RNA–Protein interactions for RNA: ENST00000397012.6

PPARG-206, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPARG, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-206ENST00000397012 CTCFP49711 727 aaPredicted RBP13.97□□□□□ -0.17
PPARG-206ENST00000397012 CDO1Q16878 200 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 SLC25A52Q3SY17 297 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 ODF2Q5BJF6 829 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 VARS2Q5ST30 1063 aaKnown RBP13.97□□□□□ -0.17
PPARG-206ENST00000397012 PM20D1Q6GTS8 502 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 EMBQ6PCB8 327 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 DRICH1Q6PGQ1 229 aaPredicted RBP13.97□□□□□ -0.17
PPARG-206ENST00000397012 VSIG1Q86XK7 387 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 DEFB106AQ8N104 65 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 FAM71BQ8TC56 605 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 NDRG1Q92597 394 aaKnown RBP13.97□□□□□ -0.17
PPARG-206ENST00000397012 RHOBTB2Q9BYZ6 727 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 GPR62Q9BZJ7 368 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 ULBP1Q9BZM6 244 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 NGRNQ9NPE2 291 aaKnown RBP13.97□□□□□ -0.17
PPARG-206ENST00000397012 FAM53CQ9NYF3 392 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 HCSTQ9UBK5 93 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 KIAA0100Q14667 2235 aaKnown RBP13.97□□□□□ -0.17
PPARG-206ENST00000397012 SF3B1O75533 1304 aaKnown RBP eCLIP13.97□□□□□ -0.17
PPARG-206ENST00000397012 ABHD14A-ACY1A0A1B0GW23 586 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 SASH3O75995 380 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 EFEMP2O95967 443 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 ECHS1P30084 290 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 CDR1P51861 262 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 ELAVL2Q12926 359 aaKnown RBP13.97□□□□□ -0.17
PPARG-206ENST00000397012 BHLHA9Q7RTU4 235 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 HDXQ7Z353 690 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 NECAB2Q7Z6G3 386 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 GSPT2Q8IYD1 628 aaKnown RBP13.97□□□□□ -0.17
PPARG-206ENST00000397012 CCDC105Q8IYK2 499 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 DCP1BQ8IZD4 617 aaKnown RBP13.97□□□□□ -0.17
PPARG-206ENST00000397012 IRGQQ8WZA9 623 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 CAVIN3Q969G5 261 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 NPY6RQ99463 290 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 TRIM51Q9BSJ1 452 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 POPDC2Q9HBU9 364 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 FEZ2Q9UHY8 353 aaPredicted RBP13.97□□□□□ -0.17
PPARG-206ENST00000397012 RASAL2Q9UJF2 1139 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 NFU1Q9UMS0 254 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 USP3Q9Y6I4 520 aa13.97□□□□□ -0.17
PPARG-206ENST00000397012 TRIM43BA6NCK2 446 aa13.96□□□□□ -0.17
PPARG-206ENST00000397012 ZBED1O96006 694 aa13.96□□□□□ -0.17
PPARG-206ENST00000397012 FYNP06241 537 aa13.96□□□□□ -0.17
PPARG-206ENST00000397012 CD48P09326 243 aa13.96□□□□□ -0.17
PPARG-206ENST00000397012 ITGB8P26012 769 aa13.96□□□□□ -0.17
PPARG-206ENST00000397012 KCNJ1P48048 391 aa13.96□□□□□ -0.17
PPARG-206ENST00000397012 PDK2Q15119 407 aa13.96□□□□□ -0.17
PPARG-206ENST00000397012 FAM171A1Q5VUB5 890 aa13.96□□□□□ -0.17
PPARG-206ENST00000397012 FUT10Q6P4F1 479 aa13.96□□□□□ -0.17
PPARG-206ENST00000397012 BBS12Q6ZW61 710 aa13.96□□□□□ -0.17
PPARG-206ENST00000397012 SPATA2LQ8IUW3 424 aaPredicted RBP13.96□□□□□ -0.17
PPARG-206ENST00000397012 KCTD6Q8NC69 237 aa13.96□□□□□ -0.17
PPARG-206ENST00000397012 ATL2Q8NHH9 583 aa13.96□□□□□ -0.17
PPARG-206ENST00000397012 IFT81Q8WYA0 676 aa13.96□□□□□ -0.17
PPARG-206ENST00000397012 ATG4AQ8WYN0 398 aa13.96□□□□□ -0.17
PPARG-206ENST00000397012 TOP1MTQ969P6 601 aa13.96□□□□□ -0.17
PPARG-206ENST00000397012 TRIM43Q96BQ3 446 aaPredicted RBP13.96□□□□□ -0.17
PPARG-206ENST00000397012 FUBP3Q96I24 572 aaKnown RBP eCLIP13.96□□□□□ -0.17
PPARG-206ENST00000397012 FAM114A2Q9NRY5 505 aa13.96□□□□□ -0.17
PPARG-206ENST00000397012 YJEFN3A6XGL0 299 aa13.95□□□□□ -0.18
PPARG-206ENST00000397012 ZNF487B1APH4 448 aa13.95□□□□□ -0.18
PPARG-206ENST00000397012 E7ENQ6 273 aa13.95□□□□□ -0.18
PPARG-206ENST00000397012 DAPK3O43293 454 aa13.95□□□□□ -0.18
PPARG-206ENST00000397012 TBC1D4O60343 1298 aa13.95□□□□□ -0.18
PPARG-206ENST00000397012 RABGGTBP53611 331 aa13.95□□□□□ -0.18
PPARG-206ENST00000397012 BCAR1P56945 870 aa13.95□□□□□ -0.18
PPARG-206ENST00000397012 NNTQ13423 1086 aa13.95□□□□□ -0.18
PPARG-206ENST00000397012 CASP8Q14790 479 aa13.95□□□□□ -0.18
PPARG-206ENST00000397012 NFE2Q16621 373 aaPredicted RBP13.95□□□□□ -0.18
PPARG-206ENST00000397012 OTUD1Q5VV17 481 aaPredicted RBP13.95□□□□□ -0.18
PPARG-206ENST00000397012 KAZNQ674X7 775 aa13.95□□□□□ -0.18
PPARG-206ENST00000397012 HFE2Q6ZVN8 426 aa13.95□□□□□ -0.18
PPARG-206ENST00000397012 SYDE1Q6ZW31 735 aaPredicted RBP13.95□□□□□ -0.18
PPARG-206ENST00000397012 GRK7Q8WTQ7 553 aa13.95□□□□□ -0.18
PPARG-206ENST00000397012 HSPH1Q92598 858 aa13.95□□□□□ -0.18
PPARG-206ENST00000397012 FAM149B1Q96BN6 582 aa13.95□□□□□ -0.18
PPARG-206ENST00000397012 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.95□□□□□ -0.18
PPARG-206ENST00000397012 CALCOCO1Q9P1Z2 691 aa13.95□□□□□ -0.18
PPARG-206ENST00000397012 OR6C75A6NL08 312 aa13.95□□□□□ -0.18
PPARG-206ENST00000397012 TNFRSF10BO14763 440 aa13.95□□□□□ -0.18
PPARG-206ENST00000397012 ECEL1O95672 775 aa13.95□□□□□ -0.18
PPARG-206ENST00000397012 SLC39A12Q504Y0 691 aa13.95□□□□□ -0.18
PPARG-206ENST00000397012 DCAF6Q58WW2 860 aa13.95□□□□□ -0.18
PPARG-206ENST00000397012 ERMARDQ5T6L9 678 aa13.95□□□□□ -0.18
PPARG-206ENST00000397012 SCYL2Q6P3W7 929 aa13.95□□□□□ -0.18
PPARG-206ENST00000397012 DDX42Q86XP3 938 aaKnown RBP eCLIP13.95□□□□□ -0.18
PPARG-206ENST00000397012 ZNF689Q96CS4 500 aaPredicted RBP13.95□□□□□ -0.18
PPARG-206ENST00000397012 SNRNP25Q9BV90 132 aaKnown RBP13.95□□□□□ -0.18
PPARG-206ENST00000397012 FRMD8P1Q9BZ68 369 aaPredicted RBP13.95□□□□□ -0.18
PPARG-206ENST00000397012 CWH43Q9H720 699 aa13.95□□□□□ -0.18
PPARG-206ENST00000397012 VIPAS39Q9H9C1 493 aa13.95□□□□□ -0.18
PPARG-206ENST00000397012 STAP1Q9ULZ2 295 aa13.95□□□□□ -0.18
PPARG-206ENST00000397012 DRG1Q9Y295 367 aaKnown RBP13.95□□□□□ -0.18
PPARG-206ENST00000397012 NEU2Q9Y3R4 380 aa13.95□□□□□ -0.18
PPARG-206ENST00000397012 LIASO43766 372 aa13.94□□□□□ -0.18
PPARG-206ENST00000397012 LTFP02788 710 aa13.94□□□□□ -0.18
PPARG-206ENST00000397012 OR4Q2P0C623 313 aa13.94□□□□□ -0.18
PPARG-206ENST00000397012 USP17L7P0C7H9 530 aa13.94□□□□□ -0.18
PPARG-206ENST00000397012 IL4RP24394 825 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms