RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 GINM1Q9NU53 330 aa19.61■□□□□ 0.73
HOXC6-202ENST00000394331 COQ4Q9Y3A0 265 aa19.61■□□□□ 0.73
HOXC6-202ENST00000394331 DTNAQ9Y4J8 743 aa19.61■□□□□ 0.73
HOXC6-202ENST00000394331 GOLGA8IPA6NC78 632 aa19.6■□□□□ 0.73
HOXC6-202ENST00000394331 GOLGA8JA6NMD2 632 aa19.6■□□□□ 0.73
HOXC6-202ENST00000394331 CYP26A1O43174 497 aa19.6■□□□□ 0.73
HOXC6-202ENST00000394331 DNAJA2O60884 412 aa19.6■□□□□ 0.73
HOXC6-202ENST00000394331 MYCLP12524 364 aaPredicted RBP19.6■□□□□ 0.73
HOXC6-202ENST00000394331 PHBP35232 272 aa19.6■□□□□ 0.73
HOXC6-202ENST00000394331 CDK9P50750 372 aaKnown RBP19.6■□□□□ 0.73
HOXC6-202ENST00000394331 PDIA2Q13087 525 aaKnown RBP19.6■□□□□ 0.73
HOXC6-202ENST00000394331 DMP1Q13316 513 aaPredicted RBP19.6■□□□□ 0.73
HOXC6-202ENST00000394331 KLHL38Q2WGJ6 581 aa19.6■□□□□ 0.73
HOXC6-202ENST00000394331 CBWD2Q8IUF1 395 aa19.6■□□□□ 0.73
HOXC6-202ENST00000394331 MAP4K3Q8IVH8 894 aa19.6■□□□□ 0.73
HOXC6-202ENST00000394331 NIM1KQ8IY84 436 aa19.6■□□□□ 0.73
HOXC6-202ENST00000394331 BTBD6Q96KE9 485 aa19.6■□□□□ 0.73
HOXC6-202ENST00000394331 EIF2AQ9BY44 585 aaKnown RBP19.6■□□□□ 0.73
HOXC6-202ENST00000394331 MRPL1Q9BYD6 325 aaKnown RBP19.6■□□□□ 0.73
HOXC6-202ENST00000394331 TMEM8AQ9HCN3 771 aa19.6■□□□□ 0.73
HOXC6-202ENST00000394331 RSL24D1Q9UHA3 163 aaKnown RBP19.6■□□□□ 0.73
HOXC6-202ENST00000394331 FAM170AA1A519 330 aa19.6■□□□□ 0.73
HOXC6-202ENST00000394331 VCPP55072 806 aaKnown RBP19.6■□□□□ 0.73
HOXC6-202ENST00000394331 LRRC36Q1X8D7 754 aa19.6■□□□□ 0.73
HOXC6-202ENST00000394331 OLFML1Q6UWY5 402 aa19.6■□□□□ 0.73
HOXC6-202ENST00000394331 SLC25A41Q8N5S1 370 aa19.6■□□□□ 0.73
HOXC6-202ENST00000394331 TMEM161BQ8NDZ6 487 aa19.6■□□□□ 0.73
HOXC6-202ENST00000394331 TMC2Q8TDI7 906 aa19.6■□□□□ 0.73
HOXC6-202ENST00000394331 COX4I2Q96KJ9 171 aa19.6■□□□□ 0.73
HOXC6-202ENST00000394331 RMDN3Q96TC7 470 aa19.6■□□□□ 0.73
HOXC6-202ENST00000394331 PDCD2LQ9BRP1 358 aa19.6■□□□□ 0.73
HOXC6-202ENST00000394331 C6orf203Q9P0P8 240 aaPredicted RBP19.6■□□□□ 0.73
HOXC6-202ENST00000394331 RABGEF1Q9UJ41 708 aa19.6■□□□□ 0.73
HOXC6-202ENST00000394331 FAM237BA0A1B0GVD1 139 aa19.59■□□□□ 0.73
HOXC6-202ENST00000394331 TMEM150BA6NC51 233 aa19.59■□□□□ 0.73
HOXC6-202ENST00000394331 WNT10BO00744 389 aa19.59■□□□□ 0.73
HOXC6-202ENST00000394331 SERPINA6P08185 405 aa19.59■□□□□ 0.73
HOXC6-202ENST00000394331 GPC3P51654 580 aa19.59■□□□□ 0.73
HOXC6-202ENST00000394331 ZNF772Q68DY9 489 aaPredicted RBP19.59■□□□□ 0.73
HOXC6-202ENST00000394331 SNX27Q96L92 541 aa19.59■□□□□ 0.73
HOXC6-202ENST00000394331 NT5C1BQ96P26 610 aa19.59■□□□□ 0.73
HOXC6-202ENST00000394331 UBAP1Q9NZ09 502 aa19.59■□□□□ 0.73
HOXC6-202ENST00000394331 PPARGC1AQ9UBK2 798 aaKnown RBP19.59■□□□□ 0.73
HOXC6-202ENST00000394331 SHOC2Q9UQ13 582 aa19.59■□□□□ 0.73
HOXC6-202ENST00000394331 DCAF8L1A6NGE4 600 aa19.59■□□□□ 0.73
HOXC6-202ENST00000394331 NPTX2P47972 431 aa19.59■□□□□ 0.73
HOXC6-202ENST00000394331 XRRA1Q6P2D8 792 aa19.59■□□□□ 0.73
HOXC6-202ENST00000394331 PRPF39Q86UA1 669 aaKnown RBP19.59■□□□□ 0.73
HOXC6-202ENST00000394331 CCDC127Q96BQ5 260 aa19.59■□□□□ 0.73
HOXC6-202ENST00000394331 APOPT1Q96IL0 206 aa19.59■□□□□ 0.73
HOXC6-202ENST00000394331 OSBPL6Q9BZF3 934 aa19.59■□□□□ 0.73
HOXC6-202ENST00000394331 FAM32AQ9Y421 112 aaKnown RBP19.59■□□□□ 0.73
HOXC6-202ENST00000394331 CCNE2O96020 404 aa19.58■□□□□ 0.73
HOXC6-202ENST00000394331 FMO1Q01740 532 aa19.58■□□□□ 0.73
HOXC6-202ENST00000394331 KDSRQ06136 332 aa19.58■□□□□ 0.73
HOXC6-202ENST00000394331 DRICH1Q6PGQ1 229 aaPredicted RBP19.58■□□□□ 0.73
HOXC6-202ENST00000394331 POTEHQ6S545 545 aa19.58■□□□□ 0.73
HOXC6-202ENST00000394331 SLC47A2Q86VL8 602 aa19.58■□□□□ 0.73
HOXC6-202ENST00000394331 CATSPER1Q8NEC5 780 aa19.58■□□□□ 0.73
HOXC6-202ENST00000394331 SLC26A7Q8TE54 656 aa19.58■□□□□ 0.73
HOXC6-202ENST00000394331 PYROXD1Q8WU10 500 aa19.58■□□□□ 0.73
HOXC6-202ENST00000394331 SEMA4DQ92854 862 aa19.58■□□□□ 0.73
HOXC6-202ENST00000394331 FBP2O00757 339 aa19.58■□□□□ 0.73
HOXC6-202ENST00000394331 TPD52L2O43399 206 aaKnown RBP19.58■□□□□ 0.73
HOXC6-202ENST00000394331 FDX1P10109 184 aa19.58■□□□□ 0.73
HOXC6-202ENST00000394331 CYP11B1P15538 503 aa19.58■□□□□ 0.73
HOXC6-202ENST00000394331 NUP107P57740 925 aa19.58■□□□□ 0.73
HOXC6-202ENST00000394331 FASTKD3Q14CZ7 662 aaKnown RBP19.58■□□□□ 0.73
HOXC6-202ENST00000394331 PLA2G4FQ68DD2 849 aa19.58■□□□□ 0.73
HOXC6-202ENST00000394331 FBXL13Q8NEE6 735 aa19.58■□□□□ 0.73
HOXC6-202ENST00000394331 RIN3Q8TB24 985 aa19.58■□□□□ 0.73
HOXC6-202ENST00000394331 TCHPQ9BT92 498 aa19.58■□□□□ 0.73
HOXC6-202ENST00000394331 ACSS3Q9H6R3 686 aa19.58■□□□□ 0.73
HOXC6-202ENST00000394331 KMT5AQ9NQR1 393 aa19.58■□□□□ 0.73
HOXC6-202ENST00000394331 PXMP2Q9NR77 195 aa19.58■□□□□ 0.73
HOXC6-202ENST00000394331 SF3B1O75533 1304 aaKnown RBP eCLIP19.58■□□□□ 0.72
HOXC6-202ENST00000394331 DENND3A2RUS2 1198 aa19.58■□□□□ 0.72
HOXC6-202ENST00000394331 HSPA13P48723 471 aa19.58■□□□□ 0.72
HOXC6-202ENST00000394331 HIRAP54198 1017 aaPredicted RBP19.58■□□□□ 0.72
HOXC6-202ENST00000394331 MYBPC1Q00872 1141 aa19.58■□□□□ 0.72
HOXC6-202ENST00000394331 SLC18A2Q05940 514 aa19.58■□□□□ 0.72
HOXC6-202ENST00000394331 HSF5Q4G112 596 aaPredicted RBP19.58■□□□□ 0.72
HOXC6-202ENST00000394331 ARHGEF16Q5VV41 709 aa19.58■□□□□ 0.72
HOXC6-202ENST00000394331 ARMCX6Q7L4S7 300 aa19.58■□□□□ 0.72
HOXC6-202ENST00000394331 SCAIQ8N9R8 606 aa19.58■□□□□ 0.72
HOXC6-202ENST00000394331 HELQQ8TDG4 1101 aa19.58■□□□□ 0.72
HOXC6-202ENST00000394331 DCUN1D1Q96GG9 259 aa19.58■□□□□ 0.72
HOXC6-202ENST00000394331 NTPCRQ9BSD7 190 aaKnown RBP19.58■□□□□ 0.72
HOXC6-202ENST00000394331 C2orf71A6NGG8 1288 aa19.57■□□□□ 0.72
HOXC6-202ENST00000394331 ITM2AO43736 263 aa19.57■□□□□ 0.72
HOXC6-202ENST00000394331 LPXNO60711 386 aa19.57■□□□□ 0.72
HOXC6-202ENST00000394331 DKC1O60832 514 aaKnown RBP eCLIP19.57■□□□□ 0.72
HOXC6-202ENST00000394331 TSHRP16473 764 aa19.57■□□□□ 0.72
HOXC6-202ENST00000394331 ZNF12P17014 697 aa19.57■□□□□ 0.72
HOXC6-202ENST00000394331 PDAP1Q13442 181 aaKnown RBP19.57■□□□□ 0.72
HOXC6-202ENST00000394331 TRMT1LQ7Z2T5 733 aaKnown RBP19.57■□□□□ 0.72
HOXC6-202ENST00000394331 MFSD14AQ96MC6 490 aa19.57■□□□□ 0.72
HOXC6-202ENST00000394331 FBXL18Q96ME1 805 aa19.57■□□□□ 0.72
HOXC6-202ENST00000394331 HAUS8Q9BT25 410 aa19.57■□□□□ 0.72
HOXC6-202ENST00000394331 CHORDC1Q9UHD1 332 aaPredicted RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms