RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 PLA2G4CQ9UP65 541 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 PTPRJQ12913 1337 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 SRRM3A6NNA2 597 aaPredicted RBP13.74□□□□□ -0.21
NFKB1-202ENST00000394820 PRR5-ARHGAP8B1AHC4 643 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 ADM5C9JUS6 153 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 GSC2O15499 205 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 LIASO43766 372 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 EXTL3O43909 919 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 DDNO94850 711 aaPredicted RBP13.74□□□□□ -0.21
NFKB1-202ENST00000394820 CALB1P05937 261 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 C6orf222P0C671 652 aaPredicted RBP13.74□□□□□ -0.21
NFKB1-202ENST00000394820 GM2AP17900 193 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 SP100P23497 879 aaPredicted RBP13.74□□□□□ -0.21
NFKB1-202ENST00000394820 MAPK10P53779 464 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 ARHGAP8P85298 464 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 ANO4Q32M45 955 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 HABP4Q5JVS0 413 aaKnown RBP13.74□□□□□ -0.21
NFKB1-202ENST00000394820 VWA5B1Q5TIE3 1220 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 RIPOR1Q6ZS17 1223 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 DEFB107AQ8IZN7 70 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 RYBPQ8N488 228 aaPredicted RBP13.74□□□□□ -0.21
NFKB1-202ENST00000394820 R3HDMLQ9H3Y0 253 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 CISHQ9NSE2 258 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 UGT1A9O60656 530 aa13.73□□□□□ -0.21
NFKB1-202ENST00000394820 PDGFRBP09619 1106 aa13.73□□□□□ -0.21
NFKB1-202ENST00000394820 FDX1P10109 184 aa13.73□□□□□ -0.21
NFKB1-202ENST00000394820 ART3Q13508 389 aa13.73□□□□□ -0.21
NFKB1-202ENST00000394820 CNGA3Q16281 694 aa13.73□□□□□ -0.21
NFKB1-202ENST00000394820 MAP7D3Q8IWC1 876 aa13.73□□□□□ -0.21
NFKB1-202ENST00000394820 STRA6Q9BX79 667 aa13.73□□□□□ -0.21
NFKB1-202ENST00000394820 KLC2Q9H0B6 622 aa13.73□□□□□ -0.21
NFKB1-202ENST00000394820 UGT1A7Q9HAW7 530 aa13.73□□□□□ -0.21
NFKB1-202ENST00000394820 UGT1A10Q9HAW8 530 aa13.73□□□□□ -0.21
NFKB1-202ENST00000394820 UGT1A8Q9HAW9 530 aa13.73□□□□□ -0.21
NFKB1-202ENST00000394820 TAS2R1Q9NYW7 299 aa13.73□□□□□ -0.21
NFKB1-202ENST00000394820 MTO1Q9Y2Z2 717 aaKnown RBP13.73□□□□□ -0.21
NFKB1-202ENST00000394820 SPDYE16A6NNV3 312 aaPredicted RBP13.73□□□□□ -0.21
NFKB1-202ENST00000394820 DCXO43602 365 aa13.73□□□□□ -0.21
NFKB1-202ENST00000394820 SLC4A1P02730 911 aa13.73□□□□□ -0.21
NFKB1-202ENST00000394820 HNRNPCP07910 306 aaKnown RBP eCLIP13.73□□□□□ -0.21
NFKB1-202ENST00000394820 ADORA2BP29275 332 aa13.73□□□□□ -0.21
NFKB1-202ENST00000394820 PKNOX1P55347 436 aa13.73□□□□□ -0.21
NFKB1-202ENST00000394820 RIPK1Q13546 671 aa13.73□□□□□ -0.21
NFKB1-202ENST00000394820 C4orf50Q6ZRC1 276 aa13.73□□□□□ -0.21
NFKB1-202ENST00000394820 SYDE1Q6ZW31 735 aaPredicted RBP13.73□□□□□ -0.21
NFKB1-202ENST00000394820 ZBTB8OSQ8IWT0 167 aa13.73□□□□□ -0.21
NFKB1-202ENST00000394820 EXD1Q8NHP7 514 aa13.73□□□□□ -0.21
NFKB1-202ENST00000394820 JOSD2Q8TAC2 188 aa13.73□□□□□ -0.21
NFKB1-202ENST00000394820 ZSCAN18Q8TBC5 510 aaPredicted RBP13.73□□□□□ -0.21
NFKB1-202ENST00000394820 SREK1Q8WXA9 508 aaKnown RBP13.73□□□□□ -0.21
NFKB1-202ENST00000394820 LRCH1Q9Y2L9 728 aa13.73□□□□□ -0.21
NFKB1-202ENST00000394820 STARD13Q9Y3M8 1113 aa13.73□□□□□ -0.21
NFKB1-202ENST00000394820 V9GYQ6 96 aa13.73□□□□□ -0.21
NFKB1-202ENST00000394820 CST3P01034 146 aaPredicted RBP13.72□□□□□ -0.21
NFKB1-202ENST00000394820 LINGO3P0C6S8 592 aa13.72□□□□□ -0.21
NFKB1-202ENST00000394820 CCNFP41002 786 aa13.72□□□□□ -0.21
NFKB1-202ENST00000394820 CLCN3P51790 818 aa13.72□□□□□ -0.21
NFKB1-202ENST00000394820 DSG1Q02413 1049 aa13.72□□□□□ -0.21
NFKB1-202ENST00000394820 POU5F1BQ06416 359 aa13.72□□□□□ -0.21
NFKB1-202ENST00000394820 TMEM62Q0P6H9 643 aa13.72□□□□□ -0.21
NFKB1-202ENST00000394820 NFIL3Q16649 462 aa13.72□□□□□ -0.21
NFKB1-202ENST00000394820 MSS51Q4VC12 460 aa13.72□□□□□ -0.21
NFKB1-202ENST00000394820 MFSD5Q6N075 450 aa13.72□□□□□ -0.21
NFKB1-202ENST00000394820 ANKRD36BP1Q96IX9 119 aa13.72□□□□□ -0.21
NFKB1-202ENST00000394820 IL1RL2Q9HB29 575 aa13.72□□□□□ -0.21
NFKB1-202ENST00000394820 AKT3Q9Y243 479 aa13.72□□□□□ -0.21
NFKB1-202ENST00000394820 ASMTLO95671 621 aa13.72□□□□□ -0.21
NFKB1-202ENST00000394820 SNRPAP09012 282 aaKnown RBP13.72□□□□□ -0.21
NFKB1-202ENST00000394820 LCP1P13796 627 aa13.72□□□□□ -0.21
NFKB1-202ENST00000394820 OSBPP22059 807 aa13.72□□□□□ -0.21
NFKB1-202ENST00000394820 GPC3P51654 580 aa13.72□□□□□ -0.21
NFKB1-202ENST00000394820 MYBPC2Q14324 1141 aa13.72□□□□□ -0.21
NFKB1-202ENST00000394820 KRT80Q6KB66 452 aa13.72□□□□□ -0.21
NFKB1-202ENST00000394820 TAS1R3Q7RTX0 852 aa13.72□□□□□ -0.21
NFKB1-202ENST00000394820 RBM15BQ8NDT2 890 aaKnown RBP13.72□□□□□ -0.21
NFKB1-202ENST00000394820 OR6B3Q8NGW1 331 aa13.72□□□□□ -0.21
NFKB1-202ENST00000394820 FAM136AQ96C01 138 aa13.72□□□□□ -0.21
NFKB1-202ENST00000394820 UBP1Q9NZI7 540 aa13.72□□□□□ -0.21
NFKB1-202ENST00000394820 MAGEA13PA6NCF6 341 aa13.72□□□□□ -0.21
NFKB1-202ENST00000394820 FBXO16Q8IX29 292 aaPredicted RBP13.72□□□□□ -0.21
NFKB1-202ENST00000394820 NLGN2Q8NFZ4 835 aa13.72□□□□□ -0.21
NFKB1-202ENST00000394820 ADAM32Q8TC27 787 aa13.72□□□□□ -0.21
NFKB1-202ENST00000394820 UTP4Q969X6 686 aaKnown RBP13.72□□□□□ -0.21
NFKB1-202ENST00000394820 ZNF184Q99676 751 aaPredicted RBP13.72□□□□□ -0.21
NFKB1-202ENST00000394820 FERMT1Q9BQL6 677 aa13.72□□□□□ -0.21
NFKB1-202ENST00000394820 APOBEC3GQ9HC16 384 aaKnown RBP13.72□□□□□ -0.21
NFKB1-202ENST00000394820 HESX1Q9UBX0 185 aa13.72□□□□□ -0.21
NFKB1-202ENST00000394820 COL4A5P29400 1685 aa13.72□□□□□ -0.21
NFKB1-202ENST00000394820 KRT7P08729 469 aa13.71□□□□□ -0.21
NFKB1-202ENST00000394820 UBA1P22314 1058 aaKnown RBP13.71□□□□□ -0.21
NFKB1-202ENST00000394820 NME3Q13232 169 aa13.71□□□□□ -0.21
NFKB1-202ENST00000394820 SLC12A1Q13621 1099 aa13.71□□□□□ -0.21
NFKB1-202ENST00000394820 CDKL2Q92772 493 aa13.71□□□□□ -0.21
NFKB1-202ENST00000394820 SLITRK1Q96PX8 696 aa13.71□□□□□ -0.21
NFKB1-202ENST00000394820 SYT11Q9BT88 431 aa13.71□□□□□ -0.21
NFKB1-202ENST00000394820 LZTS1Q9Y250 596 aa13.71□□□□□ -0.21
NFKB1-202ENST00000394820 FGFR3P22607 806 aa13.71□□□□□ -0.21
NFKB1-202ENST00000394820 NUDT2P50583 147 aa13.71□□□□□ -0.21
NFKB1-202ENST00000394820 DUOXA2Q1HG44 320 aa13.71□□□□□ -0.21
NFKB1-202ENST00000394820 CGB2Q6NT52 195 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms