RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 ZDHHC14Q8IZN3 488 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 EBF2Q9HAK2 575 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 PDP2Q9P2J9 529 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 MICAL2O94851 1124 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 CLCN3P51790 818 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 COPAP53621 1224 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 LRRC36Q1X8D7 754 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 ANGEL2Q5VTE6 544 aaKnown RBP12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 METTL7BQ6UX53 244 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 GSDMBQ8TAX9 411 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 ZNF516Q92618 1163 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 PHACTR1Q9C0D0 580 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 FAM49AQ9H0Q0 323 aaPredicted RBP12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 SLC17A7Q9P2U7 560 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 DDX60LQ5H9U9 1706 aaKnown RBP12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 KCNA2P16389 499 aa12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 ATP6V1C1P21283 382 aa12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 TGM2P21980 687 aa12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 KPNA2P52292 529 aaKnown RBP12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 SH2D4BQ5SQS7 431 aa12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 NAIF1Q69YI7 327 aaPredicted RBP12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 IRGCQ6NXR0 463 aa12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 ICA1LQ8NDH6 482 aa12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 CPT1BQ92523 772 aa12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 ATXN7L3BQ96GX2 97 aa12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 KCNK4Q9NYG8 393 aa12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 PPME1Q9Y570 386 aa12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 SPATA31C2B4DYI2 1134 aa12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 CHADO15335 359 aa12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 CNTFP26441 200 aa12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 ATICP31939 592 aa12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 ARL1P40616 181 aaPredicted RBP12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 CCNA1P78396 465 aa12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 DSG1Q02413 1049 aa12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 DYNC1I2Q13409 638 aaKnown RBP12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 ZBTB41Q5SVQ8 909 aa12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 SLC39A4Q6P5W5 647 aa12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 UNC45BQ8IWX7 931 aa12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 TTC8Q8TAM2 541 aa12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 KCNK16Q96T55 309 aa12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 SSU72Q9NP77 194 aaKnown RBP12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 COL24A1Q17RW2 1714 aa12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 ACKR2O00590 384 aa12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 PSMG1O95456 288 aa12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 STAG3L1P0CL83 205 aa12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 KLRC2P26717 231 aa12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 SCG3Q8WXD2 468 aaKnown RBP12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 CORO1CQ9ULV4 474 aaPredicted RBP12.1□□□□□ -0.47
UBE2D3-209ENST00000394804 COL4A1P02462 1669 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 TCRBV9S1A1TA0A576 114 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 TRDMT1O14717 391 aaKnown RBP12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 MAGEB2O15479 319 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 APOEP02649 317 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 FDFT1P37268 417 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 IREB2P48200 963 aaKnown RBP12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 MPP2Q14168 576 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 ARL13BQ3SXY8 428 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 PTPN20Q4JDL3 420 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 ADGRD1Q6QNK2 874 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 HACE1Q8IYU2 909 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 JOSD2Q8TAC2 188 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 LRRC39Q96DD0 335 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 TBCBQ99426 244 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 MMP19Q99542 508 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 TRIM56Q9BRZ2 755 aaKnown RBP12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 VPS33BQ9H267 617 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 DNAJC16Q9Y2G8 782 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 HUS1O60921 280 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 CNTN2Q02246 1040 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 TRIP10Q15642 601 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 UBAP2Q5T6F2 1119 aaKnown RBP12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 AGR3Q8TD06 166 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 FBXO6Q9NRD1 293 aaPredicted RBP12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 RIPK3Q9Y572 518 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 ANKRD31Q8N7Z5 1873 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 VNN1O95497 513 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 HMGCRP04035 888 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 POLBP06746 335 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 TGFB3P10600 412 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 CCNB1P14635 433 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 UBA1P22314 1058 aaKnown RBP12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 SLC18A1P54219 525 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.09□□□□□ -0.476e-7■■■■□ 24.1
UBE2D3-209ENST00000394804 NPNTQ6UXI9 565 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 RELL1Q8IUW5 271 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 RFWD2Q8NHY2 731 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 TFB1MQ8WVM0 346 aaKnown RBP12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 ERAP1Q9NZ08 941 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 ZNF212Q9UDV6 495 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 CDY2AQ9Y6F7 541 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 CDY1Q9Y6F8 540 aa12.09□□□□□ -0.47
UBE2D3-209ENST00000394804 LOC100653049A0A140TA62 436 aa12.08□□□□□ -0.47
UBE2D3-209ENST00000394804 FAM237BA0A1B0GVD1 139 aa12.08□□□□□ -0.47
UBE2D3-209ENST00000394804 KIF3CO14782 793 aa12.08□□□□□ -0.47
UBE2D3-209ENST00000394804 LIN7AO14910 233 aaPredicted RBP12.08□□□□□ -0.47
UBE2D3-209ENST00000394804 FKBP6O75344 327 aa12.08□□□□□ -0.47
UBE2D3-209ENST00000394804 LRCH4O75427 683 aa12.08□□□□□ -0.47
UBE2D3-209ENST00000394804 CRCPO75575 148 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms