RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 H2AFVQ71UI9 128 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 GPR141Q7Z602 305 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 TTC7BQ86TV6 843 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 LCORLQ8N3X6 602 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 SH3RF3Q8TEJ3 882 aaPredicted RBP10.06□□□□□ -0.8
CDRT1-204ENST00000395906 C7orf26Q96N11 449 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 CSRNP1Q96S65 589 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 MRPL9Q9BYD2 267 aaKnown RBP10.06□□□□□ -0.8
CDRT1-204ENST00000395906 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.06□□□□□ -0.8
CDRT1-204ENST00000395906 KCNK13Q9HB14 408 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 MTMR7Q9Y216 660 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 LRP5O75197 1615 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 KLRG2A4D1S0 409 aaPredicted RBP10.05□□□□□ -0.8
CDRT1-204ENST00000395906 FAM172BPA6NC97 362 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 J3QRK9 145 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 CCNT2O60583 730 aaKnown RBP10.05□□□□□ -0.8
CDRT1-204ENST00000395906 CA4P22748 312 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 ANXA13P27216 316 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 DSTNP60981 165 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 ESRRGP62508 458 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 PTK2Q05397 1052 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 DGKDQ16760 1214 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 RABGAP1LQ5R372 815 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 PPP4R4Q6NUP7 873 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 TBC1D10CQ8IV04 446 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 GALNT6Q8NCL4 622 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 FBXL8Q96CD0 374 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 DBNDD1Q9H9R9 158 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 NINJ2Q9NZG7 142 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 ARMCX1Q9P291 453 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 SEPT3Q9UH03 358 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 PCDHA12Q9UN75 941 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 CPQQ9Y646 472 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 B4E1Z4 1266 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 KLHL41O60662 606 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 SEC24DO94855 1032 aaPredicted RBP10.05□□□□□ -0.8
CDRT1-204ENST00000395906 BMP10O95393 424 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 GGPS1O95749 300 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 TPTEP56180 551 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 PEX3P56589 373 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 C19orf57Q0VDD7 668 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 CTTNQ14247 550 aaKnown RBP10.05□□□□□ -0.8
CDRT1-204ENST00000395906 ZBED5Q49AG3 693 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 RHBDF2Q6PJF5 856 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 TMC5Q6UXY8 1006 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 ZNF571Q7Z3V5 609 aaPredicted RBP10.05□□□□□ -0.8
CDRT1-204ENST00000395906 CCDC105Q8IYK2 499 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 SLC15A4Q8N697 577 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 NPLOC4Q8TAT6 608 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 MASTLQ96GX5 879 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 ACAP3Q96P50 834 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 ALPK1Q96QP1 1244 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 SLC2A11Q9BYW1 496 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 NMUR2Q9GZQ4 415 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 GMIPQ9P107 970 aa10.05□□□□□ -0.8
CDRT1-204ENST00000395906 FLT1P17948 1338 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 SYNGAP1Q96PV0 1343 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 ANKRD31Q8N7Z5 1873 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 CYP2D7A0A087X1C5 515 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 ARHGAP42A6NI28 874 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 FADS2P1A8MWK0 482 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 XPO1O14980 1071 aaKnown RBP10.04□□□□□ -0.8
CDRT1-204ENST00000395906 NPR1P16066 1061 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 PRKACAP17612 351 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 ARL4CP56559 192 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 MRPS9P82933 396 aaKnown RBP10.04□□□□□ -0.8
CDRT1-204ENST00000395906 TRIP13Q15645 432 aaPredicted RBP10.04□□□□□ -0.8
CDRT1-204ENST00000395906 TBCCQ15814 346 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 NPTX1Q15818 432 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 SMU1Q2TAY7 513 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 KLHL38Q2WGJ6 581 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 RARS2Q5T160 578 aaKnown RBP10.04□□□□□ -0.8
CDRT1-204ENST00000395906 CYP4A22Q5TCH4 519 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 SLX4IPQ5VYV7 408 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 CNNM4Q6P4Q7 775 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 DPP8Q6V1X1 898 aaPredicted RBP10.04□□□□□ -0.8
CDRT1-204ENST00000395906 RALGPS2Q86X27 583 aaPredicted RBP10.04□□□□□ -0.8
CDRT1-204ENST00000395906 TMEM126BQ8IUX1 230 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 ELMOD2Q8IZ81 293 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 RTKN2Q8IZC4 609 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 Q8N9G6 341 aaPredicted RBP10.04□□□□□ -0.8
CDRT1-204ENST00000395906 TTC13Q8NBP0 860 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 RASSF5Q8WWW0 418 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 HSPH1Q92598 858 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 KRT35Q92764 455 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 ZNF512BQ96KM6 892 aaPredicted RBP10.04□□□□□ -0.8
CDRT1-204ENST00000395906 HERC2P3Q9BVR0 1158 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 DCLK3Q9C098 648 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 MAGEF1Q9HAY2 307 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 PCDH12Q9NPG4 1184 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.04□□□□□ -0.8
CDRT1-204ENST00000395906 IL20Q9NYY1 176 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 PI4KBQ9UBF8 816 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 ARPP21Q9UBL0 812 aaPredicted RBP10.04□□□□□ -0.8
CDRT1-204ENST00000395906 H7C0C1 242 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 MYCP01106 439 aaPredicted RBP10.04□□□□□ -0.8
CDRT1-204ENST00000395906 ITIH2P19823 946 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 BMPR1AP36894 532 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 GTF2IP78347 998 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 ZNF211Q13398 564 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms