RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 PSMA2P25787 234 aa25.44■■□□□ 1.66
LRFN4-202ENST00000393952 CASQ1P31415 396 aa25.44■■□□□ 1.66
LRFN4-202ENST00000393952 YWHAZP63104 245 aaKnown RBP25.44■■□□□ 1.66
LRFN4-202ENST00000393952 PDE12Q6L8Q7 609 aaKnown RBP25.44■■□□□ 1.66
LRFN4-202ENST00000393952 PEX26Q7Z412 305 aa25.44■■□□□ 1.66
LRFN4-202ENST00000393952 NT5DC3Q86UY8 548 aa25.44■■□□□ 1.66
LRFN4-202ENST00000393952 FNIP1Q8TF40 1166 aa25.44■■□□□ 1.66
LRFN4-202ENST00000393952 NAPGQ99747 312 aaPredicted RBP25.44■■□□□ 1.66
LRFN4-202ENST00000393952 SCML2Q9UQR0 700 aa25.44■■□□□ 1.66
LRFN4-202ENST00000393952 COL4A4P53420 1690 aaPredicted RBP25.44■■□□□ 1.66
LRFN4-202ENST00000393952 LAMA3Q16787 3333 aa25.44■■□□□ 1.66
LRFN4-202ENST00000393952 DAB1O75553 588 aa25.44■■□□□ 1.66
LRFN4-202ENST00000393952 RTN3O95197 1032 aaPredicted RBP25.44■■□□□ 1.66
LRFN4-202ENST00000393952 GLI1P08151 1106 aa25.44■■□□□ 1.66
LRFN4-202ENST00000393952 YWHAQP27348 245 aa25.44■■□□□ 1.66
LRFN4-202ENST00000393952 ALDH1A3P47895 512 aa25.44■■□□□ 1.66
LRFN4-202ENST00000393952 TWF1Q12792 350 aa25.44■■□□□ 1.66
LRFN4-202ENST00000393952 ARCQ7LC44 396 aa25.44■■□□□ 1.66
LRFN4-202ENST00000393952 DEFB106AQ8N104 65 aa25.44■■□□□ 1.66
LRFN4-202ENST00000393952 CEP295NLQ96MC4 621 aa25.44■■□□□ 1.66
LRFN4-202ENST00000393952 FBXO44Q9H4M3 255 aa25.44■■□□□ 1.66
LRFN4-202ENST00000393952 PACSIN2Q9UNF0 486 aaPredicted RBP25.44■■□□□ 1.66
LRFN4-202ENST00000393952 JRKLQ9Y4A0 524 aa25.44■■□□□ 1.66
LRFN4-202ENST00000393952 LTFP02788 710 aa25.43■■□□□ 1.66
LRFN4-202ENST00000393952 ATP1A1P05023 1023 aaKnown RBP25.43■■□□□ 1.66
LRFN4-202ENST00000393952 CLCN4P51793 760 aa25.43■■□□□ 1.66
LRFN4-202ENST00000393952 ZNF143P52747 638 aaPredicted RBP25.43■■□□□ 1.66
LRFN4-202ENST00000393952 DNTTIP2Q5QJE6 756 aaKnown RBP25.43■■□□□ 1.66
LRFN4-202ENST00000393952 MEI1Q5TIA1 1274 aa25.43■■□□□ 1.66
LRFN4-202ENST00000393952 DAB2IPQ5VWQ8 1189 aa25.43■■□□□ 1.66
LRFN4-202ENST00000393952 KREMEN2Q8NCW0 462 aa25.43■■□□□ 1.66
LRFN4-202ENST00000393952 SLC7A14Q8TBB6 771 aa25.43■■□□□ 1.66
LRFN4-202ENST00000393952 CFAP57Q96MR6 1250 aa25.43■■□□□ 1.66
LRFN4-202ENST00000393952 SLC2A13Q96QE2 648 aa25.43■■□□□ 1.66
LRFN4-202ENST00000393952 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.43■■□□□ 1.66
LRFN4-202ENST00000393952 LCMT1Q9UIC8 334 aa25.43■■□□□ 1.66
LRFN4-202ENST00000393952 AMFRQ9UKV5 643 aa25.43■■□□□ 1.66
LRFN4-202ENST00000393952 USTQ9Y2C2 406 aa25.43■■□□□ 1.66
LRFN4-202ENST00000393952 MTCL1Q9Y4B5 1905 aaKnown RBP25.43■■□□□ 1.66
LRFN4-202ENST00000393952 CTAGE9A4FU28 777 aa25.42■■□□□ 1.66
LRFN4-202ENST00000393952 RFXAPO00287 272 aa25.42■■□□□ 1.66
LRFN4-202ENST00000393952 DPYSL4O14531 572 aa25.42■■□□□ 1.66
LRFN4-202ENST00000393952 SPOPO43791 374 aa25.42■■□□□ 1.66
LRFN4-202ENST00000393952 CLASP2O75122 1294 aaKnown RBP25.42■■□□□ 1.66
LRFN4-202ENST00000393952 FYNP06241 537 aa25.42■■□□□ 1.66
LRFN4-202ENST00000393952 MAN1A1P33908 653 aa25.42■■□□□ 1.66
LRFN4-202ENST00000393952 PGFP49763 221 aa25.42■■□□□ 1.66
LRFN4-202ENST00000393952 PIGHQ14442 188 aaPredicted RBP25.42■■□□□ 1.66
LRFN4-202ENST00000393952 CCDC14Q49A88 953 aa25.42■■□□□ 1.66
LRFN4-202ENST00000393952 NIPA2Q8N8Q9 360 aa25.42■■□□□ 1.66
LRFN4-202ENST00000393952 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.42■■□□□ 1.66
LRFN4-202ENST00000393952 CNPY3Q9BT09 278 aa25.42■■□□□ 1.66
LRFN4-202ENST00000393952 DDX23Q9BUQ8 820 aaKnown RBP25.42■■□□□ 1.66
LRFN4-202ENST00000393952 TLR10Q9BXR5 811 aa25.42■■□□□ 1.66
LRFN4-202ENST00000393952 LMAN2LQ9H0V9 348 aa25.42■■□□□ 1.66
LRFN4-202ENST00000393952 POPDC2Q9HBU9 364 aa25.42■■□□□ 1.66
LRFN4-202ENST00000393952 COMMD8Q9NX08 183 aa25.42■■□□□ 1.66
LRFN4-202ENST00000393952 MYO9BQ13459 2157 aa25.41■■□□□ 1.66
LRFN4-202ENST00000393952 FAM92AA1XBS5 289 aa25.41■■□□□ 1.66
LRFN4-202ENST00000393952 MATKP42679 507 aa25.41■■□□□ 1.66
LRFN4-202ENST00000393952 YWHAGP61981 247 aaKnown RBP eCLIP25.41■■□□□ 1.66
LRFN4-202ENST00000393952 C15orf59Q2T9L4 293 aaPredicted RBP25.41■■□□□ 1.66
LRFN4-202ENST00000393952 BSPRYQ5W0U4 402 aa25.41■■□□□ 1.66
LRFN4-202ENST00000393952 SCD5Q86SK9 330 aa25.41■■□□□ 1.66
LRFN4-202ENST00000393952 FBXO32Q969P5 355 aa25.41■■□□□ 1.66
LRFN4-202ENST00000393952 TTLL2Q9BWV7 592 aa25.41■■□□□ 1.66
LRFN4-202ENST00000393952 GMIPQ9P107 970 aa25.41■■□□□ 1.66
LRFN4-202ENST00000393952 MAGED2Q9UNF1 606 aaPredicted RBP25.41■■□□□ 1.66
LRFN4-202ENST00000393952 TRANK1O15050 2925 aa25.41■■□□□ 1.66
LRFN4-202ENST00000393952 PER2O15055 1255 aa25.4■■□□□ 1.66
LRFN4-202ENST00000393952 SDC4P31431 198 aa25.4■■□□□ 1.66
LRFN4-202ENST00000393952 SLC1A1P43005 524 aa25.4■■□□□ 1.66
LRFN4-202ENST00000393952 SYPL2Q5VXT5 272 aa25.4■■□□□ 1.66
LRFN4-202ENST00000393952 ADGRD2Q7Z7M1 963 aa25.4■■□□□ 1.66
LRFN4-202ENST00000393952 KIF18AQ8NI77 898 aa25.4■■□□□ 1.66
LRFN4-202ENST00000393952 EDEM1Q92611 657 aa25.4■■□□□ 1.66
LRFN4-202ENST00000393952 GOLGA1Q92805 767 aa25.4■■□□□ 1.66
LRFN4-202ENST00000393952 NMUR1Q9HB89 426 aa25.4■■□□□ 1.66
LRFN4-202ENST00000393952 NAALADL1Q9UQQ1 740 aa25.4■■□□□ 1.66
LRFN4-202ENST00000393952 A0A1W2PQH9 124 aa25.39■■□□□ 1.66
LRFN4-202ENST00000393952 C8AP07357 584 aa25.39■■□□□ 1.66
LRFN4-202ENST00000393952 CSH1P0DML2 217 aa25.39■■□□□ 1.66
LRFN4-202ENST00000393952 CSH2P0DML3 217 aa25.39■■□□□ 1.66
LRFN4-202ENST00000393952 HMGA1P17096 107 aaKnown RBP25.39■■□□□ 1.66
LRFN4-202ENST00000393952 TFE3P19532 575 aaPredicted RBP25.39■■□□□ 1.66
LRFN4-202ENST00000393952 DNA2P51530 1060 aa25.39■■□□□ 1.66
LRFN4-202ENST00000393952 EPHB3P54753 998 aa25.39■■□□□ 1.66
LRFN4-202ENST00000393952 ATP11AP98196 1134 aa25.39■■□□□ 1.66
LRFN4-202ENST00000393952 TAF10Q12962 218 aa25.39■■□□□ 1.66
LRFN4-202ENST00000393952 VEPH1Q14D04 833 aa25.39■■□□□ 1.66
LRFN4-202ENST00000393952 DCAF6Q58WW2 860 aa25.39■■□□□ 1.66
LRFN4-202ENST00000393952 SH3PXD2AQ5TCZ1 1133 aa25.39■■□□□ 1.66
LRFN4-202ENST00000393952 CC2D1AQ6P1N0 951 aaPredicted RBP25.39■■□□□ 1.66
LRFN4-202ENST00000393952 CCDC149Q6ZUS6 474 aa25.39■■□□□ 1.66
LRFN4-202ENST00000393952 SLC22A17Q8WUG5 538 aa25.39■■□□□ 1.66
LRFN4-202ENST00000393952 ADAM33Q9BZ11 813 aa25.39■■□□□ 1.66
LRFN4-202ENST00000393952 NCAM1P13591 858 aa25.39■■□□□ 1.65
LRFN4-202ENST00000393952 NOS2P35228 1153 aa25.39■■□□□ 1.65
LRFN4-202ENST00000393952 PTPN9P43378 593 aa25.39■■□□□ 1.65
LRFN4-202ENST00000393952 PITX1P78337 314 aaPredicted RBP25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms