 aa10.05□□□□□ -0.8
NEDD9-203ENST00000397378 TOP6BLQ8N6T0 577 aa10.05□□□□□ -0.8
NEDD9-203ENST00000397378 C1orf127Q8N9H9 656 aa10.05□□□□□ -0.8
NEDD9-203ENST00000397378 KRI1Q8N9T8 703 aaKnown RBP10.05□□□□□ -0.8
NEDD9-203ENST00000397378 CXorf38Q8TB03 319 aa10.05□□□□□ -0.8
NEDD9-203ENST00000397378 KCNV2Q8TDN2 545 aa10.05□□□□□ -0.8
NEDD9-203ENST00000397378 IPO4Q8TEX9 1081 aaKnown RBP10.05□□□□□ -0.8
NEDD9-203ENST00000397378 DNASE2BQ8WZ79 361 aa10.05□□□□□ -0.8
NEDD9-203ENST00000397378 AK8Q96MA6 479 aa10.05□□□□□ -0.8
NEDD9-203ENST00000397378 TTLL2Q9BWV7 592 aa10.05□□□□□ -0.8
NEDD9-203ENST00000397378 SLC6A17Q9H1V8 727 aa10.05□□□□□ -0.8
NEDD9-203ENST00000397378 BLOC1S4Q9NUP1 217 aa10.05□□□□□ -0.8
NEDD9-203ENST00000397378 TRPM5Q9NZQ8 1165 aa10.05□□□□□ -0.8
NEDD9-203ENST00000397378 AGAP1Q9UPQ3 857 aa10.05□□□□□ -0.8
NEDD9-203ENST00000397378 A0A1B0GVT2 93 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 ADH1CP00326 375 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 ITGB3P05106 788 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 ADH5P11766 374 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 GP1BBP13224 206 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 CD6P30203 668 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 NTSR1P30989 418 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 TFAMQ00059 246 aaKnown RBP10.04□□□□□ -0.8
NEDD9-203ENST00000397378 NFATC3Q12968 1075 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 CCDC142Q17RM4 750 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 INAVAQ3KP66 663 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 TBC1D25Q3MII6 688 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 C10orf76Q5T2E6 689 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 HES3Q5TGS1 186 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 DCAF12L1Q5VU92 463 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms