RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 SMAPO00193 183 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 NDC80O14777 642 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 PRPSAP2O60256 369 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 MCF2P10911 925 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 KRT3P12035 628 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 CDK16Q00536 496 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 OCRLQ01968 901 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 CYLC2Q14093 348 aaPredicted RBP9.16□□□□□ -0.94
RTN4-206ENST00000394611 RPS6KA2Q15349 733 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 AMHR2Q16671 573 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 WDR72Q3MJ13 1102 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 LIN52Q52LA3 116 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 CDCA2Q69YH5 1023 aaPredicted RBP9.16□□□□□ -0.94
RTN4-206ENST00000394611 CGB2Q6NT52 195 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 ZNF572Q7Z3I7 529 aaPredicted RBP9.16□□□□□ -0.94
RTN4-206ENST00000394611 SPATA6LQ8N4H0 392 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 EMID1Q96A84 441 aaPredicted RBP9.16□□□□□ -0.94
RTN4-206ENST00000394611 ADARB2Q9NS39 739 aaKnown RBP9.16□□□□□ -0.94
RTN4-206ENST00000394611 UBP1Q9NZI7 540 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 STRIP2Q9ULQ0 834 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 A0A0A6YYK5 440 aaPredicted RBP9.15□□□□□ -0.94
RTN4-206ENST00000394611 DDTLA6NHG4 134 aaPredicted RBP9.15□□□□□ -0.94
RTN4-206ENST00000394611 C9JVG2 144 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 BOLA2-SMG1P6H3BVE0 249 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 GGPS1O95749 300 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 CYP3A4P08684 503 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 BCAR1P56945 870 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 ESRRGP62508 458 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 ROR1Q01973 937 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 CAV1Q03135 178 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 PDK3Q15120 406 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 ANGEL2Q5VTE6 544 aaKnown RBP9.15□□□□□ -0.94
RTN4-206ENST00000394611 PCDH20Q8N6Y1 951 aaKnown RBP9.15□□□□□ -0.94
RTN4-206ENST00000394611 FAM20AQ96MK3 541 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 PGLYRP2Q96PD5 576 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 RIOX1Q9H6W3 641 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 M0QYV0 167 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 KRT38O76015 456 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 MT-ND1P03886 318 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 ADSLP30566 484 aaPredicted RBP9.15□□□□□ -0.94
RTN4-206ENST00000394611 TMED10P49755 219 aaKnown RBP9.15□□□□□ -0.94
RTN4-206ENST00000394611 CDH8P55286 799 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 CDC16Q13042 620 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 NEDD8Q15843 81 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 SPDYE2Q495Y8 402 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 PRAMEF18Q5VWM3 479 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 CDAN1Q8IWY9 1227 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.15□□□□□ -0.94
RTN4-206ENST00000394611 MTMR14Q8NCE2 650 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 MAGEC3Q8TD91 643 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 PPP1R13LQ8WUF5 828 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 RNF34Q969K3 372 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 CATSPER2Q96P56 530 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 ADPGKQ9BRR6 497 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 CYP4F12Q9HCS2 524 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 PFDN4Q9NQP4 134 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 FAM198AQ9UFP1 575 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 STARD13Q9Y3M8 1113 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 MYH1P12882 1939 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 MYH4Q9Y623 1939 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 ZNF536O15090 1300 aa9.15□□□□□ -0.94
RTN4-206ENST00000394611 POLR2AP24928 1970 aaKnown RBP9.15□□□□□ -0.95
RTN4-206ENST00000394611 FSCN2O14926 492 aa9.15□□□□□ -0.95
RTN4-206ENST00000394611 QARSP47897 775 aaKnown RBP9.15□□□□□ -0.95
RTN4-206ENST00000394611 GDF10P55107 478 aa9.15□□□□□ -0.95
RTN4-206ENST00000394611 AP1B1Q10567 949 aa9.15□□□□□ -0.95
RTN4-206ENST00000394611 PLEKHG4Q58EX7 1191 aa9.15□□□□□ -0.95
RTN4-206ENST00000394611 RARS2Q5T160 578 aaKnown RBP9.15□□□□□ -0.95
RTN4-206ENST00000394611 JADE1Q6IE81 842 aa9.15□□□□□ -0.95
RTN4-206ENST00000394611 CLVS1Q8IUQ0 354 aaPredicted RBP9.15□□□□□ -0.95
RTN4-206ENST00000394611 MCOLN2Q8IZK6 566 aa9.15□□□□□ -0.95
RTN4-206ENST00000394611 NRG4Q8WWG1 115 aa9.15□□□□□ -0.95
RTN4-206ENST00000394611 GLT8D2Q9H1C3 349 aa9.15□□□□□ -0.95
RTN4-206ENST00000394611 XPNPEP1Q9NQW7 623 aa9.15□□□□□ -0.95
RTN4-206ENST00000394611 AAASQ9NRG9 546 aa9.15□□□□□ -0.95
RTN4-206ENST00000394611 GGA3Q9NZ52 723 aa9.15□□□□□ -0.95
RTN4-206ENST00000394611 GRID1Q9ULK0 1009 aa9.15□□□□□ -0.95
RTN4-206ENST00000394611 ZHX2Q9Y6X8 837 aa9.15□□□□□ -0.95
RTN4-206ENST00000394611 ECM29Q5VYK3 1845 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 TCRBV7S3A2A0A539 114 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 ZC3H11AO75152 810 aaKnown RBP eCLIP9.14□□□□□ -0.951e-32■■■■□ 22.5
RTN4-206ENST00000394611 CD48P09326 243 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 EEF1DP29692 281 aaKnown RBP9.14□□□□□ -0.95
RTN4-206ENST00000394611 NCKAP1LP55160 1127 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 FNBP1LQ5T0N5 605 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 PLEKHA7Q6IQ23 1121 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 UNC5BQ8IZJ1 945 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 SLC7A6OSQ96CW6 309 aaPredicted RBP9.14□□□□□ -0.95
RTN4-206ENST00000394611 RMDN3Q96TC7 470 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 KCNH7Q9NS40 1196 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 FZD1Q9UP38 647 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 STXBP5LQ9Y2K9 1186 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 SCINQ9Y6U3 715 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 DYTNA2CJ06 578 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.14□□□□□ -0.95
RTN4-206ENST00000394611 DNALI1O14645 258 aaPredicted RBP9.14□□□□□ -0.95
RTN4-206ENST00000394611 TAF5Q15542 800 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 PERM1Q5SV97 790 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 LPCAT2Q7L5N7 544 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 TRIM42Q8IWZ5 723 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms