RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 DEPDC7Q96QD5 511 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 ZNF577Q9BSK1 485 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 WDR6Q9NNW5 1121 aaKnown RBP11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 TAS2R1Q9NYW7 299 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 IGKV6D-41A0A0C4DH26 115 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 CCDC162PA2VCL2 907 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 C2CD2LO14523 706 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 FOXD2O60548 495 aaPredicted RBP11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 TOM1L1O75674 476 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 BAIAP3O94812 1187 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 DSG3P32926 999 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 ALDH1A3P47895 512 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 ANO4Q32M45 955 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 TTC33Q6PID6 262 aaPredicted RBP11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 GPRC5AQ8NFJ5 357 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 PPP4R1Q8TF05 950 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 ZNF75CPQ92670 426 aaPredicted RBP11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 HDAC2Q92769 488 aaKnown RBP11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 RMND5BQ96G75 393 aaPredicted RBP11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 PPP1R10Q96QC0 940 aaKnown RBP11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 ZFYVE28Q9HCC9 887 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 ARPC4-TTLL3A0A0A6YYG9 625 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 MANSC4A6NHS7 340 aaPredicted RBP11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 ARHGEF9O43307 516 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 B3GALNT1O75752 331 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 TRIM16O95361 564 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 FDFT1P37268 417 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 RRP1BQ14684 758 aaKnown RBP11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 ARID3BQ8IVW6 561 aaPredicted RBP11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 CHST13Q8NET6 341 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 SLC7A6OSQ96CW6 309 aaPredicted RBP11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 SNF8Q96H20 258 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 TEPSINQ96N21 525 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 MMP19Q99542 508 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 H7C0C1 242 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 EPHB6O15197 1021 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 EDF1O60869 148 aaKnown RBP11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 INHBAP08476 426 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 XRCC5P13010 732 aaKnown RBP11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 PLCG1P19174 1290 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 HSPA13P48723 471 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 BLVRAP53004 296 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 CETN1Q12798 172 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 ORC2Q13416 577 aaPredicted RBP11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 BAATQ14032 418 aaPredicted RBP11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 PKN1Q16512 942 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 NIPAL1Q6NVV3 410 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 AAGABQ6PD74 315 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 ELMSAN1Q6PJG2 1045 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 CCDC81Q6ZN84 652 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 WDR11Q9BZH6 1224 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 TAGLN3Q9UI15 199 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 PPM1HQ9ULR3 514 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 DNM3Q9UQ16 869 aa11.76□□□□□ -0.53
RAPGEF3-202ENST00000395358 LPXNO60711 386 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 CSPG5O95196 566 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 TTC4O95801 387 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 DLATP10515 647 aaKnown RBP11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 RPS6P62753 249 aaKnown RBP11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 ATG16L1Q676U5 607 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 STXBP4Q6ZWJ1 553 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 KBTBD2Q8IY47 623 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 JADE3Q92613 823 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 AK8Q96MA6 479 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 GBA3Q9H227 469 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 USP29Q9HBJ7 922 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 MYRFQ9Y2G1 1151 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 F8W8V4 182 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 PABPC1P11940 636 aaKnown RBP11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 COL6A2P12110 1019 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 PRELPP51888 382 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 STXBP2Q15833 593 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 PPP6R3Q5H9R7 873 aaPredicted RBP11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 DLK2Q6UY11 383 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 C4orf22Q6V702 233 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 OTOAQ7RTW8 1153 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 TLK2Q86UE8 772 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 TCAIMQ8N3R3 496 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 KRT35Q92764 455 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 TBC1D14Q9P2M4 693 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 NEU2Q9Y3R4 380 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 KDM3AQ9Y4C1 1321 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 COL4A1P02462 1669 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 TMEM114B3SHH9 223 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 FARP2O94887 1054 aaPredicted RBP11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 PRKACAP17612 351 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 FOXN2P32314 431 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 CDK16Q00536 496 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 MYLK3Q32MK0 819 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 XKR5Q6UX68 686 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 NCSTNQ92542 709 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 OXNAD1Q96HP4 312 aaPredicted RBP11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 KCNK16Q96T55 309 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 CCSER2Q9H7U1 834 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 STK17AQ9UEE5 414 aa11.75□□□□□ -0.53
RAPGEF3-202ENST00000395358 KIAA0391O15091 583 aaKnown RBP11.74□□□□□ -0.53
RAPGEF3-202ENST00000395358 CYP26A1O43174 497 aa11.74□□□□□ -0.53
RAPGEF3-202ENST00000395358 MYO1DO94832 1006 aa11.74□□□□□ -0.53
RAPGEF3-202ENST00000395358 GALCP54803 685 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms